47 |
|
#include "selection/SelectionEvaluator.hpp" |
48 |
|
#include "selection/SelectionManager.hpp" |
49 |
|
#include "utils/NumericConstant.hpp" |
50 |
+ |
#include "applications/staticProps/StaticAnalyser.hpp" |
51 |
+ |
|
52 |
|
namespace oopse { |
53 |
|
|
54 |
< |
/** |
55 |
< |
* @class RadialDistrFunc |
56 |
< |
* @brief Radial Distribution Function |
57 |
< |
*/ |
58 |
< |
class RadialDistrFunc { |
59 |
< |
public: |
60 |
< |
RadialDistrFunc(SimInfo* info, const std::string& filename, const std::string& sele1, const std::string& sele2); |
54 |
> |
/** |
55 |
> |
* @class RadialDistrFunc |
56 |
> |
* @brief Radial Distribution Function |
57 |
> |
*/ |
58 |
> |
class RadialDistrFunc : public StaticAnalyser { |
59 |
> |
public: |
60 |
> |
RadialDistrFunc(SimInfo* info, const std::string& filename, const std::string& sele1, const std::string& sele2); |
61 |
|
|
62 |
< |
virtual ~RadialDistrFunc() {} |
62 |
> |
virtual ~RadialDistrFunc() {} |
63 |
|
|
64 |
< |
void process(); |
64 |
> |
void process(); |
65 |
|
|
64 |
– |
void setOutputName(const std::string& filename) { |
65 |
– |
outputFilename_ = filename; |
66 |
– |
} |
66 |
|
|
68 |
– |
const std::string& getOutputFileName() const { |
69 |
– |
return outputFilename_; |
70 |
– |
} |
71 |
– |
|
72 |
– |
void setStep(int step) { |
73 |
– |
assert(step > 0); |
74 |
– |
step_ =step; |
75 |
– |
} |
67 |
|
|
68 |
< |
protected: |
68 |
> |
protected: |
69 |
|
|
70 |
< |
virtual void preProcess() {} |
71 |
< |
virtual void postProcess() {} |
70 |
> |
virtual void preProcess() {} |
71 |
> |
virtual void postProcess() {} |
72 |
|
|
73 |
< |
int getNPairs() { return nPairs_;} |
73 |
> |
int getNPairs() { return nPairs_;} |
74 |
|
|
75 |
< |
SimInfo* info_; |
85 |
< |
Snapshot* currentSnapshot_; |
75 |
> |
Snapshot* currentSnapshot_; |
76 |
|
|
77 |
< |
std::string dumpFilename_; |
78 |
< |
std::string outputFilename_; |
79 |
< |
int step_; |
80 |
< |
std::string selectionScript1_; |
81 |
< |
std::string selectionScript2_; |
92 |
< |
int nProcessed_; |
77 |
> |
std::string selectionScript1_; |
78 |
> |
std::string selectionScript2_; |
79 |
> |
int nProcessed_; |
80 |
> |
SelectionManager seleMan1_; |
81 |
> |
SelectionManager seleMan2_; |
82 |
|
|
83 |
< |
private: |
83 |
> |
private: |
84 |
|
|
85 |
< |
virtual void initalizeHistogram() {} |
86 |
< |
virtual void collectHistogram(StuntDouble* sd1, StuntDouble* sd2) =0; |
87 |
< |
virtual void processHistogram() = 0; |
88 |
< |
void processNonOverlapping(SelectionManager& sman1, SelectionManager& sman2); |
89 |
< |
void processOverlapping(SelectionManager& sman); |
85 |
> |
virtual void initalizeHistogram() {} |
86 |
> |
virtual void collectHistogram(StuntDouble* sd1, StuntDouble* sd2) =0; |
87 |
> |
virtual void processHistogram() {} |
88 |
> |
void processNonOverlapping(SelectionManager& sman1, SelectionManager& sman2); |
89 |
> |
void processOverlapping(SelectionManager& sman); |
90 |
|
|
91 |
< |
virtual void writeRdf() = 0; |
91 |
> |
virtual void validateSelection1(SelectionManager& sman) {} |
92 |
> |
virtual void validateSelection2(SelectionManager& sman) {} |
93 |
> |
virtual void writeRdf() = 0; |
94 |
|
|
95 |
|
|
96 |
< |
SelectionEvaluator evaluator1_; |
97 |
< |
SelectionEvaluator evaluator2_; |
107 |
< |
SelectionManager seleMan1_; |
108 |
< |
SelectionManager seleMan2_; |
109 |
< |
SelectionManager sele1_minus_common_; |
110 |
< |
SelectionManager sele2_minus_common_; |
111 |
< |
SelectionManager common_; |
112 |
< |
int nPairs_; |
113 |
< |
}; |
96 |
> |
SelectionEvaluator evaluator1_; |
97 |
> |
SelectionEvaluator evaluator2_; |
98 |
|
|
99 |
+ |
SelectionManager sele1_minus_common_; |
100 |
+ |
SelectionManager sele2_minus_common_; |
101 |
+ |
SelectionManager common_; |
102 |
+ |
int nPairs_; |
103 |
+ |
}; |
104 |
|
|
105 |
+ |
|
106 |
|
} |
107 |
|
#endif |