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root/group/trunk/OOPSE-4/src/applications/staticProps/StaticProps.ggo
Revision: 3022
Committed: Tue Sep 26 01:30:32 2006 UTC (17 years, 9 months ago) by gezelter
File size: 2961 byte(s)
Log Message:
Mostly done with BondOrderParameter.  Only a few performance tweaks
remain

File Contents

# User Rev Content
1 tim 1994 # Input file for gengetopt --generates cmdline.c and cmdline.h
2     # for parsing command line arguments useing getopt and getoptlong.
3     # gengetopt is available from:
4     # http://www.gnu.org/software/gengetopt/gengetopt.html
5 tim 1995 package "StaticProps"
6 tim 1994 version "1.00"
7    
8     # Options
9     option "input" i "input dump file" string typestr="filename" yes
10     option "output" o "output file name" string typestr="filename" no
11 tim 1995 option "step" n "process every n frame" int default="1" no
12 gezelter 3009 option "nbins" b "number of bins (general purpose)" int default="100" no
13 xsun 2763 option "nbins_x" x "number of bins in x axis" int default="100" no
14     option "nbins_y" y "number of bins in y axis" int default="100" no
15 tim 1994 option "nanglebins" a "number of bins for cos(angle)" int default="50" no
16 gezelter 3007 option "length" - "maximum length (Defaults to 1/2 smallest length of first frame)" double no
17     option "rcut" c "cutoff radius (rcut)" double no
18 gezelter 2701 option "zoffset" z "Where to set the zero for the slab_density calculation" double default="0" no
19 tim 2241 option "sele1" - "select the first stuntdouble set" string typestr="selection script" no
20     option "sele2" - "select the second stuntdouble set" string typestr="selection script" no
21     option "sele3" - "select the third stuntdouble set" string typestr="selection script" no
22     option "refsele" - "select reference (use and only use with --gxyz)" string typestr="selection script" no
23     option "molname" - "molecule name" string no
24 gezelter 3007 option "begin" - "begin internal index" int no
25 tim 2241 option "end" - "end internal index" int no
26 tim 1994 defgroup "staticProps" groupdesc=" an option of this group is required" yes
27 gezelter 3022 groupoption "bo" - "bond order parameter (--rcut must be specified" group="staticProps"
28 gezelter 3007 groupoption "gofr" g "g(r)" group="staticProps"
29     groupoption "r_theta" - "g(r, cos(theta))" group="staticProps"
30     groupoption "r_omega" - "g(r, cos(omega))" group="staticProps"
31     groupoption "theta_omega" - "g(cos(theta), cos(omega))" group="staticProps"
32     groupoption "gxyz" - "g(x, y, z)" group="staticProps"
33     groupoption "p2" p "p2 order parameter (--sele1 and --sele2 must be specified)" group="staticProps"
34     groupoption "rp2" - "rp2 order parameter (--sele1 and --sele2 must be specified)" group="staticProps"
35     groupoption "scd" s "scd order parameter (either --sele1, --sele2, --sele3 are specified or --molname, --begin, --end are specified)" group="staticProps"
36     groupoption "density" d "density plot" group="staticProps"
37     groupoption "slab_density" - "slab density" group="staticProps"
38     groupoption "hxy" - "hxy" group="staticProps"