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/* |
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File autogenerated by gengetopt version 2.15 |
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File autogenerated by gengetopt version 2.19.1 |
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generated with the following command: |
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gengetopt -i StaticProps.ggo -F StaticPropsCmd |
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gengetopt -i StaticProps.ggo -F StaticPropsCmd -u |
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The developers of gengetopt consider the fixed text that goes in all |
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gengetopt output files to be in the public domain: |
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#include "StaticPropsCmd.h" |
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|
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const char *gengetopt_args_info_purpose = ""; |
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|
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const char *gengetopt_args_info_usage = "Usage: StaticProps [OPTIONS]... [FILES]..."; |
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|
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const char *gengetopt_args_info_description = ""; |
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|
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const char *gengetopt_args_info_help[] = { |
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" -h, --help Print help and exit", |
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" -V, --version Print version and exit", |
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" -i, --input=filename input dump file", |
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" -o, --output=filename output file name", |
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" -n, --step=INT process every n frame (default=`1')", |
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" -b, --nbins=INT number of bins (general purpose) \n (default=`100')", |
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" -x, --nbins_x=INT number of bins in x axis (default=`100')", |
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" -y, --nbins_y=INT number of bins in y axis (default=`100')", |
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" -a, --nanglebins=INT number of bins for cos(angle) (default=`50')", |
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" --length=DOUBLE maximum length (Defaults to 1/2 smallest length \n of first frame)", |
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" -c, --rcut=DOUBLE cutoff radius (rcut)", |
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" -z, --zoffset=DOUBLE Where to set the zero for the slab_density \n calculation (default=`0')", |
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" --sele1=selection script select the first stuntdouble set", |
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" --sele2=selection script select the second stuntdouble set", |
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" --sele3=selection script select the third stuntdouble set", |
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" --refsele=selection script\n select reference (use and only use with --gxyz)", |
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" --molname=STRING molecule name", |
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" --begin=INT begin internal index", |
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" --end=INT end internal index", |
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" --radius=DOUBLE nanoparticle radius", |
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"\n Group: staticProps\n an option of this group is required", |
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" --bo bond order parameter (--rcut must be specified)", |
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" --bor bond order parameter as a function of radius \n (--rcut must be specified)", |
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" -g, --gofr g(r)", |
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" --r_theta g(r, cos(theta))", |
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" --r_omega g(r, cos(omega))", |
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" --theta_omega g(cos(theta), cos(omega))", |
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" --gxyz g(x, y, z)", |
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" -p, --p2 p2 order parameter (--sele1 and --sele2 must be \n specified)", |
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" --rp2 rp2 order parameter (--sele1 and --sele2 must \n be specified)", |
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" -s, --scd scd order parameter (either --sele1, --sele2, \n --sele3 are specified or --molname, --begin, \n --end are specified)", |
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" -d, --density density plot", |
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" --slab_density slab density", |
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" --hxy hxy", |
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" --rho_r rho of R", |
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0 |
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}; |
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|
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static |
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void clear_given (struct gengetopt_args_info *args_info); |
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static |
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args_info->end_given = 0 ; |
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args_info->radius_given = 0 ; |
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args_info->bo_given = 0 ; |
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args_info->bor_given = 0 ; |
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args_info->gofr_given = 0 ; |
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args_info->r_theta_given = 0 ; |
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args_info->r_omega_given = 0 ; |
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|
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} |
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|
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static |
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void init_args_info(struct gengetopt_args_info *args_info) |
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{ |
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args_info->help_help = gengetopt_args_info_help[0] ; |
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args_info->version_help = gengetopt_args_info_help[1] ; |
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args_info->input_help = gengetopt_args_info_help[2] ; |
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args_info->output_help = gengetopt_args_info_help[3] ; |
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args_info->step_help = gengetopt_args_info_help[4] ; |
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args_info->nbins_help = gengetopt_args_info_help[5] ; |
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args_info->nbins_x_help = gengetopt_args_info_help[6] ; |
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args_info->nbins_y_help = gengetopt_args_info_help[7] ; |
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args_info->nanglebins_help = gengetopt_args_info_help[8] ; |
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args_info->length_help = gengetopt_args_info_help[9] ; |
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args_info->rcut_help = gengetopt_args_info_help[10] ; |
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args_info->zoffset_help = gengetopt_args_info_help[11] ; |
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args_info->sele1_help = gengetopt_args_info_help[12] ; |
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args_info->sele2_help = gengetopt_args_info_help[13] ; |
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args_info->sele3_help = gengetopt_args_info_help[14] ; |
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args_info->refsele_help = gengetopt_args_info_help[15] ; |
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args_info->molname_help = gengetopt_args_info_help[16] ; |
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args_info->begin_help = gengetopt_args_info_help[17] ; |
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args_info->end_help = gengetopt_args_info_help[18] ; |
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args_info->radius_help = gengetopt_args_info_help[19] ; |
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args_info->bo_help = gengetopt_args_info_help[20] ; |
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args_info->bor_help = gengetopt_args_info_help[21] ; |
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args_info->gofr_help = gengetopt_args_info_help[22] ; |
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args_info->r_theta_help = gengetopt_args_info_help[23] ; |
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args_info->r_omega_help = gengetopt_args_info_help[24] ; |
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args_info->theta_omega_help = gengetopt_args_info_help[25] ; |
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args_info->gxyz_help = gengetopt_args_info_help[26] ; |
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args_info->p2_help = gengetopt_args_info_help[27] ; |
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args_info->rp2_help = gengetopt_args_info_help[28] ; |
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args_info->scd_help = gengetopt_args_info_help[29] ; |
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args_info->density_help = gengetopt_args_info_help[30] ; |
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args_info->slab_density_help = gengetopt_args_info_help[31] ; |
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args_info->hxy_help = gengetopt_args_info_help[32] ; |
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args_info->rho_r_help = gengetopt_args_info_help[33] ; |
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|
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} |
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|
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void |
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cmdline_parser_print_version (void) |
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{ |
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void |
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cmdline_parser_print_help (void) |
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{ |
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int i = 0; |
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cmdline_parser_print_version (); |
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printf("\nUsage: StaticProps [OPTIONS]...\n\n"); |
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printf("%s\n"," -h, --help Print help and exit"); |
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printf("%s\n"," -V, --version Print version and exit"); |
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printf("%s\n"," -i, --input=filename input dump file"); |
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printf("%s\n"," -o, --output=filename output file name"); |
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printf("%s\n"," -n, --step=INT process every n frame (default=`1')"); |
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printf("%s\n"," -b, --nbins=INT number of bins (general purpose) \n (default=`100')"); |
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printf("%s\n"," -x, --nbins_x=INT number of bins in x axis (default=`100')"); |
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printf("%s\n"," -y, --nbins_y=INT number of bins in y axis (default=`100')"); |
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printf("%s\n"," -a, --nanglebins=INT number of bins for cos(angle) (default=`50')"); |
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printf("%s\n"," --length=DOUBLE maximum length (Defaults to 1/2 smallest length \n of first frame)"); |
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printf("%s\n"," -c, --rcut=DOUBLE cutoff radius (rcut)"); |
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printf("%s\n"," -z, --zoffset=DOUBLE Where to set the zero for the slab_density \n calculation (default=`0')"); |
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printf("%s\n"," --sele1=selection script select the first stuntdouble set"); |
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printf("%s\n"," --sele2=selection script select the second stuntdouble set"); |
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printf("%s\n"," --sele3=selection script select the third stuntdouble set"); |
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printf("%s\n"," --refsele=selection script\n select reference (use and only use with --gxyz)"); |
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printf("%s\n"," --molname=STRING molecule name"); |
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printf("%s\n"," --begin=INT begin internal index"); |
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printf("%s\n"," --end=INT end internal index"); |
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printf("%s\n"," --radius=DOUBLE nanoparticle radius"); |
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printf("%s\n","\n Group: staticProps\n an option of this group is required"); |
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printf("%s\n"," --bo bond order parameter (--rcut must be specified"); |
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printf("%s\n"," -g, --gofr g(r)"); |
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printf("%s\n"," --r_theta g(r, cos(theta))"); |
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printf("%s\n"," --r_omega g(r, cos(omega))"); |
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printf("%s\n"," --theta_omega g(cos(theta), cos(omega))"); |
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printf("%s\n"," --gxyz g(x, y, z)"); |
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printf("%s\n"," -p, --p2 p2 order parameter (--sele1 and --sele2 must be \n specified)"); |
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printf("%s\n"," --rp2 rp2 order parameter (--sele1 and --sele2 must \n be specified)"); |
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printf("%s\n"," -s, --scd scd order parameter (either --sele1, --sele2, \n --sele3 are specified or --molname, --begin, \n --end are specified)"); |
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printf("%s\n"," -d, --density density plot"); |
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printf("%s\n"," --slab_density slab density"); |
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printf("%s\n"," --hxy hxy"); |
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printf("%s\n"," --rho_r rho of R"); |
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|
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|
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if (strlen(gengetopt_args_info_purpose) > 0) |
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printf("\n%s\n", gengetopt_args_info_purpose); |
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|
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printf("\n%s\n\n", gengetopt_args_info_usage); |
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|
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if (strlen(gengetopt_args_info_description) > 0) |
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printf("%s\n", gengetopt_args_info_description); |
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|
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while (gengetopt_args_info_help[i]) |
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printf("%s\n", gengetopt_args_info_help[i++]); |
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} |
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void |
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{ |
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clear_given (args_info); |
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clear_args (args_info); |
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init_args_info (args_info); |
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|
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args_info->inputs = NULL; |
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args_info->inputs_num = 0; |
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} |
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static void |
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cmdline_parser_release (struct gengetopt_args_info *args_info) |
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{ |
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unsigned int i; |
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if (args_info->input_arg) |
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{ |
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free (args_info->input_arg); /* free previous argument */ |
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free (args_info->radius_orig); /* free previous argument */ |
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args_info->radius_orig = 0; |
364 |
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} |
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|
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for (i = 0; i < args_info->inputs_num; ++i) |
367 |
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free (args_info->inputs [i]); |
368 |
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|
369 |
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if (args_info->inputs_num) |
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free (args_info->inputs); |
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|
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clear_given (args_info); |
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} |
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if (args_info->bo_given) { |
522 |
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fprintf(outfile, "%s\n", "bo"); |
523 |
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} |
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if (args_info->bor_given) { |
525 |
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fprintf(outfile, "%s\n", "bor"); |
526 |
+ |
} |
527 |
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if (args_info->gofr_given) { |
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fprintf(outfile, "%s\n", "gofr"); |
529 |
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} |
600 |
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return; |
601 |
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|
602 |
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args_info->bo_given = 0 ; |
603 |
+ |
args_info->bor_given = 0 ; |
604 |
|
args_info->gofr_given = 0 ; |
605 |
|
args_info->r_theta_given = 0 ; |
606 |
|
args_info->r_omega_given = 0 ; |
661 |
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{ |
662 |
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int error = 0; |
663 |
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|
664 |
+ |
/* checks for required options */ |
665 |
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if (! args_info->input_given) |
666 |
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{ |
667 |
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fprintf (stderr, "%s: '--input' ('-i') option required%s\n", prog_name, (additional_error ? additional_error : "")); |
668 |
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error = 1; |
669 |
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} |
670 |
+ |
|
671 |
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if (args_info->staticProps_group_counter == 0) |
672 |
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{ |
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fprintf (stderr, "%s: %d options of group staticProps were given. One is required.%s\n", prog_name, args_info->staticProps_group_counter, (additional_error ? additional_error : "")); |
675 |
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} |
676 |
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|
677 |
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|
678 |
+ |
/* checks for dependences among options */ |
679 |
+ |
|
680 |
|
return error; |
681 |
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} |
682 |
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|
694 |
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cmdline_parser_init (&local_args_info); |
695 |
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|
696 |
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optarg = 0; |
697 |
< |
optind = 1; |
697 |
> |
optind = 0; |
698 |
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opterr = 1; |
699 |
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optopt = '?'; |
700 |
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|
725 |
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{ "end", 1, NULL, 0 }, |
726 |
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{ "radius", 1, NULL, 0 }, |
727 |
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{ "bo", 0, NULL, 0 }, |
728 |
+ |
{ "bor", 0, NULL, 0 }, |
729 |
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{ "gofr", 0, NULL, 'g' }, |
730 |
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{ "r_theta", 0, NULL, 0 }, |
731 |
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{ "r_omega", 0, NULL, 0 }, |
1175 |
|
free (args_info->radius_orig); /* free previous string */ |
1176 |
|
args_info->radius_orig = gengetopt_strdup (optarg); |
1177 |
|
} |
1178 |
< |
/* bond order parameter (--rcut must be specified. */ |
1178 |
> |
/* bond order parameter (--rcut must be specified). */ |
1179 |
|
else if (strcmp (long_options[option_index].name, "bo") == 0) |
1180 |
|
{ |
1181 |
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if (local_args_info.bo_given) |
1187 |
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continue; |
1188 |
|
local_args_info.bo_given = 1; |
1189 |
|
args_info->bo_given = 1; |
1190 |
+ |
if (args_info->staticProps_group_counter && override) |
1191 |
+ |
reset_group_staticProps (args_info); |
1192 |
+ |
args_info->staticProps_group_counter += 1; |
1193 |
+ |
break; |
1194 |
+ |
} |
1195 |
+ |
/* bond order parameter as a function of radius (--rcut must be specified). */ |
1196 |
+ |
else if (strcmp (long_options[option_index].name, "bor") == 0) |
1197 |
+ |
{ |
1198 |
+ |
if (local_args_info.bor_given) |
1199 |
+ |
{ |
1200 |
+ |
fprintf (stderr, "%s: `--bor' option given more than once%s\n", argv[0], (additional_error ? additional_error : "")); |
1201 |
+ |
goto failure; |
1202 |
+ |
} |
1203 |
+ |
if (args_info->bor_given && ! override) |
1204 |
+ |
continue; |
1205 |
+ |
local_args_info.bor_given = 1; |
1206 |
+ |
args_info->bor_given = 1; |
1207 |
|
if (args_info->staticProps_group_counter && override) |
1208 |
|
reset_group_staticProps (args_info); |
1209 |
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args_info->staticProps_group_counter += 1; |
1375 |
|
if ( error ) |
1376 |
|
return (EXIT_FAILURE); |
1377 |
|
|
1378 |
+ |
if (optind < argc) |
1379 |
+ |
{ |
1380 |
+ |
int i = 0 ; |
1381 |
+ |
int found_prog_name = 0; |
1382 |
+ |
/* whether program name, i.e., argv[0], is in the remaining args |
1383 |
+ |
(this may happen with some implementations of getopt, |
1384 |
+ |
but surely not with the one included by gengetopt) */ |
1385 |
+ |
|
1386 |
+ |
i = optind; |
1387 |
+ |
while (i < argc) |
1388 |
+ |
if (argv[i++] == argv[0]) { |
1389 |
+ |
found_prog_name = 1; |
1390 |
+ |
break; |
1391 |
+ |
} |
1392 |
+ |
i = 0; |
1393 |
+ |
|
1394 |
+ |
args_info->inputs_num = argc - optind - found_prog_name; |
1395 |
+ |
args_info->inputs = |
1396 |
+ |
(char **)(malloc ((args_info->inputs_num)*sizeof(char *))) ; |
1397 |
+ |
while (optind < argc) |
1398 |
+ |
if (argv[optind++] != argv[0]) |
1399 |
+ |
args_info->inputs[ i++ ] = gengetopt_strdup (argv[optind-1]) ; |
1400 |
+ |
} |
1401 |
+ |
|
1402 |
|
return 0; |
1403 |
|
|
1404 |
|
failure: |