Changes for implementing Amber force field: Added Inversions and worked on BaseAtomTypes so that they'd function with the fortran side.
Adding infrastructure for Amber force field.
Adding single precision capabilities to c++ side
working version of DensityPlot
xemacs has been drafted to perform our indentation services
(1) complete section parser's error message (2) add GhostTorsion (3) accumulate inertial tensor from the directional atoms before calculate rigidbody's inertial tensor
merging new_design branch into OOPSE-2.0
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