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Comparing trunk/OOPSE/ChangeLog (file contents):
Revision 1126 by tim, Tue Apr 20 05:39:38 2004 UTC vs.
Revision 1152 by tim, Mon May 10 20:28:14 2004 UTC

# Line 1 | Line 1
1 + 2004-05-07 16:36  gezelter
2 +
3 +        * libmdtools/: fSwitchingFunction.h, switch_module.F90: New module
4 +        for fortran group-based switching function
5 +
6 + 2004-05-07 16:35  gezelter
7 +
8 +        * libmdtools/: Atom.hpp, ForceFields.cpp, Integrator.cpp,
9 +        Makefile.in, SimInfo.cpp, SimState.cpp, SimState.hpp,
10 +        calc_LJ_FF.F90, calc_charge_charge.F90, calc_dipole_dipole.F90,
11 +        calc_eam.F90, calc_gb.F90, calc_sticky_pair.F90, do_Forces.F90,
12 +        force_globals.F90, fortranWrapDefines.hpp, mpiComponentPlan.h,
13 +        mpiSimulation_module.F90, neighborLists.F90, notifyCutoffs.F90,
14 +        simulation_module.F90: Many changes to get group-based cutoffs to
15 +        work
16 +
17 + 2004-05-01 13:52  tim
18 +
19 +        * ChangeLog, libmdtools/ForceFields.cpp, libmdtools/Integrator.cpp,
20 +        libmdtools/OOPSEMinimizer.cpp, libmdtools/SimInfo.cpp,
21 +        libmdtools/SimInfo.hpp, libmdtools/calc_charge_charge.F90,
22 +        libmdtools/do_Forces.F90, libmdtools/fSimulation.h,
23 +        libmdtools/fortranWrapDefines.hpp,
24 +        libmdtools/simulation_module.F90: C++ pass groupList to fortran
25 +
26 + 2004-04-29 11:03  tim
27 +
28 +        * ChangeLog, libmdtools/calc_charge_charge.F90: fixed two bugs in
29 +        calc_charge_charge when using molecular cutoff
30 +
31 + 2004-04-28 21:11  tim
32 +
33 +        * libmdtools/: ForceFields.cpp, fortranWrapDefines.hpp: fix an
34 +        unmatched c/fortran interface
35 +
36 + 2004-04-28 18:09  tim
37 +
38 +        * ChangeLog, libmdtools/Integrator.hpp, libmdtools/ZConstraint.cpp:
39 +        keep the previous position of cantilever in SMD
40 +
41 + 2004-04-28 17:34  tim
42 +
43 +        * ChangeLog, libmdtools/Molecule.cpp, libmdtools/Molecule.hpp,
44 +        libmdtools/OtherVisitor.cpp, libmdtools/ZconsVisitor.cpp: fix a bug
45 +        in Molecule.cpp which initialize massRatio before creat the array.
46 +        fix two bugs in ZconsVisitor
47 +
48 + 2004-04-28 17:06  gezelter
49 +
50 +        * libmdtools/: MatVec3.h, SimInfo.cpp, SimInfo.hpp, SimSetup.cpp:
51 +        Adding molecular cutoffs
52 +
53 + 2004-04-28 16:39  gezelter
54 +
55 +        * libmdtools/: calc_charge_charge.F90, do_Forces.F90,
56 +        fSimulation.h, force_globals.F90, simulation_module.F90: work on
57 +        molecular cutoffs
58 +
59 + 2004-04-28 16:39  gezelter
60 +
61 +        * libBASS/: Globals.cpp, Globals.hpp: useMolecularCutoffs added to
62 +        Globals
63 +
64 + 2004-04-27 11:26  tim
65 +
66 +        * libmdtools/: Atom.cpp, Atom.hpp, DirectionalAtom.cpp,
67 +        ForceFields.cpp, Molecule.cpp, SimState.cpp, SimState.hpp,
68 +        fSimulation.h, fortranWrapDefines.hpp: add center of mass of the
69 +        molecule and massRation into atom class
70 +
71 + 2004-04-26 16:16  mmeineke
72 +
73 +        * libBASS/Globals.cpp: modified the defaults for the system init
74 +        time and system init state.
75 +
76 + 2004-04-26 09:29  gezelter
77 +
78 +        * libmdtools/: Thermo.cpp, calc_charge_charge.F90: Fixed a bug in
79 +        calc_charge_charge.F90
80 +
81 + 2004-04-23 23:31  tim
82 +
83 +        * ChangeLog, libmdtools/AtomVisitor.cpp,
84 +        libmdtools/calc_charge_charge.F90, libmdtools/do_Forces.F90: add
85 +        reaction field correction to charge-charge interaction
86 +
87 + 2004-04-22 16:33  tim
88 +
89 +        * libmdtools/: InitializeFromFile.cpp, SimInfo.cpp, SimInfo.hpp,
90 +        Thermo.cpp, calc_charge_charge.F90, do_Forces.F90: change the
91 +        calculation of pressure tensor
92 +
93 + 2004-04-22 09:55  tim
94 +
95 +        * libmdtools/: DumpReader.cpp, InitializeFromFile.cpp: fixed
96 +        another bug in InitFromFile. MPI verion of OOPSE is working again
97 +
98 + 2004-04-21 22:29  tim
99 +
100 +        * libmdtools/: AtomVisitor.cpp, DumpReader.cpp, DumpWriter.cpp,
101 +        InitializeFromFile.cpp, NPT.cpp, NVT.cpp, OtherVisitor.cpp,
102 +        SimSetup.cpp, calc_charge_charge.F90, mpiSimulation.cpp: fixed two
103 +        bugs in MPI version of InitfromFile and one unmatch MPI command in
104 +        DumpWriter
105 +
106 + 2004-04-21 00:32  tim
107 +
108 +        * libmdtools/Functor.hpp, libmdtools/LinearCons.cpp,
109 +        libmdtools/LinearCons.hpp, utils/CmdlineZsub.c,
110 +        utils/CmdlineZsub.h, utils/zsub.cpp, utils/zsub.ggo: remove some
111 +        useless files
112 +
113 + 2004-04-20 11:56  tim
114 +
115 +        * libmdtools/: Integrator.cpp, NVT.cpp, OtherVisitor.cpp,
116 +        SimInfo.cpp, Thermo.cpp, Thermo.hpp: fixed getCOMVel  and
117 +        velocitize at thermo
118 +
119 + 2004-04-20 00:39  tim
120 +
121 +        * ChangeLog, libmdtools/Atom.cpp, libmdtools/Atom.hpp,
122 +        libmdtools/AtomVisitor.cpp, libmdtools/AtomVisitor.hpp,
123 +        libmdtools/CompositeVisitor.cpp, libmdtools/CompositeVisitor.hpp,
124 +        libmdtools/DirectionalAtom.hpp, libmdtools/GenericData.hpp,
125 +        libmdtools/OtherVisitor.cpp, libmdtools/OtherVisitor.hpp,
126 +        libmdtools/RigidBodyVisitor.cpp, libmdtools/RigidBodyVisitor.hpp,
127 +        utils/Dump2XYZ.cpp, utils/Dump2XYZ.ggo, utils/Dump2XYZCmd.c,
128 +        utils/Dump2XYZCmd.h: DUMP2XYZ 0.99 version
129 +
130 + 2004-04-19 17:13  gezelter
131 +
132 +        * libmdtools/: Atom.cpp, Integrator.cpp, NVT.cpp, SimInfo.cpp,
133 +        Thermo.cpp: Fixed a charge bug
134 +
135   2004-04-19 15:54  tim
136  
137          * libmdtools/CompositeVisitor.cpp, libmdtools/CompositeVisitor.hpp,
# Line 3003 | Line 3137
3137          libmdtools/mpiSimulation.hpp, libmdtools/mpiSimulation_module.F90,
3138          libmdtools/neighborLists.F90, libmdtools/randomSPRNG.cpp,
3139          libmdtools/randomSPRNG.hpp, libmdtools/simulation_module.F90,
3140 <        libmdtools/vector_class.F90, libmdtools/wrappers.F90: Initial
3141 <        revision
3140 >        libmdtools/vector_class.F90, libmdtools/wrappers.F90: New OOPSE
3141 >        Tree
3142  
3143   2003-03-21 12:42  mmeineke
3144  
# Line 3061 | Line 3195
3195          libmdtools/mpiSimulation.hpp, libmdtools/mpiSimulation_module.F90,
3196          libmdtools/neighborLists.F90, libmdtools/randomSPRNG.cpp,
3197          libmdtools/randomSPRNG.hpp, libmdtools/simulation_module.F90,
3198 <        libmdtools/vector_class.F90, libmdtools/wrappers.F90: New OOPSE
3199 <        Tree
3198 >        libmdtools/vector_class.F90, libmdtools/wrappers.F90: Initial
3199 >        revision
3200  

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