| 1 |
#include <cstdlib> |
| 2 |
#include <cstdio> |
| 3 |
#include <cstring> |
| 4 |
|
| 5 |
#include "Globals.hpp" |
| 6 |
#include "simError.h" |
| 7 |
#ifdef IS_MPI |
| 8 |
#include "mpiBASS.h" |
| 9 |
#endif // is_mpi |
| 10 |
|
| 11 |
/* |
| 12 |
* The following section lists all of the defined tokens for the |
| 13 |
* gloabal assignment statements. All are prefixed with a G_ to avoid |
| 14 |
* stepping on any previously defined enumerations. |
| 15 |
* |
| 16 |
* NOTE: tokens start at 1, 0 is a resrved token number |
| 17 |
*/ |
| 18 |
|
| 19 |
//required parameters |
| 20 |
#define G_FORCEFIELD 1 |
| 21 |
#define G_NCOMPONENTS 2 |
| 22 |
#define G_TARGETTEMP 3 |
| 23 |
#define G_ENSEMBLE 4 |
| 24 |
#define G_DT 5 |
| 25 |
#define G_RUNTIME 6 |
| 26 |
|
| 27 |
//optional parameters |
| 28 |
#define G_INITIALCONFIG 7 |
| 29 |
#define G_FINALCONFIG 8 |
| 30 |
#define G_NMOL 9 |
| 31 |
#define G_DENSITY 10 |
| 32 |
#define G_BOX 11 |
| 33 |
#define G_BOXX 12 |
| 34 |
#define G_BOXY 13 |
| 35 |
#define G_BOXZ 14 |
| 36 |
#define G_SAMPLETIME 15 |
| 37 |
#define G_STATUSTIME 16 |
| 38 |
#define G_ECR 17 |
| 39 |
#define G_DIELECTRIC 18 |
| 40 |
#define G_TEMPSET 19 |
| 41 |
#define G_THERMALTIME 20 |
| 42 |
#define G_USEPBC 21 |
| 43 |
#define G_MIXINGRULE 22 |
| 44 |
#define G_EST 23 |
| 45 |
#define G_USERF 24 |
| 46 |
#define G_TARGETPRESSURE 25 |
| 47 |
#define G_TAUTHERMOSTAT 26 |
| 48 |
#define G_TAUBAROSTAT 27 |
| 49 |
#define G_ZCONSTIME 28 |
| 50 |
#define G_NZCONSTRAINTS 29 |
| 51 |
#define G_ZCONSTOL 30 |
| 52 |
|
| 53 |
Globals::Globals(){ |
| 54 |
|
| 55 |
int i; |
| 56 |
|
| 57 |
components = NULL; |
| 58 |
|
| 59 |
command_table = new LinkedCommand*[hash_size]; |
| 60 |
for( i=0; i<hash_size; i++ ) command_table[i] = NULL; |
| 61 |
|
| 62 |
addHash( "forceField", G_FORCEFIELD ); |
| 63 |
addHash( "nComponents", G_NCOMPONENTS ); |
| 64 |
addHash( "targetTemp", G_TARGETTEMP ); |
| 65 |
addHash( "ensemble", G_ENSEMBLE ); |
| 66 |
|
| 67 |
addHash( "dt", G_DT ); |
| 68 |
addHash( "runTime", G_RUNTIME ); |
| 69 |
|
| 70 |
addHash( "initialConfig", G_INITIALCONFIG ); |
| 71 |
addHash( "finalConfig", G_FINALCONFIG ); |
| 72 |
addHash( "nMol", G_NMOL ); |
| 73 |
addHash( "density", G_DENSITY ); |
| 74 |
addHash( "box", G_BOX ); |
| 75 |
addHash( "boxX", G_BOXX ); |
| 76 |
addHash( "boxY", G_BOXY ); |
| 77 |
addHash( "boxZ", G_BOXZ ); |
| 78 |
addHash( "sampleTime", G_SAMPLETIME ); |
| 79 |
addHash( "statusTime", G_STATUSTIME ); |
| 80 |
addHash( "electrostaticCutoffRadius", G_ECR ); |
| 81 |
addHash( "dielectric", G_DIELECTRIC ); |
| 82 |
addHash( "tempSet", G_TEMPSET ); |
| 83 |
addHash( "thermalTime", G_THERMALTIME ); |
| 84 |
addHash( "mixingRule", G_MIXINGRULE); |
| 85 |
addHash( "usePeriodicBoundaryConditions", G_USEPBC); |
| 86 |
addHash( "electrostaticSkinThickness", G_EST ); |
| 87 |
addHash( "useReactionField", G_USERF ); |
| 88 |
addHash( "targetPressure", G_TARGETPRESSURE); |
| 89 |
addHash( "tauThermostat", G_TAUTHERMOSTAT); |
| 90 |
addHash( "tauBarostat", G_TAUBAROSTAT); |
| 91 |
addHash( "zconsTime", G_ZCONSTIME); |
| 92 |
addHash( "nZconstraints", G_NZCONSTRAINTS); |
| 93 |
addHash( "zconsTol", G_ZCONSTOL); |
| 94 |
|
| 95 |
// define some default values |
| 96 |
|
| 97 |
strcpy( mixingRule,"standard"); //default mixing rules to standard. |
| 98 |
usePBC = 1; //default periodic boundry conditions to on |
| 99 |
useRF = 0; |
| 100 |
|
| 101 |
have_force_field = 0; |
| 102 |
have_n_components = 0; |
| 103 |
have_target_temp = 0; |
| 104 |
have_ensemble = 0; |
| 105 |
have_dt = 0; |
| 106 |
have_run_time = 0; |
| 107 |
|
| 108 |
have_initial_config = 0; |
| 109 |
have_final_config = 0; |
| 110 |
have_n_mol = 0; |
| 111 |
have_density = 0; |
| 112 |
have_box = 0; |
| 113 |
have_box_x = 0; |
| 114 |
have_box_y = 0; |
| 115 |
have_box_y = 0; |
| 116 |
have_box_z = 0; |
| 117 |
have_sample_time = 0; |
| 118 |
have_status_time = 0; |
| 119 |
have_thermal_time = 0; |
| 120 |
have_ecr = 0; |
| 121 |
have_dielectric = 0; |
| 122 |
have_tempSet = 0; |
| 123 |
have_est = 0; |
| 124 |
have_target_pressure =0; |
| 125 |
have_q_mass = 0; |
| 126 |
have_tau_thermostat = 0; |
| 127 |
have_tau_barostat = 0; |
| 128 |
have_zcons_time = 0; |
| 129 |
have_n_zConstraints = 0; |
| 130 |
have_zConstraints = 0; |
| 131 |
have_zcons_tol = 0; |
| 132 |
|
| 133 |
|
| 134 |
strcpy( initial_config, "./fooBar" ); |
| 135 |
|
| 136 |
} |
| 137 |
|
| 138 |
Globals::~Globals(){ |
| 139 |
int i; |
| 140 |
|
| 141 |
for( i=0; i<hash_size; i++ ){ |
| 142 |
if( command_table[i] != NULL ) delete command_table[i]; |
| 143 |
} |
| 144 |
delete[] command_table; |
| 145 |
|
| 146 |
if( components != NULL ){ |
| 147 |
for( i=0; i<n_components; i++ ) delete components[i]; |
| 148 |
delete[] components; |
| 149 |
} |
| 150 |
} |
| 151 |
|
| 152 |
int Globals::newComponent( event* the_event ){ |
| 153 |
|
| 154 |
current_component = new Component; |
| 155 |
int index = the_event->evt.blk_index; |
| 156 |
char err[200]; |
| 157 |
|
| 158 |
if( have_n_components && index < n_components ) |
| 159 |
components[index] = current_component; |
| 160 |
else{ |
| 161 |
if( have_n_components ){ |
| 162 |
sprintf( err, "Globals error, %d out of nComponents range", |
| 163 |
index ); |
| 164 |
the_event->err_msg = strdup( err ); |
| 165 |
return 0; |
| 166 |
} |
| 167 |
else{ |
| 168 |
the_event->err_msg = strdup("Globals error, nComponents not given before" |
| 169 |
"first component declaration." ); |
| 170 |
return 0; |
| 171 |
} |
| 172 |
} |
| 173 |
|
| 174 |
return 1; |
| 175 |
} |
| 176 |
|
| 177 |
|
| 178 |
|
| 179 |
int Globals::componentAssign( event* the_event ){ |
| 180 |
|
| 181 |
switch( the_event->evt.asmt.asmt_type ){ |
| 182 |
|
| 183 |
case STRING: |
| 184 |
return current_component->assignString( the_event->evt.asmt.lhs, |
| 185 |
the_event->evt.asmt.rhs.sval, |
| 186 |
&(the_event->err_msg)); |
| 187 |
break; |
| 188 |
|
| 189 |
case DOUBLE: |
| 190 |
return current_component->assignDouble( the_event->evt.asmt.lhs, |
| 191 |
the_event->evt.asmt.rhs.dval, |
| 192 |
&(the_event->err_msg)); |
| 193 |
break; |
| 194 |
|
| 195 |
case INT: |
| 196 |
return current_component->assignInt( the_event->evt.asmt.lhs, |
| 197 |
the_event->evt.asmt.rhs.ival, |
| 198 |
&(the_event->err_msg)); |
| 199 |
break; |
| 200 |
|
| 201 |
default: |
| 202 |
the_event->err_msg = strdup( "Globals error. Invalid component" |
| 203 |
" assignment type" ); |
| 204 |
return 0; |
| 205 |
break; |
| 206 |
} |
| 207 |
return 0; |
| 208 |
} |
| 209 |
|
| 210 |
int Globals::componentEnd( event* the_event ){ |
| 211 |
|
| 212 |
the_event->err_msg = current_component->checkMe(); |
| 213 |
if( the_event->err_msg != NULL ) return 0; |
| 214 |
|
| 215 |
return 1; |
| 216 |
} |
| 217 |
|
| 218 |
int Globals::newZconstraint( event* the_event ){ |
| 219 |
|
| 220 |
|
| 221 |
int index = the_event->evt.blk_index; |
| 222 |
char err[200]; |
| 223 |
current_zConstraint = new ZconStamp( index ); |
| 224 |
|
| 225 |
have_zConstraints = 1; |
| 226 |
|
| 227 |
if( have_n_zConstraints && index < n_zConstraints ) |
| 228 |
zConstraints[index] = current_zConstraint; |
| 229 |
else{ |
| 230 |
if( have_n_zConstraints ){ |
| 231 |
sprintf( err, "Globals error, %d out of nZconstraints range", |
| 232 |
index ); |
| 233 |
the_event->err_msg = strdup( err ); |
| 234 |
return 0; |
| 235 |
} |
| 236 |
else{ |
| 237 |
the_event->err_msg = strdup("Globals error, nZconstraints" |
| 238 |
" not given before" |
| 239 |
" first zConstraint declaration." ); |
| 240 |
return 0; |
| 241 |
} |
| 242 |
} |
| 243 |
|
| 244 |
return 1; |
| 245 |
} |
| 246 |
|
| 247 |
|
| 248 |
|
| 249 |
int Globals::zConstraintAssign( event* the_event ){ |
| 250 |
|
| 251 |
switch( the_event->evt.asmt.asmt_type ){ |
| 252 |
|
| 253 |
case STRING: |
| 254 |
return current_zConstraint->assignString( the_event->evt.asmt.lhs, |
| 255 |
the_event->evt.asmt.rhs.sval, |
| 256 |
&(the_event->err_msg)); |
| 257 |
break; |
| 258 |
|
| 259 |
case DOUBLE: |
| 260 |
return current_zConstraint->assignDouble( the_event->evt.asmt.lhs, |
| 261 |
the_event->evt.asmt.rhs.dval, |
| 262 |
&(the_event->err_msg)); |
| 263 |
break; |
| 264 |
|
| 265 |
case INT: |
| 266 |
return current_zConstraint->assignInt( the_event->evt.asmt.lhs, |
| 267 |
the_event->evt.asmt.rhs.ival, |
| 268 |
&(the_event->err_msg)); |
| 269 |
break; |
| 270 |
|
| 271 |
default: |
| 272 |
the_event->err_msg = strdup( "Globals error. Invalid zConstraint" |
| 273 |
" assignment type" ); |
| 274 |
return 0; |
| 275 |
break; |
| 276 |
} |
| 277 |
return 0; |
| 278 |
} |
| 279 |
|
| 280 |
int Globals::zConstraintEnd( event* the_event ){ |
| 281 |
|
| 282 |
the_event->err_msg = current_zConstraint->checkMe(); |
| 283 |
if( the_event->err_msg != NULL ) return 0; |
| 284 |
|
| 285 |
return 1; |
| 286 |
} |
| 287 |
|
| 288 |
int Globals::globalAssign( event* the_event ){ |
| 289 |
|
| 290 |
int key; |
| 291 |
int token; |
| 292 |
interface_assign_type the_type = the_event->evt.asmt.asmt_type; |
| 293 |
char* lhs = the_event->evt.asmt.lhs; |
| 294 |
char err[300]; |
| 295 |
|
| 296 |
token = 0; |
| 297 |
key = hash( lhs ); |
| 298 |
if( command_table[key] != NULL ) token = command_table[key]->match( lhs ); |
| 299 |
|
| 300 |
if( token ){ |
| 301 |
|
| 302 |
switch( token ){ |
| 303 |
|
| 304 |
case G_FORCEFIELD: |
| 305 |
if( the_type == STRING ){ |
| 306 |
strcpy( force_field, the_event->evt.asmt.rhs.sval ); |
| 307 |
have_force_field = 1; |
| 308 |
return 1; |
| 309 |
} |
| 310 |
|
| 311 |
the_event->err_msg = |
| 312 |
strdup( "Global error. forceField was not a string assignment.\n" ); |
| 313 |
return 0; |
| 314 |
break; |
| 315 |
|
| 316 |
case G_NCOMPONENTS: |
| 317 |
if( the_type == STRING ){ |
| 318 |
the_event->err_msg = |
| 319 |
strdup("Global error. nComponents is not a double or an int.\n" ); |
| 320 |
return 0; |
| 321 |
} |
| 322 |
|
| 323 |
else if( the_type == DOUBLE ){ |
| 324 |
n_components = (int)the_event->evt.asmt.rhs.dval; |
| 325 |
components = new Component*[n_components]; |
| 326 |
have_n_components = 1; |
| 327 |
return 1; |
| 328 |
} |
| 329 |
|
| 330 |
else{ |
| 331 |
n_components = the_event->evt.asmt.rhs.ival; |
| 332 |
components = new Component*[n_components]; |
| 333 |
have_n_components = 1; |
| 334 |
return 1; |
| 335 |
} |
| 336 |
break; |
| 337 |
|
| 338 |
case G_NZCONSTRAINTS: |
| 339 |
if( the_type == STRING ){ |
| 340 |
the_event->err_msg = |
| 341 |
strdup("Global error. nZconstraints is not a double or an int.\n" ); |
| 342 |
return 0; |
| 343 |
} |
| 344 |
|
| 345 |
else if( the_type == DOUBLE ){ |
| 346 |
n_zConstraints = (int)the_event->evt.asmt.rhs.dval; |
| 347 |
zConstraints = new ZconStamp*[n_zConstraints]; |
| 348 |
have_n_zConstraints = 1; |
| 349 |
return 1; |
| 350 |
} |
| 351 |
|
| 352 |
else{ |
| 353 |
n_zConstraints = the_event->evt.asmt.rhs.ival; |
| 354 |
zConstraints = new ZconStamp*[n_zConstraints]; |
| 355 |
have_n_zConstraints = 1; |
| 356 |
return 1; |
| 357 |
} |
| 358 |
break; |
| 359 |
|
| 360 |
case G_TARGETTEMP: |
| 361 |
switch( the_type ){ |
| 362 |
|
| 363 |
case STRING: |
| 364 |
the_event->err_msg = |
| 365 |
strdup( "Global error. targetTemp is not a double or int.\n" ); |
| 366 |
return 0; |
| 367 |
break; |
| 368 |
|
| 369 |
case DOUBLE: |
| 370 |
target_temp = the_event->evt.asmt.rhs.dval; |
| 371 |
have_target_temp = 1; |
| 372 |
return 1; |
| 373 |
break; |
| 374 |
|
| 375 |
case INT: |
| 376 |
target_temp = (double)the_event->evt.asmt.rhs.ival; |
| 377 |
have_target_temp = 1; |
| 378 |
return 1; |
| 379 |
break; |
| 380 |
|
| 381 |
default: |
| 382 |
the_event->err_msg = |
| 383 |
strdup( "Global error. targetTemp unrecognized.\n" ); |
| 384 |
return 0; |
| 385 |
break; |
| 386 |
} |
| 387 |
break; |
| 388 |
|
| 389 |
case G_ENSEMBLE: |
| 390 |
if( the_type == STRING ){ |
| 391 |
strcpy( ensemble, the_event->evt.asmt.rhs.sval ); |
| 392 |
have_ensemble = 1; |
| 393 |
return 1; |
| 394 |
} |
| 395 |
|
| 396 |
the_event->err_msg = |
| 397 |
strdup( "Global error. ensemble was not assigned to a string\n" ); |
| 398 |
return 0; |
| 399 |
break; |
| 400 |
|
| 401 |
case G_MIXINGRULE: |
| 402 |
if( the_type == STRING ){ |
| 403 |
strcpy( mixingRule, the_event->evt.asmt.rhs.sval ); |
| 404 |
return 1; |
| 405 |
} |
| 406 |
|
| 407 |
the_event->err_msg = |
| 408 |
strdup( "Global error. mixing rule was not assigned to a string\n" ); |
| 409 |
return 0; |
| 410 |
break; |
| 411 |
|
| 412 |
case G_DT: |
| 413 |
switch( the_type ){ |
| 414 |
|
| 415 |
case STRING: |
| 416 |
the_event->err_msg = |
| 417 |
strdup( "Global error. dt is not a double or int.\n" ); |
| 418 |
return 0; |
| 419 |
break; |
| 420 |
|
| 421 |
case DOUBLE: |
| 422 |
dt = the_event->evt.asmt.rhs.dval; |
| 423 |
have_dt = 1; |
| 424 |
return 1; |
| 425 |
break; |
| 426 |
|
| 427 |
case INT: |
| 428 |
dt = (double)the_event->evt.asmt.rhs.ival; |
| 429 |
have_dt = 1; |
| 430 |
return 1; |
| 431 |
break; |
| 432 |
|
| 433 |
default: |
| 434 |
the_event->err_msg = |
| 435 |
strdup( "Global error. dt unrecognized.\n" ); |
| 436 |
return 0; |
| 437 |
break; |
| 438 |
} |
| 439 |
break; |
| 440 |
|
| 441 |
case G_RUNTIME: |
| 442 |
switch( the_type ){ |
| 443 |
|
| 444 |
case STRING: |
| 445 |
the_event->err_msg = |
| 446 |
strdup( "Global error. runTime is not a double or int.\n" ); |
| 447 |
return 0; |
| 448 |
break; |
| 449 |
|
| 450 |
case DOUBLE: |
| 451 |
run_time = the_event->evt.asmt.rhs.dval; |
| 452 |
have_run_time = 1; |
| 453 |
return 1; |
| 454 |
break; |
| 455 |
|
| 456 |
case INT: |
| 457 |
run_time = (double)the_event->evt.asmt.rhs.ival; |
| 458 |
have_run_time = 1; |
| 459 |
return 1; |
| 460 |
break; |
| 461 |
|
| 462 |
default: |
| 463 |
the_event->err_msg = |
| 464 |
strdup( "Global error. runTime unrecognized.\n" ); |
| 465 |
return 0; |
| 466 |
break; |
| 467 |
} |
| 468 |
break; |
| 469 |
|
| 470 |
case G_INITIALCONFIG: |
| 471 |
if( the_type == STRING ){ |
| 472 |
strcpy( initial_config, the_event->evt.asmt.rhs.sval ); |
| 473 |
have_initial_config = 1; |
| 474 |
return 1; |
| 475 |
} |
| 476 |
|
| 477 |
the_event->err_msg = |
| 478 |
strdup( "Global error. initialConfig was not a string assignment.\n" ); |
| 479 |
return 0; |
| 480 |
break; |
| 481 |
|
| 482 |
case G_FINALCONFIG: |
| 483 |
if( the_type == STRING ){ |
| 484 |
strcpy( final_config, the_event->evt.asmt.rhs.sval ); |
| 485 |
have_final_config = 1; |
| 486 |
return 1; |
| 487 |
} |
| 488 |
|
| 489 |
the_event->err_msg = |
| 490 |
strdup( "Global error. finalConfig was not a string assignment.\n" ); |
| 491 |
return 0; |
| 492 |
break; |
| 493 |
|
| 494 |
case G_NMOL: |
| 495 |
switch( the_type ){ |
| 496 |
|
| 497 |
case STRING: |
| 498 |
the_event->err_msg = |
| 499 |
strdup( "Global error. nMol is not a double or int.\n" ); |
| 500 |
return 0; |
| 501 |
break; |
| 502 |
|
| 503 |
case DOUBLE: |
| 504 |
n_mol = (int)the_event->evt.asmt.rhs.dval; |
| 505 |
have_n_mol = 1; |
| 506 |
return 1; |
| 507 |
break; |
| 508 |
|
| 509 |
case INT: |
| 510 |
n_mol = the_event->evt.asmt.rhs.ival; |
| 511 |
have_n_mol = 1; |
| 512 |
return 1; |
| 513 |
break; |
| 514 |
|
| 515 |
default: |
| 516 |
the_event->err_msg = |
| 517 |
strdup( "Global error. nMol unrecognized.\n" ); |
| 518 |
return 0; |
| 519 |
break; |
| 520 |
} |
| 521 |
break; |
| 522 |
|
| 523 |
case G_DENSITY: |
| 524 |
switch( the_type ){ |
| 525 |
|
| 526 |
case STRING: |
| 527 |
the_event->err_msg = |
| 528 |
strdup( "Global error. density is not a double or int.\n" ); |
| 529 |
return 0; |
| 530 |
break; |
| 531 |
|
| 532 |
case DOUBLE: |
| 533 |
density = the_event->evt.asmt.rhs.dval; |
| 534 |
have_density = 1; |
| 535 |
return 1; |
| 536 |
break; |
| 537 |
|
| 538 |
case INT: |
| 539 |
density = (double)the_event->evt.asmt.rhs.ival; |
| 540 |
have_density = 1; |
| 541 |
return 1; |
| 542 |
break; |
| 543 |
|
| 544 |
default: |
| 545 |
the_event->err_msg = |
| 546 |
strdup( "Global error. density unrecognized.\n" ); |
| 547 |
return 0; |
| 548 |
break; |
| 549 |
} |
| 550 |
break; |
| 551 |
|
| 552 |
case G_BOX: |
| 553 |
switch( the_type ){ |
| 554 |
|
| 555 |
case STRING: |
| 556 |
the_event->err_msg = |
| 557 |
strdup( "Global error. box is not a double or int.\n" ); |
| 558 |
return 0; |
| 559 |
break; |
| 560 |
|
| 561 |
case DOUBLE: |
| 562 |
box = the_event->evt.asmt.rhs.dval; |
| 563 |
have_box = 1; |
| 564 |
return 1; |
| 565 |
break; |
| 566 |
|
| 567 |
case INT: |
| 568 |
box = (double)the_event->evt.asmt.rhs.ival; |
| 569 |
have_box = 1; |
| 570 |
return 1; |
| 571 |
break; |
| 572 |
|
| 573 |
default: |
| 574 |
the_event->err_msg = |
| 575 |
strdup( "Global error. box unrecognized.\n" ); |
| 576 |
return 0; |
| 577 |
break; |
| 578 |
} |
| 579 |
break; |
| 580 |
|
| 581 |
case G_BOXX: |
| 582 |
switch( the_type ){ |
| 583 |
|
| 584 |
case STRING: |
| 585 |
the_event->err_msg = |
| 586 |
strdup( "Global error. boxX is not a double or int.\n" ); |
| 587 |
return 0; |
| 588 |
break; |
| 589 |
|
| 590 |
case DOUBLE: |
| 591 |
box_x = the_event->evt.asmt.rhs.dval; |
| 592 |
have_box_x = 1; |
| 593 |
return 1; |
| 594 |
break; |
| 595 |
|
| 596 |
case INT: |
| 597 |
box_x = (double)the_event->evt.asmt.rhs.ival; |
| 598 |
have_box_x = 1; |
| 599 |
return 1; |
| 600 |
break; |
| 601 |
|
| 602 |
default: |
| 603 |
the_event->err_msg = |
| 604 |
strdup( "Global error. boxX unrecognized.\n" ); |
| 605 |
return 0; |
| 606 |
break; |
| 607 |
} |
| 608 |
break; |
| 609 |
|
| 610 |
case G_BOXY: |
| 611 |
switch( the_type ){ |
| 612 |
|
| 613 |
case STRING: |
| 614 |
the_event->err_msg = |
| 615 |
strdup( "Global error. boxY is not a double or int.\n" ); |
| 616 |
return 0; |
| 617 |
break; |
| 618 |
|
| 619 |
case DOUBLE: |
| 620 |
box_y = the_event->evt.asmt.rhs.dval; |
| 621 |
have_box_y = 1; |
| 622 |
return 1; |
| 623 |
break; |
| 624 |
|
| 625 |
case INT: |
| 626 |
box_y = (double)the_event->evt.asmt.rhs.ival; |
| 627 |
have_box_y = 1; |
| 628 |
return 1; |
| 629 |
break; |
| 630 |
|
| 631 |
default: |
| 632 |
the_event->err_msg = |
| 633 |
strdup( "Global error. boxY unrecognized.\n" ); |
| 634 |
return 0; |
| 635 |
break; |
| 636 |
} |
| 637 |
break; |
| 638 |
|
| 639 |
case G_BOXZ: |
| 640 |
switch( the_type ){ |
| 641 |
|
| 642 |
case STRING: |
| 643 |
the_event->err_msg = |
| 644 |
strdup( "Global error. boxZ is not a double or int.\n" ); |
| 645 |
return 0; |
| 646 |
break; |
| 647 |
|
| 648 |
case DOUBLE: |
| 649 |
box_z = the_event->evt.asmt.rhs.dval; |
| 650 |
have_box_z = 1; |
| 651 |
return 1; |
| 652 |
break; |
| 653 |
|
| 654 |
case INT: |
| 655 |
box_z = (double)the_event->evt.asmt.rhs.ival; |
| 656 |
have_box_z = 1; |
| 657 |
return 1; |
| 658 |
break; |
| 659 |
|
| 660 |
default: |
| 661 |
the_event->err_msg = |
| 662 |
strdup( "Global error. boxZ unrecognized.\n" ); |
| 663 |
return 0; |
| 664 |
break; |
| 665 |
} |
| 666 |
break; |
| 667 |
|
| 668 |
case G_SAMPLETIME: |
| 669 |
switch( the_type ){ |
| 670 |
|
| 671 |
case STRING: |
| 672 |
the_event->err_msg = |
| 673 |
strdup( "Global error. sampleTime is not a double or int.\n" ); |
| 674 |
return 0; |
| 675 |
break; |
| 676 |
|
| 677 |
case DOUBLE: |
| 678 |
sample_time = the_event->evt.asmt.rhs.dval; |
| 679 |
have_sample_time = 1; |
| 680 |
return 1; |
| 681 |
break; |
| 682 |
|
| 683 |
case INT: |
| 684 |
sample_time = (double)the_event->evt.asmt.rhs.ival; |
| 685 |
have_sample_time = 1; |
| 686 |
return 1; |
| 687 |
break; |
| 688 |
|
| 689 |
default: |
| 690 |
the_event->err_msg = |
| 691 |
strdup( "Global error. sampleTime unrecognized.\n" ); |
| 692 |
return 0; |
| 693 |
break; |
| 694 |
} |
| 695 |
break; |
| 696 |
|
| 697 |
case G_STATUSTIME: |
| 698 |
switch( the_type ){ |
| 699 |
|
| 700 |
case STRING: |
| 701 |
the_event->err_msg = |
| 702 |
strdup( "Global error. statusTime is not a double or int.\n" ); |
| 703 |
return 0; |
| 704 |
break; |
| 705 |
|
| 706 |
case DOUBLE: |
| 707 |
status_time = the_event->evt.asmt.rhs.dval; |
| 708 |
have_status_time = 1; |
| 709 |
return 1; |
| 710 |
break; |
| 711 |
|
| 712 |
case INT: |
| 713 |
status_time = (double)the_event->evt.asmt.rhs.ival; |
| 714 |
have_status_time = 1; |
| 715 |
return 1; |
| 716 |
break; |
| 717 |
|
| 718 |
default: |
| 719 |
the_event->err_msg = |
| 720 |
strdup( "Global error. statusTime unrecognized.\n" ); |
| 721 |
return 0; |
| 722 |
break; |
| 723 |
} |
| 724 |
break; |
| 725 |
|
| 726 |
case G_THERMALTIME: |
| 727 |
switch( the_type ){ |
| 728 |
|
| 729 |
case STRING: |
| 730 |
the_event->err_msg = |
| 731 |
strdup( "Global error. thermalTime is not a double or int.\n" ); |
| 732 |
return 0; |
| 733 |
break; |
| 734 |
|
| 735 |
case DOUBLE: |
| 736 |
thermal_time = the_event->evt.asmt.rhs.dval; |
| 737 |
have_thermal_time = 1; |
| 738 |
return 1; |
| 739 |
break; |
| 740 |
|
| 741 |
case INT: |
| 742 |
thermal_time = (double)the_event->evt.asmt.rhs.ival; |
| 743 |
have_thermal_time = 1; |
| 744 |
return 1; |
| 745 |
break; |
| 746 |
|
| 747 |
default: |
| 748 |
the_event->err_msg = |
| 749 |
strdup( "Global error. thermalTime unrecognized.\n" ); |
| 750 |
return 0; |
| 751 |
break; |
| 752 |
} |
| 753 |
break; |
| 754 |
|
| 755 |
case G_ECR: |
| 756 |
switch( the_type ){ |
| 757 |
|
| 758 |
case STRING: |
| 759 |
the_event->err_msg = |
| 760 |
strdup( "Global error. electrostaticCutoffRadius is not a double or int.\n" ); |
| 761 |
return 0; |
| 762 |
break; |
| 763 |
|
| 764 |
case DOUBLE: |
| 765 |
ecr = the_event->evt.asmt.rhs.dval; |
| 766 |
have_ecr = 1; |
| 767 |
return 1; |
| 768 |
break; |
| 769 |
|
| 770 |
case INT: |
| 771 |
ecr = (double)the_event->evt.asmt.rhs.ival; |
| 772 |
have_ecr = 1; |
| 773 |
return 1; |
| 774 |
break; |
| 775 |
|
| 776 |
default: |
| 777 |
the_event->err_msg = |
| 778 |
strdup( "Global error. electrostaticCutoffRadius unrecognized.\n" ); |
| 779 |
return 0; |
| 780 |
break; |
| 781 |
} |
| 782 |
break; |
| 783 |
|
| 784 |
case G_EST: |
| 785 |
switch( the_type ){ |
| 786 |
|
| 787 |
case STRING: |
| 788 |
the_event->err_msg = |
| 789 |
strdup( "Global error. electrostaticSkinThickness is not a double or int.\n" ); |
| 790 |
return 0; |
| 791 |
break; |
| 792 |
|
| 793 |
case DOUBLE: |
| 794 |
est = the_event->evt.asmt.rhs.dval; |
| 795 |
have_est = 1; |
| 796 |
return 1; |
| 797 |
break; |
| 798 |
|
| 799 |
case INT: |
| 800 |
est = (double)the_event->evt.asmt.rhs.ival; |
| 801 |
have_est = 1; |
| 802 |
return 1; |
| 803 |
break; |
| 804 |
|
| 805 |
default: |
| 806 |
the_event->err_msg = |
| 807 |
strdup( "Global error. electrostaticSkinThickness unrecognized.\n" ); |
| 808 |
return 0; |
| 809 |
break; |
| 810 |
} |
| 811 |
break; |
| 812 |
|
| 813 |
case G_DIELECTRIC: |
| 814 |
switch( the_type ){ |
| 815 |
|
| 816 |
case STRING: |
| 817 |
the_event->err_msg = |
| 818 |
strdup( "Global error. dielectric is not a double or int.\n" ); |
| 819 |
return 0; |
| 820 |
break; |
| 821 |
|
| 822 |
case DOUBLE: |
| 823 |
dielectric = the_event->evt.asmt.rhs.dval; |
| 824 |
have_dielectric = 1; |
| 825 |
return 1; |
| 826 |
break; |
| 827 |
|
| 828 |
case INT: |
| 829 |
dielectric = (double)the_event->evt.asmt.rhs.ival; |
| 830 |
have_dielectric = 1; |
| 831 |
return 1; |
| 832 |
break; |
| 833 |
|
| 834 |
default: |
| 835 |
the_event->err_msg = |
| 836 |
strdup( "Global error. dielectric unrecognized.\n" ); |
| 837 |
return 0; |
| 838 |
break; |
| 839 |
} |
| 840 |
break; |
| 841 |
|
| 842 |
case G_TEMPSET: |
| 843 |
if( the_type == STRING ){ |
| 844 |
|
| 845 |
if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) tempSet = 1; |
| 846 |
else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) tempSet = 0; |
| 847 |
else{ |
| 848 |
the_event->err_msg = |
| 849 |
strdup( "Global error. tempSet was not \"true\" or \"false\".\n" ); |
| 850 |
return 0; |
| 851 |
} |
| 852 |
have_tempSet = 1; |
| 853 |
return 1; |
| 854 |
} |
| 855 |
|
| 856 |
the_event->err_msg = |
| 857 |
strdup( "Global error. tempSet was not \"true\" or \"false\".\n" ); |
| 858 |
return 0; |
| 859 |
break; |
| 860 |
|
| 861 |
case G_USEPBC: |
| 862 |
if( the_type == STRING ){ |
| 863 |
|
| 864 |
if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) usePBC = 1; |
| 865 |
else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) usePBC = 0; |
| 866 |
else{ |
| 867 |
the_event->err_msg = |
| 868 |
strdup( "Global error. usePeriodicBoundaryConditions was not \"true\" or \"false\".\n" ); |
| 869 |
return 0; |
| 870 |
} |
| 871 |
return 1; |
| 872 |
} |
| 873 |
|
| 874 |
the_event->err_msg = |
| 875 |
strdup( "Global error. usePeriodicBoundaryConditions was not \"true\" or \"false\".\n" ); |
| 876 |
return 0; |
| 877 |
break; |
| 878 |
|
| 879 |
case G_USERF: |
| 880 |
if( the_type == STRING ){ |
| 881 |
|
| 882 |
if( !strcasecmp( "true", the_event->evt.asmt.rhs.sval )) useRF = 1; |
| 883 |
else if( !strcasecmp( "false", the_event->evt.asmt.rhs.sval )) useRF = 0; |
| 884 |
else{ |
| 885 |
the_event->err_msg = |
| 886 |
strdup( "Global error. useReactionField was not \"true\" or \"false\".\n" ); |
| 887 |
return 0; |
| 888 |
} |
| 889 |
return 1; |
| 890 |
} |
| 891 |
|
| 892 |
the_event->err_msg = |
| 893 |
strdup( "Global error. useReactionField was not \"true\" or \"false\".\n" ); |
| 894 |
return 0; |
| 895 |
break; |
| 896 |
|
| 897 |
case G_TARGETPRESSURE: |
| 898 |
switch( the_type ){ |
| 899 |
|
| 900 |
case STRING: |
| 901 |
the_event->err_msg = |
| 902 |
strdup( "Global error. targetPressure is not a double or int.\n" ); |
| 903 |
return 0; |
| 904 |
break; |
| 905 |
|
| 906 |
case DOUBLE: |
| 907 |
target_pressure = the_event->evt.asmt.rhs.dval; |
| 908 |
have_target_pressure = 1; |
| 909 |
return 1; |
| 910 |
break; |
| 911 |
|
| 912 |
case INT: |
| 913 |
target_pressure = (double)the_event->evt.asmt.rhs.ival; |
| 914 |
have_target_pressure = 1; |
| 915 |
return 1; |
| 916 |
break; |
| 917 |
|
| 918 |
default: |
| 919 |
the_event->err_msg = |
| 920 |
strdup( "Global error. targetPressure unrecognized.\n" ); |
| 921 |
return 0; |
| 922 |
break; |
| 923 |
} |
| 924 |
break; |
| 925 |
|
| 926 |
case G_TAUTHERMOSTAT: |
| 927 |
switch( the_type ){ |
| 928 |
|
| 929 |
case STRING: |
| 930 |
the_event->err_msg = |
| 931 |
strdup( "Global error. tauThermostat is not a double or int.\n" ); |
| 932 |
return 0; |
| 933 |
break; |
| 934 |
|
| 935 |
case DOUBLE: |
| 936 |
tau_thermostat = the_event->evt.asmt.rhs.dval; |
| 937 |
have_tau_thermostat = 1; |
| 938 |
return 1; |
| 939 |
break; |
| 940 |
|
| 941 |
case INT: |
| 942 |
tau_thermostat = (double)the_event->evt.asmt.rhs.ival; |
| 943 |
have_tau_thermostat = 1; |
| 944 |
return 1; |
| 945 |
break; |
| 946 |
|
| 947 |
default: |
| 948 |
the_event->err_msg = |
| 949 |
strdup( "Global error. tauThermostat unrecognized.\n" ); |
| 950 |
return 0; |
| 951 |
break; |
| 952 |
} |
| 953 |
break; |
| 954 |
|
| 955 |
case G_TAUBAROSTAT: |
| 956 |
switch( the_type ){ |
| 957 |
|
| 958 |
case STRING: |
| 959 |
the_event->err_msg = |
| 960 |
strdup( "Global error. tauBarostat is not a double or int.\n" ); |
| 961 |
return 0; |
| 962 |
break; |
| 963 |
|
| 964 |
case DOUBLE: |
| 965 |
tau_barostat = the_event->evt.asmt.rhs.dval; |
| 966 |
have_tau_barostat = 1; |
| 967 |
return 1; |
| 968 |
break; |
| 969 |
|
| 970 |
case INT: |
| 971 |
tau_barostat = (double)the_event->evt.asmt.rhs.ival; |
| 972 |
have_tau_barostat = 1; |
| 973 |
return 1; |
| 974 |
break; |
| 975 |
|
| 976 |
default: |
| 977 |
the_event->err_msg = |
| 978 |
strdup( "Global error. tauBarostat unrecognized.\n" ); |
| 979 |
return 0; |
| 980 |
break; |
| 981 |
} |
| 982 |
break; |
| 983 |
|
| 984 |
case G_ZCONSTIME: |
| 985 |
switch( the_type ){ |
| 986 |
|
| 987 |
case STRING: |
| 988 |
the_event->err_msg = |
| 989 |
strdup( "Global error. zcons_time is not a double or int.\n" ); |
| 990 |
return 0; |
| 991 |
break; |
| 992 |
|
| 993 |
case DOUBLE: |
| 994 |
zcons_time = the_event->evt.asmt.rhs.dval; |
| 995 |
have_zcons_time = 1; |
| 996 |
return 1; |
| 997 |
break; |
| 998 |
|
| 999 |
case INT: |
| 1000 |
zcons_time = (double)the_event->evt.asmt.rhs.ival; |
| 1001 |
have_zcons_time = 1; |
| 1002 |
return 1; |
| 1003 |
break; |
| 1004 |
|
| 1005 |
default: |
| 1006 |
the_event->err_msg = |
| 1007 |
strdup( "Global error. zcons_time unrecognized.\n" ); |
| 1008 |
return 0; |
| 1009 |
break; |
| 1010 |
} |
| 1011 |
break; |
| 1012 |
|
| 1013 |
case G_ZCONSTOL: |
| 1014 |
switch( the_type ){ |
| 1015 |
|
| 1016 |
case STRING: |
| 1017 |
the_event->err_msg = |
| 1018 |
strdup( "Global error. zcons_tol is not a double or int.\n" ); |
| 1019 |
return 0; |
| 1020 |
break; |
| 1021 |
|
| 1022 |
case DOUBLE: |
| 1023 |
zcons_tol = the_event->evt.asmt.rhs.dval; |
| 1024 |
have_zcons_tol = 1; |
| 1025 |
return 1; |
| 1026 |
break; |
| 1027 |
|
| 1028 |
case INT: |
| 1029 |
zcons_tol = (double)the_event->evt.asmt.rhs.ival; |
| 1030 |
have_zcons_tol = 1; |
| 1031 |
return 1; |
| 1032 |
break; |
| 1033 |
|
| 1034 |
default: |
| 1035 |
the_event->err_msg = |
| 1036 |
strdup( "Global error. zcons_ol unrecognized.\n" ); |
| 1037 |
return 0; |
| 1038 |
break; |
| 1039 |
} |
| 1040 |
break; |
| 1041 |
|
| 1042 |
|
| 1043 |
// add more token cases here. |
| 1044 |
|
| 1045 |
} |
| 1046 |
} |
| 1047 |
|
| 1048 |
switch( the_type ){ |
| 1049 |
|
| 1050 |
case STRING: |
| 1051 |
sprintf( err, |
| 1052 |
"Global error. Unrecognized assignment:\n" |
| 1053 |
"\t-> %s = %s\n", |
| 1054 |
lhs, the_event->evt.asmt.rhs.sval ); |
| 1055 |
break; |
| 1056 |
|
| 1057 |
case DOUBLE: |
| 1058 |
sprintf( err, |
| 1059 |
"Global error. Unrecognized assignment:\n" |
| 1060 |
"\t-> %s = %lf\n", |
| 1061 |
lhs, the_event->evt.asmt.rhs.dval ); |
| 1062 |
break; |
| 1063 |
|
| 1064 |
case INT: |
| 1065 |
sprintf( err, |
| 1066 |
"Global error. Unrecognized assignment:\n" |
| 1067 |
"\t-> %s = %d\n", |
| 1068 |
lhs, the_event->evt.asmt.rhs.ival ); |
| 1069 |
break; |
| 1070 |
|
| 1071 |
default: |
| 1072 |
sprintf( err, |
| 1073 |
"Global error. Unrecognized assignment:\n" |
| 1074 |
"\t-> %s = ?\n", |
| 1075 |
lhs ); |
| 1076 |
break; |
| 1077 |
} |
| 1078 |
|
| 1079 |
the_event->err_msg = strdup( err ); |
| 1080 |
return 0; |
| 1081 |
} |
| 1082 |
|
| 1083 |
char* Globals::checkMe( void ){ |
| 1084 |
|
| 1085 |
char err[300]; |
| 1086 |
short int have_err = 0; |
| 1087 |
|
| 1088 |
strcpy( err, "Global error. The following are required:\n" ); |
| 1089 |
|
| 1090 |
if( !have_force_field ){ |
| 1091 |
strcat( err, "\t->forceField\n" ); |
| 1092 |
have_err= 1; |
| 1093 |
} |
| 1094 |
|
| 1095 |
if( !have_n_components ){ |
| 1096 |
strcat( err, "\t->nComponents\n" ); |
| 1097 |
have_err= 1; |
| 1098 |
} |
| 1099 |
|
| 1100 |
if( !have_target_temp ){ |
| 1101 |
strcat( err, "\t->targetTemp\n" ); |
| 1102 |
have_err= 1; |
| 1103 |
} |
| 1104 |
|
| 1105 |
if( !have_ensemble ){ |
| 1106 |
strcat( err, "\t->ensemble\n" ); |
| 1107 |
have_err= 1; |
| 1108 |
} |
| 1109 |
|
| 1110 |
if( !have_dt ){ |
| 1111 |
strcat( err, "\t->dt\n" ); |
| 1112 |
have_err= 1; |
| 1113 |
} |
| 1114 |
|
| 1115 |
if( !have_run_time ){ |
| 1116 |
strcat( err, "\t->runTime\n" ); |
| 1117 |
have_err= 1; |
| 1118 |
} |
| 1119 |
|
| 1120 |
if( have_err ) return strdup( err ); |
| 1121 |
|
| 1122 |
return NULL; |
| 1123 |
} |
| 1124 |
|
| 1125 |
int Globals::globalEnd( event* the_event ){ |
| 1126 |
|
| 1127 |
the_event->err_msg = checkMe(); |
| 1128 |
if( the_event->err_msg != NULL ) return 0; |
| 1129 |
|
| 1130 |
return 1; |
| 1131 |
} |
| 1132 |
|
| 1133 |
int Globals::hash( char* text ){ |
| 1134 |
|
| 1135 |
register unsigned short int i = 0; // loop counter |
| 1136 |
int key = 0; // the hash key |
| 1137 |
|
| 1138 |
while( text[i] != '\0' ){ |
| 1139 |
|
| 1140 |
key = ( ( key << hash_shift ) + text[i] ) % hash_size; |
| 1141 |
|
| 1142 |
i++; |
| 1143 |
} |
| 1144 |
|
| 1145 |
if( key < 0 ){ |
| 1146 |
|
| 1147 |
// if the key is less than zero, we've had an overflow error |
| 1148 |
|
| 1149 |
sprintf( painCave.errMsg, |
| 1150 |
"There has been an overflow error in the Globals' hash key."); |
| 1151 |
painCave.isFatal = 1; |
| 1152 |
simError(); |
| 1153 |
#ifdef IS_MPI |
| 1154 |
if( painCave.isEventLoop ){ |
| 1155 |
if( worldRank == 0 ) mpiInterfaceExit(); |
| 1156 |
} |
| 1157 |
#endif //is_mpi |
| 1158 |
} |
| 1159 |
|
| 1160 |
return key; |
| 1161 |
} |
| 1162 |
|
| 1163 |
void Globals::addHash( char* text, int token ){ |
| 1164 |
|
| 1165 |
int key; |
| 1166 |
LinkedCommand* the_element; |
| 1167 |
|
| 1168 |
the_element = new LinkedCommand; |
| 1169 |
the_element->setValues( text, token ); |
| 1170 |
|
| 1171 |
key = hash( text ); |
| 1172 |
the_element->setNext( command_table[key] ); |
| 1173 |
command_table[key] = the_element; |
| 1174 |
} |