8 |
|
#include "Component.hpp" |
9 |
|
#include "LinkedCommand.hpp" |
10 |
|
#include "MakeStamps.hpp" |
11 |
+ |
#include "ZconStamp.hpp" |
12 |
|
|
13 |
|
using namespace std; |
14 |
|
|
21 |
|
|
22 |
|
int newComponent( event* the_event ); |
23 |
|
int componentAssign( event* the_event ); |
23 |
– |
int componentStartIndex( event* the_event ); |
24 |
|
int componentEnd( event* the_event ); |
25 |
+ |
|
26 |
+ |
int newZconstraint( event* the_event ); |
27 |
+ |
int zConstraintAssign( event* the_event ); |
28 |
+ |
int zConstraintEnd( event* the_event ); |
29 |
|
|
30 |
|
int globalAssign( event* the_event ); |
31 |
|
int globalEnd( event* the_event ); |
41 |
|
double getDt( void ) { return dt; } |
42 |
|
double getRunTime( void ) { return run_time; } |
43 |
|
|
44 |
+ |
|
45 |
+ |
int getNzConstraints( void ) { return n_zConstraints; } |
46 |
|
char* getInitialConfig( void ) { return initial_config; } |
47 |
|
char* getFinalConfig( void ) { return final_config; } |
48 |
|
int getNMol( void ) { return n_mol; } |
62 |
|
int getUseRF( void ) { return useRF;} |
63 |
|
char* getMixingRule( void) { return mixingRule;} |
64 |
|
double getZConsTime(void) { return zcons_time;} |
59 |
– |
vector<int> getIndexOfAllZConsMols(void){ return zconsMolIndex;} |
65 |
|
|
66 |
|
short int haveInitialConfig( void ) { return have_initial_config; } |
67 |
|
short int haveFinalConfig( void ) { return have_final_config; } |
82 |
|
short int haveQmass( void ) { return have_q_mass; } |
83 |
|
short int haveTauThermostat( void ) { return have_tau_thermostat;} |
84 |
|
short int haveTauBarostat( void ) { return have_tau_barostat;} |
85 |
< |
short int haveZConsTime(void) { return have_zcons_time;} |
86 |
< |
short int haveIndexOfAllZConsMols() { return have_index_of_all_zcons_mols;} |
82 |
< |
|
85 |
> |
short int haveZconstraintTime(void) { return have_zcon_time; } |
86 |
> |
short int haveZconstraints( void ) { return have_zConstraints;} |
87 |
|
|
88 |
|
/* other accessors */ |
89 |
|
Component** getComponents( void ) { return components; } |
90 |
+ |
ZconStamp** getZconstraints( void ) { return zConstraints; } |
91 |
|
|
92 |
|
private: |
93 |
|
|
101 |
|
|
102 |
|
Component* current_component; |
103 |
|
Component** components; // the array of components |
104 |
+ |
|
105 |
+ |
ZconStamp* current_zConstraint; |
106 |
+ |
ZconStamp** zConstraints; // the array of zConstraints |
107 |
+ |
|
108 |
|
char force_field[100]; |
109 |
|
int n_components; |
110 |
+ |
int n_zConstraints; |
111 |
|
double target_temp; |
112 |
|
double target_pressure; |
113 |
|
char ensemble[100]; |
133 |
|
double tau_thermostat; |
134 |
|
double tau_barostat; |
135 |
|
double zcons_time; |
126 |
– |
vector<int> zconsMolIndex; |
136 |
|
|
137 |
|
//required arguments |
138 |
|
short int have_force_field, have_n_components, have_target_temp; |
144 |
|
short int have_sample_time, have_status_time, have_ecr, have_dielectric; |
145 |
|
short int have_tempSet, have_thermal_time, have_est, have_q_mass; |
146 |
|
short int have_tau_thermostat, have_tau_barostat; |
147 |
< |
short int have_zcons_time, have_index_of_all_zcons_mols; |
147 |
> |
short int have_zcon_time, have_zConstraints, have_n_zConstraints; |
148 |
|
|
149 |
|
}; |
150 |
|
|