14 |
|
n_bends = 0; |
15 |
|
n_torsions = 0; |
16 |
|
n_rigidbodies = 0; |
17 |
+ |
n_integrable = 0; |
18 |
|
|
19 |
|
unhandled = NULL; |
20 |
|
atoms = NULL; |
247 |
|
char* MoleculeStamp::addAtom( AtomStamp* the_atom, int atomIndex ){ |
248 |
|
|
249 |
|
if( have_atoms && atomIndex < n_atoms ) atoms[atomIndex] = the_atom; |
250 |
< |
else{ |
250 |
> |
else { |
251 |
|
if( have_atoms ){ |
252 |
|
sprintf( errMsg, "MoleculeStamp error, %d out of nAtoms range", |
253 |
|
atomIndex ); |
265 |
|
|
266 |
|
if( have_rigidbodies && rigidBodyIndex < n_rigidbodies ) |
267 |
|
rigidBodies[rigidBodyIndex] = the_rigidbody; |
268 |
< |
else{ |
268 |
> |
else { |
269 |
|
if( have_rigidbodies ){ |
270 |
|
sprintf( errMsg, "MoleculeStamp error, %d out of nRigidBodies range", |
271 |
|
rigidBodyIndex ); |
366 |
|
return strdup( errMsg ); |
367 |
|
} |
368 |
|
|
369 |
+ |
|
370 |
+ |
n_integrable = n_atoms; |
371 |
+ |
for (i = 0; i < n_rigidbodies; i++) |
372 |
+ |
n_integrable -= rigidBodies[i]->getNMembers(); |
373 |
+ |
|
374 |
+ |
if (n_integrable <= 0 || n_integrable > n_atoms) { |
375 |
+ |
sprintf( errMsg, |
376 |
+ |
"MoleculeStamp error. n_integrable is either <= 0 or" |
377 |
+ |
" greater than n_atoms in molecule \"%s\".\n", name ); |
378 |
+ |
return strdup( errMsg ); |
379 |
+ |
} |
380 |
+ |
|
381 |
|
return NULL; |
382 |
|
} |