replace c++ header stuff with more portable c header stuff Also, mod file fixes and portability changes Some fortran changes will need to be reversed.
fixed some additional remarks from icc -w3 (extra verbose output)
cleaned things with gcc -Wall and g++ -Wall
fixed a really annoying bug in Directional Atom, where mu was getting written to pseudorandom memory location.
debugging globals
switched SimInfo to use a system configuration from SimState rather than arrays from Atom
added get and set routines to Atom and DirectionalAtom
found a bug. Unit vectors were not being updated
the skeleton for making the molecules is in place. ForceField needs to be updated next.
This commit was generated by cvs2svn to compensate for changes in r377, which included commits to RCS files with non-trunk default branches.
New OOPSE Tree
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