1 |
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#define _LARGEFILE_SOURCE64 |
2 |
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#define _FILE_OFFSET_BITS 64 |
3 |
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4 |
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#include <string.h> |
96 |
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indexArray.push_back(make_pair(i, atoms[i]->getGlobalIndex())); |
97 |
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98 |
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sort(indexArray.begin(), indexArray.end(), indexSortingCriterion); |
98 |
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99 |
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//for (int i = 0; i < mpiSim->getMyNlocal(); i++) { |
100 |
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// printf("node %d has global %d at local %d\n", worldRank, indexArray[i].second, indexArray[i].first); |
101 |
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//} |
102 |
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99 |
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} |
100 |
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101 |
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#endif |
106 |
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vector<ofstream*> fileStreams; |
107 |
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108 |
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#ifdef IS_MPI |
113 |
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printf("Hello from node %d\n", worldRank); |
114 |
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sortByGlobalIndex(); |
109 |
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if(worldRank == 0 ){ |
110 |
< |
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110 |
> |
#endif |
111 |
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finalOut.open( entry_plug->finalName, ios::out | ios::trunc ); |
112 |
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if( !finalOut ){ |
113 |
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sprintf( painCave.errMsg, |
116 |
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painCave.isFatal = 1; |
117 |
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simError(); |
118 |
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} |
119 |
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#ifdef IS_MPI |
120 |
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} |
121 |
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#endif // is_mpi |
122 |
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391 |
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haveError = 0; |
392 |
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which_atom = i; |
393 |
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399 |
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//local_index = -1; |
400 |
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401 |
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//for (j=0; (j<mpiSim->getMyNlocal()) && (local_index < 0); j++) { |
402 |
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// if (atoms[j]->getGlobalIndex() == which_atom) local_index = j; |
403 |
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//} |
404 |
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405 |
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//if (local_index != -1) { |
406 |
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394 |
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local_index = indexArray[currentIndex].first; |
395 |
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396 |
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if (which_atom == indexArray[currentIndex].second) { |
519 |
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} |
520 |
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which_atom = i; |
521 |
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535 |
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//local_index = -1; |
536 |
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537 |
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//for (j=0; (j<mpiSim->getMyNlocal()) && (local_index < 0); j++) { |
538 |
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// if (atoms[j]->getGlobalIndex() == which_atom) local_index = j; |
539 |
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//} |
540 |
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541 |
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//if (local_index != -1) { |
542 |
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522 |
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local_index = indexArray[currentIndex].first; |
523 |
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524 |
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if (which_atom == indexArray[currentIndex].second) { |