fixed the restart from NVT exstended state bug
added support for the ignore XS state info flag
Fixed a bug of sending message from master node to itself in DumpWriter.cpp and InitializeFromFile.cpp
added a more verbose error message in SimInfo. Added a more informative error message in InitializeFromFile
add chi and eta to the comment line of dump file.
fixes for compatibility
replace c++ header stuff with more portable c header stuff Also, mod file fixes and portability changes Some fortran changes will need to be reversed.
cleaned things with gcc -Wall and g++ -Wall
fixed a really annoying bug in Directional Atom, where mu was getting written to pseudorandom memory location.
debugging globals
switched SimInfo to use a system configuration from SimState rather than arrays from Atom
Fixed a current time initialization bug in InitFromFile.
some initial changes to Dumpwriter and friends to accomadate random file access
fixed Initializefrom file to start the simulation from the time specified in the init file.
fixed some bugs
Bug fixing NPTi and NPTf. there is some error in the caclulation of HmatInverse.
fixed some small things with simError.h
Fixed DumpWriter to be more robust to errors. also added a little namespace to InitFromFile to wrap it's helper functions in MPI
Bug fixes in read-write routines.
fixes for local->global atom numbering in MPI
Fixes to fileio for MPI
This commit was generated by cvs2svn to compensate for changes in r377, which included commits to RCS files with non-trunk default branches.
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