452 |
|
int* indexOfZConsMols; //index of local Z-Constraint Molecules |
453 |
|
double* fz; |
454 |
|
double* curZPos; |
455 |
– |
|
456 |
– |
|
455 |
|
|
456 |
+ |
double zconsFixTime; |
457 |
+ |
double zconsGap; |
458 |
+ |
bool hasZConsGap; |
459 |
+ |
vector<double> endFixTime; |
460 |
+ |
|
461 |
|
int whichDirection; //constraint direction |
462 |
|
|
463 |
|
private: |
470 |
|
double calcMovingMolsCOMVel(); |
471 |
|
double calcSysCOMVel(); |
472 |
|
double calcTotalForce(); |
473 |
+ |
void updateZPos(); |
474 |
|
|
475 |
|
ForceSubtractionPolicy* forcePolicy; //force subtraction policy |
476 |
|
friend class ForceSubtractionPolicy; |
477 |
|
|
478 |
|
}; |
479 |
|
|
480 |
+ |
/* |
481 |
+ |
//Steered Molecular Dynamics |
482 |
+ |
template<typename T> class SMD : public T{ |
483 |
+ |
public: |
484 |
+ |
SMD( SimInfo *theInfo, ForceFields* the_ff); |
485 |
+ |
~SMD(); |
486 |
+ |
|
487 |
+ |
virtual void integrate(); |
488 |
+ |
virtual void calcForce( int calcPot, int calcStress ); |
489 |
+ |
}; |
490 |
+ |
*/ |
491 |
|
#endif |