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root/group/trunk/OOPSE/libmdtools/Make.dep
Revision: 1268
Committed: Fri Jun 11 17:16:21 2004 UTC (20 years, 3 months ago) by tim
File size: 69346 byte(s)
Log Message: 
roll in progress

File Contents

# User Rev Content
1 gezelter 747 # DO NOT DELETE THIS LINE - used by make depend
2 gezelter 1097 obj/mpiForceField$(O) : ./mpiForceField.c
3 tim 1119 obj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
4 gezelter 1097 obj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
5 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
6 gezelter 1224 obj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
7     ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
8     ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
9     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
10 gezelter 1097 obj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
11 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
12 gezelter 1097 obj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
13 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
14     ./AbstractClasses.hpp ../libBASS/simError.h
15 gezelter 1097 obj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
16 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
17 gezelter 1097 obj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
18 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
19     ./AbstractClasses.hpp
20 gezelter 1224 obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
21     ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
22     ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
23     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
24     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
25     ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
26 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
27     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
28     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
29     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
30     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
31     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
32 gezelter 1224 obj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
33     ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
34     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
35     ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
36 gezelter 1097 obj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
37 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
38     ../libBASS/simError.h ./MatVec3.h
39 gezelter 1224 obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
40     ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
41     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
42 tim 1119 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
43     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
44 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
45 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
46     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
47     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
48     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
49     ./fortranWrappers.hpp
50 gezelter 1097 obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
51 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
52     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
53     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
54     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
55 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
56 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
57     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
58     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
59     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
60     ../libBASS/simError.h
61 gezelter 1224 obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
62     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
63     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
64 gezelter 1097 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
65     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
66 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
67 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
68     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
69     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
70     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
71     ../libBASS/simError.h
72 gezelter 1097 obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
73 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
74     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
75     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
76     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
77 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
78 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
79     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
80     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
81     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
82     ./fortranWrappers.hpp
83 gezelter 1224 obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
84     obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
85     ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
86     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
87     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
88     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
89     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
90 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
91     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
92     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
93     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
94 gezelter 1224 obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
95     ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
96     ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
97     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
98     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
99     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
100     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
101 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
102     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
103     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h ./fForceField.h
104 gezelter 1224 obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
105     obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
106     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
107     ./DirectionalAtom.hpp ./AbstractClasses.hpp
108     obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
109     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
110     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
111     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
112     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
113     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
114 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
115     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
116     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
117     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
118     ../libBASS/simError.h
119     obj/Integrator$(O) : ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
120     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
121     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
122     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
123     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
124 tim 1268 ./SimState.hpp ./BaseVisitor.hpp ./Roll.hpp ./Vector3d.hpp ./Integrator.hpp \
125     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
126     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
127     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
128     ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
129     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
130     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
131     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
132     ../libBASS/simError.h
133 gezelter 1224 obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
134 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
135     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
136     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
137     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
138 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
139 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
140     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
141     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
142     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
143     ./fortranWrappers.hpp
144 gezelter 1224 obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
145 tim 1119 obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
146     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
147     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
148     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
149     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
150 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
151 tim 1234 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
152     ../libBASS/simError.h
153 gezelter 1224 obj/mpiSimulation$(O) : ./mpiSimulation.cpp
154     obj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
155     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
156     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
157     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
158     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
159     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
160 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
161     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
162     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
163     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
164 gezelter 1224 ./ZConsWriter.hpp ../libBASS/simError.h
165 tim 1119 obj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
166     ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
167     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
168 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
169     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
170     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
171 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
172     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
173     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
174     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
175     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
176 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
177 tim 1119 obj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
178     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
179     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
180     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
181     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
182 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
183 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
184     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
185     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
186     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
187 gezelter 1199 ./ZConsWriter.hpp ../libBASS/simError.h
188 gezelter 1097 obj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
189 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
190     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
191 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
192     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
193     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
194 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
195     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
196     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
197     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
198     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
199 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
200 tim 1119 obj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
201     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
202     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
203     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
204     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
205 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
206 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
207     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
208     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
209     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
210 gezelter 1199 ./ZConsWriter.hpp ../libBASS/simError.h
211 gezelter 1097 obj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
212 tim 1119 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
213     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
214 gezelter 1097 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
215     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
216 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
217 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
218     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
219     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
220     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
221     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
222     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./ShakeMin.hpp \
223     ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
224     ./ConstraintIterator.hpp
225 gezelter 1224 obj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
226     ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
227     ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
228     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
229     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
230     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
231 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
232     ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
233     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
234     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
235 tim 1119 obj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
236     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
237     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
238     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
239     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
240 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
241 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
242     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
243     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
244     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
245     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
246     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
247 gezelter 1224 obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
248     obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
249     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
250     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
251     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
252     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
253     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
254 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
255     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
256     ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
257     ./fSimulation.h ../libBASS/simError.h
258 gezelter 1224 obj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
259     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
260     ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
261     ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
262     obj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
263     ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
264     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
265     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
266 gezelter 1097 obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
267 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
268     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
269     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
270 gezelter 1097 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
271 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
272 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
273     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
274     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
275     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
276     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
277     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
278 gezelter 1224 obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
279     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
280     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
281     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
282     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
283     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
284 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
285     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
286     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
287     ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
288     ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h \
289     ./ConstraintManager.hpp ./ConstraintIterator.hpp
290 gezelter 1224 obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
291     ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
292     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
293     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
294     ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
295     ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
296     ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
297     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
298     ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
299 tim 1234 ./AbstractClasses.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
300     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ./Restraints.hpp \
301     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
302     ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
303     ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
304 tim 1268 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp ./Roll.hpp \
305     ./Vector3d.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h \
306     ./NVT.cpp ../libBASS/simError.h ./NPTf.cpp ./MatVec3.h ../libBASS/simError.h \
307     ./NPT.cpp ../libBASS/simError.h ./NPTi.cpp ../libBASS/simError.h ./NPTxyz.cpp \
308     ../libBASS/simError.h ./ZConstraint.cpp ../libBASS/simError.h \
309     ../libBASS/parse_me.h ../libBASS/simError.h ./OOPSEMinimizer.hpp \
310     ./MinimizerParameterSet.hpp ./ConstraintManager.hpp
311 gezelter 1224 obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
312     obj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
313     obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
314     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
315     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
316     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
317     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
318     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
319 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
320     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
321     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
322     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
323     ../libBASS/simError.h
324 gezelter 1224 obj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
325     obj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
326     ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
327     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
328     ../libBASS/AtomStamp.hpp ../libBASS/simError.h
329     obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
330     ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
331     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
332     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
333     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
334     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
335 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
336     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
337     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
338     ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
339     ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
340     ../libBASS/simError.h ./MatVec3.h
341 gezelter 1224 obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
342     ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
343     obj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
344     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
345     ./AbstractClasses.hpp
346     obj/Utility$(O) : ./Utility.cpp ./Utility.hpp
347     obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
348     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
349     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
350     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
351     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
352     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
353 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
354     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
355     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
356     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
357     ./fortranWrappers.hpp
358 gezelter 1097 obj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
359 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
360     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
361     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
362     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
363 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
364 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
365     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
366     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
367     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
368     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
369     ./ZConsWriter.hpp ../libBASS/simError.h
370 gezelter 1224 obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
371     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
372     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
373     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
374 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
375 gezelter 1224 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
376 tim 1234 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp \
377     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
378     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
379     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
380     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
381 gezelter 1224 ../libBASS/simError.h
382 tim 1119 obj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
383     ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
384     ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
385 gezelter 1097 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
386     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
387 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
388 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
389     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
390     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
391     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
392     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
393     ./ZConsWriter.hpp
394     obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
395     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
396     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
397     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
398     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
399     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
400     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
401     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
402     ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
403     ./fSimulation.h ../libBASS/simError.h
404     obj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
405     ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
406     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
407     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
408     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
409     ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
410     ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
411     ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
412     ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
413     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
414     ./fortranWrapDefines.hpp ./fSimulation.h
415     obj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
416     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
417     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
418     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
419     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
420     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
421     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
422     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
423     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
424     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
425 tim 1254 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
426     ../libBASS/simError.h
427 tim 1234 obj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
428     ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
429     ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
430     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
431     ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
432     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
433     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
434     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
435 tim 1158 ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
436 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
437 tim 1254 ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
438 tim 1234 obj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
439     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
440     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
441     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
442     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
443     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
444     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
445     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
446     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
447     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
448 tim 1254 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
449     obj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
450 tim 1234 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
451     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
452 tim 1254 ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
453     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
454     ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
455     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
456     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
457     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
458     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
459     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
460 tim 1234 obj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
461     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
462     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
463     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
464     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
465     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
466     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
467     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
468     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
469     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
470     obj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
471     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
472     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
473     ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
474 gezelter 1224 obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
475     ../libBASS/simError.h
476 tim 1254 obj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
477     obj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
478     ./Quaternion.hpp
479     obj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
480     ./Euler3.hpp
481     obj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
482     obj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
483     ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
484     ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
485     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
486     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
487     ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
488     ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
489     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
490     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
491     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
492     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
493     ./fortranWrapDefines.hpp ./fSimulation.h
494 gezelter 1097 MPIobj/mpiForceField$(O) : ./mpiForceField.c
495 tim 1119 MPIobj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
496 gezelter 1097 MPIobj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
497 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
498 gezelter 1224 MPIobj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
499     ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
500     ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
501     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
502 gezelter 1097 MPIobj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
503 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
504 gezelter 1097 MPIobj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
505 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
506     ./AbstractClasses.hpp ../libBASS/simError.h
507 gezelter 1097 MPIobj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
508 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
509 gezelter 1097 MPIobj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
510 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
511     ./AbstractClasses.hpp
512 gezelter 1224 MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
513     ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
514     ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
515     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
516     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
517     ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
518 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
519     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
520     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
521     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
522     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
523     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
524 gezelter 1224 MPIobj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
525     ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
526     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
527     ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
528 gezelter 1097 MPIobj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
529 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
530     ../libBASS/simError.h ./MatVec3.h
531 gezelter 1224 MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
532     ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
533     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
534 tim 1119 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
535     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
536 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
537 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
538     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
539     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
540     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
541     ./fortranWrappers.hpp
542 gezelter 1097 MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
543 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
544     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
545     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
546     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
547 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
548 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
549     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
550     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
551     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
552     ../libBASS/simError.h
553 gezelter 1224 MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
554     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
555     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
556 gezelter 1097 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
557     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
558 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
559 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
560     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
561     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
562     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
563     ../libBASS/simError.h
564 gezelter 1097 MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
565 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
566     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
567     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
568     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
569 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
570 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
571     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
572     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
573     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
574     ./fortranWrappers.hpp
575 gezelter 1224 MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
576     MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
577     ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
578     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
579     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
580     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
581     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
582 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
583     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
584     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
585     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
586 gezelter 1224 MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
587     ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
588     ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
589     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
590     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
591     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
592     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
593 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
594     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
595     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h ./fForceField.h
596 gezelter 1224 MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
597     MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
598     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
599     ./DirectionalAtom.hpp ./AbstractClasses.hpp
600     MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
601     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
602     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
603     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
604     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
605     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
606 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
607     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
608     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
609     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
610     ../libBASS/simError.h
611     MPIobj/Integrator$(O) : ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
612     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
613     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
614     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
615     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
616 tim 1268 ./SimState.hpp ./BaseVisitor.hpp ./Roll.hpp ./Vector3d.hpp ./Integrator.hpp \
617     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
618     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
619     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
620     ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
621     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
622     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
623     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
624     ../libBASS/simError.h
625 gezelter 1224 MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
626 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
627     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
628     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
629     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
630 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
631 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
632     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
633     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
634     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
635     ./fortranWrappers.hpp
636 gezelter 1224 MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
637 tim 1119 MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
638     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
639     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
640     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
641     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
642 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
643 tim 1234 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
644     ../libBASS/simError.h
645 gezelter 1224 MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
646     MPIobj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
647     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
648     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
649     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
650     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
651     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
652 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
653     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
654     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
655     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
656 gezelter 1224 ./ZConsWriter.hpp ../libBASS/simError.h
657 tim 1119 MPIobj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
658     ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
659     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
660 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
661     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
662     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
663 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
664     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
665     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
666     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
667     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
668 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
669 tim 1119 MPIobj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
670     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
671     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
672     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
673     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
674 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
675 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
676     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
677     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
678     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
679 gezelter 1199 ./ZConsWriter.hpp ../libBASS/simError.h
680 gezelter 1097 MPIobj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
681 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
682     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
683 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
684     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
685     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
686 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
687     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
688     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
689     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
690     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
691 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
692 tim 1119 MPIobj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
693     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
694     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
695     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
696     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
697 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
698 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
699     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
700     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
701     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
702 gezelter 1199 ./ZConsWriter.hpp ../libBASS/simError.h
703 gezelter 1097 MPIobj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
704 tim 1119 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
705     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
706 gezelter 1097 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
707     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
708 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
709 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
710     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
711     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
712     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
713     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
714     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./ShakeMin.hpp \
715     ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
716     ./ConstraintIterator.hpp
717 gezelter 1224 MPIobj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
718     ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
719     ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
720     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
721     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
722     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
723 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
724     ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
725     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
726     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
727 tim 1119 MPIobj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
728     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
729     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
730     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
731     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
732 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
733 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
734     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
735     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
736     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
737     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
738     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
739 gezelter 1224 MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
740     MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
741     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
742     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
743     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
744     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
745     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
746 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
747     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
748     ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
749     ./fSimulation.h ../libBASS/simError.h
750 gezelter 1224 MPIobj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
751     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
752     ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
753     ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
754     MPIobj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
755     ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
756     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
757     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
758 gezelter 1097 MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
759 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
760     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
761     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
762 gezelter 1097 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
763 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
764 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
765     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
766     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
767     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
768     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
769     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
770 gezelter 1224 MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
771     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
772     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
773     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
774     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
775     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
776 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
777     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
778     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
779     ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
780     ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h \
781     ./ConstraintManager.hpp ./ConstraintIterator.hpp
782 gezelter 1224 MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
783     ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
784     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
785     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
786     ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
787     ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
788     ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
789     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
790     ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
791 tim 1234 ./AbstractClasses.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
792     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ./Restraints.hpp \
793     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
794     ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
795     ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
796 tim 1268 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp ./Roll.hpp \
797     ./Vector3d.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h \
798     ./NVT.cpp ../libBASS/simError.h ./NPTf.cpp ./MatVec3.h ../libBASS/simError.h \
799     ./NPT.cpp ../libBASS/simError.h ./NPTi.cpp ../libBASS/simError.h ./NPTxyz.cpp \
800     ../libBASS/simError.h ./ZConstraint.cpp ../libBASS/simError.h \
801     ../libBASS/parse_me.h ../libBASS/simError.h ./OOPSEMinimizer.hpp \
802     ./MinimizerParameterSet.hpp ./ConstraintManager.hpp
803 gezelter 1224 MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
804     MPIobj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
805     MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
806     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
807     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
808     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
809     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
810     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
811 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
812     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
813     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
814     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
815     ../libBASS/simError.h
816 gezelter 1224 MPIobj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
817     MPIobj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
818     ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
819     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
820     ../libBASS/AtomStamp.hpp ../libBASS/simError.h
821     MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
822     ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
823     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
824     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
825     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
826     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
827 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
828     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
829     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
830     ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
831     ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
832     ../libBASS/simError.h ./MatVec3.h
833 gezelter 1224 MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
834     ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
835     MPIobj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
836     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
837     ./AbstractClasses.hpp
838     MPIobj/Utility$(O) : ./Utility.cpp ./Utility.hpp
839     MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
840     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
841     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
842     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
843     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
844     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
845 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
846     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
847     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
848     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
849     ./fortranWrappers.hpp
850 gezelter 1097 MPIobj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
851 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
852     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
853     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
854     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
855 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
856 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
857     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
858     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
859     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
860     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
861     ./ZConsWriter.hpp ../libBASS/simError.h
862 gezelter 1224 MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
863     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
864     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
865     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
866 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
867 gezelter 1224 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
868 tim 1234 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp \
869     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
870     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
871     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
872     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
873 gezelter 1224 ../libBASS/simError.h
874 tim 1119 MPIobj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
875     ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
876     ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
877 gezelter 1097 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
878     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
879 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
880 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
881     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
882     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
883     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
884     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
885     ./ZConsWriter.hpp
886     MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
887     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
888     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
889     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
890     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
891     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
892     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
893     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
894     ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
895     ./fSimulation.h ../libBASS/simError.h
896     MPIobj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
897     ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
898     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
899     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
900     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
901     ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
902     ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
903     ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
904     ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
905     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
906     ./fortranWrapDefines.hpp ./fSimulation.h
907     MPIobj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
908     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
909     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
910     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
911     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
912     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
913     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
914     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
915     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
916     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
917 tim 1254 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
918     ../libBASS/simError.h
919 tim 1234 MPIobj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
920     ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
921     ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
922     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
923     ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
924     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
925     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
926     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
927 tim 1158 ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
928 gezelter 1199 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
929 tim 1254 ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
930 tim 1234 MPIobj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
931     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
932     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
933     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
934     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
935     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
936     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
937     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
938     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
939     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
940 tim 1254 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
941     MPIobj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
942 tim 1234 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
943     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
944 tim 1254 ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
945     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
946     ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
947     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
948     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
949     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
950     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
951     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
952 tim 1234 MPIobj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
953     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
954     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
955     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
956     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
957     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
958     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
959     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
960     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
961     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
962     MPIobj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
963     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
964     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
965     ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
966 gezelter 1224 MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
967     ../libBASS/simError.h
968 tim 1254 MPIobj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
969     MPIobj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
970     ./Quaternion.hpp
971     MPIobj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
972     ./Euler3.hpp
973     MPIobj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
974     MPIobj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
975     ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
976     ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
977     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
978     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
979     ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
980     ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
981     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
982     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
983     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
984     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
985     ./fortranWrapDefines.hpp ./fSimulation.h