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root/group/trunk/OOPSE/libmdtools/Make.dep
Revision: 1269
Committed: Fri Jun 11 19:24:21 2004 UTC (20 years, 1 month ago) by gezelter
File size: 67927 byte(s)
Log Message: 
Fixed dependency bug (we hope)

File Contents

# User Rev Content
1 gezelter 747 # DO NOT DELETE THIS LINE - used by make depend
2 gezelter 1097 obj/mpiForceField$(O) : ./mpiForceField.c
3 tim 1119 obj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
4 gezelter 1097 obj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
5 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
6 gezelter 1224 obj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
7     ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
8     ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
9     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
10 gezelter 1097 obj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
11 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
12 gezelter 1097 obj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
13 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
14     ./AbstractClasses.hpp ../libBASS/simError.h
15 gezelter 1097 obj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
16 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
17 gezelter 1097 obj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
18 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
19     ./AbstractClasses.hpp
20 gezelter 1269 obj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
21     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
22     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
23     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
24     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
25     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
26     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
27     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
28     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
29     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
30 gezelter 1224 obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
31     ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
32     ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
33     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
34     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
35     ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
36 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
37     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
38     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
39     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
40     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
41     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
42 gezelter 1224 obj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
43     ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
44     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
45     ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
46 gezelter 1269 obj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
47     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
48     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
49     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
50     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
51     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
52     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
53     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
54     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
55     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
56     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
57     ../libBASS/simError.h
58     obj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
59     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
60     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
61     ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
62     obj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
63     ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
64     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
65     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
66     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
67     ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
68     ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
69     ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
70     ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
71     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
72     ./fortranWrapDefines.hpp ./fSimulation.h
73 gezelter 1097 obj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
74 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
75     ../libBASS/simError.h ./MatVec3.h
76 gezelter 1224 obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
77     ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
78     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
79 tim 1119 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
80     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
81 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
82 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
83     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
84     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
85     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
86     ./fortranWrappers.hpp
87 gezelter 1097 obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
88 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
89     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
90     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
91     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
92 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
93 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
94     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
95     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
96     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
97     ../libBASS/simError.h
98 gezelter 1224 obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
99     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
100     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
101 gezelter 1097 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
102     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
103 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
104 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
105     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
106     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
107     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
108     ../libBASS/simError.h
109 gezelter 1097 obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
110 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
111     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
112     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
113     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
114 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
115 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
116     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
117     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
118     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
119     ./fortranWrappers.hpp
120 gezelter 1269 obj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
121 gezelter 1224 obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
122     obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
123     ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
124     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
125     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
126     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
127     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
128 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
129     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
130     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
131     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
132 gezelter 1224 obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
133     ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
134     ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
135     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
136     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
137     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
138     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
139 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
140     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
141     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h ./fForceField.h
142 gezelter 1224 obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
143     obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
144     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
145     ./DirectionalAtom.hpp ./AbstractClasses.hpp
146     obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
147     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
148     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
149     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
150     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
151     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
152 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
153     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
154     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
155     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
156     ../libBASS/simError.h
157     obj/Integrator$(O) : ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
158     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
159     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
160     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
161     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
162 tim 1268 ./SimState.hpp ./BaseVisitor.hpp ./Roll.hpp ./Vector3d.hpp ./Integrator.hpp \
163     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
164     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
165     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
166     ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
167     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
168     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
169     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
170     ../libBASS/simError.h
171 gezelter 1224 obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
172 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
173     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
174     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
175     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
176 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
177 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
178     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
179     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
180     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
181     ./fortranWrappers.hpp
182 gezelter 1269 obj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
183     ./Euler3.hpp
184 gezelter 1224 obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
185 tim 1119 obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
186     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
187     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
188     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
189     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
190 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
191 tim 1234 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
192     ../libBASS/simError.h
193 gezelter 1224 obj/mpiSimulation$(O) : ./mpiSimulation.cpp
194     obj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
195     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
196     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
197     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
198     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
199     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
200 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
201     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
202     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
203     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
204 gezelter 1224 ./ZConsWriter.hpp ../libBASS/simError.h
205 tim 1119 obj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
206     ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
207     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
208 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
209     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
210     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
211 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
212     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
213     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
214     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
215     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
216 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
217 tim 1119 obj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
218     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
219     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
220     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
221     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
222 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
223 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
224     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
225     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
226     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
227 gezelter 1199 ./ZConsWriter.hpp ../libBASS/simError.h
228 gezelter 1097 obj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
229 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
230     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
231 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
232     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
233     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
234 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
235     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
236     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
237     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
238     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
239 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
240 tim 1119 obj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
241     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
242     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
243     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
244     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
245 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
246 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
247     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
248     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
249     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
250 gezelter 1199 ./ZConsWriter.hpp ../libBASS/simError.h
251 gezelter 1097 obj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
252 tim 1119 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
253     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
254 gezelter 1097 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
255     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
256 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
257 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
258     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
259     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
260     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
261     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
262     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./ShakeMin.hpp \
263     ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
264     ./ConstraintIterator.hpp
265 gezelter 1224 obj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
266     ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
267     ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
268     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
269     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
270     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
271 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
272     ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
273     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
274     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
275 tim 1119 obj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
276     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
277     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
278     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
279     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
280 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
281 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
282     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
283     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
284     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
285     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
286     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
287 gezelter 1269 obj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
288     ./Quaternion.hpp
289 gezelter 1224 obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
290 gezelter 1269 obj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
291     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
292     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
293     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
294     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
295     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
296     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
297     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
298     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
299     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
300     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
301 gezelter 1224 obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
302     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
303     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
304     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
305     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
306     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
307 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
308     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
309     ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
310     ./fSimulation.h ../libBASS/simError.h
311 gezelter 1224 obj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
312     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
313     ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
314     ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
315     obj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
316     ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
317     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
318     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
319 gezelter 1269 obj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
320     ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
321     ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
322     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
323     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
324     ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
325     ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
326     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
327     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
328     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
329     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
330     ./fortranWrapDefines.hpp ./fSimulation.h
331 gezelter 1097 obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
332 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
333     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
334     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
335 gezelter 1097 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
336 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
337 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
338     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
339     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
340     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
341     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
342     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
343 gezelter 1269 obj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
344     ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
345     ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
346     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
347     ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
348     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
349     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
350     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
351     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
352     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
353     ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
354     obj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
355     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
356     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
357     ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
358     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
359     ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
360     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
361     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
362     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
363     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
364     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
365 gezelter 1224 obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
366     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
367     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
368     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
369     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
370     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
371 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
372     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
373     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
374     ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
375     ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h \
376     ./ConstraintManager.hpp ./ConstraintIterator.hpp
377 gezelter 1224 obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
378     ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
379     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
380     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
381     ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
382     ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
383     ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
384     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
385     ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
386 tim 1234 ./AbstractClasses.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
387     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ./Restraints.hpp \
388     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
389     ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
390     ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
391 tim 1268 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp ./Roll.hpp \
392     ./Vector3d.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h \
393     ./NVT.cpp ../libBASS/simError.h ./NPTf.cpp ./MatVec3.h ../libBASS/simError.h \
394     ./NPT.cpp ../libBASS/simError.h ./NPTi.cpp ../libBASS/simError.h ./NPTxyz.cpp \
395     ../libBASS/simError.h ./ZConstraint.cpp ../libBASS/simError.h \
396     ../libBASS/parse_me.h ../libBASS/simError.h ./OOPSEMinimizer.hpp \
397     ./MinimizerParameterSet.hpp ./ConstraintManager.hpp
398 gezelter 1224 obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
399     obj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
400     obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
401     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
402     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
403     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
404     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
405     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
406 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
407     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
408     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
409     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
410     ../libBASS/simError.h
411 gezelter 1224 obj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
412     obj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
413     ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
414     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
415     ../libBASS/AtomStamp.hpp ../libBASS/simError.h
416     obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
417     ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
418     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
419     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
420     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
421     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
422 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
423     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
424     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
425     ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
426     ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
427     ../libBASS/simError.h ./MatVec3.h
428 gezelter 1224 obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
429     ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
430     obj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
431     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
432     ./AbstractClasses.hpp
433     obj/Utility$(O) : ./Utility.cpp ./Utility.hpp
434 gezelter 1269 obj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
435 gezelter 1224 obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
436     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
437     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
438     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
439     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
440     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
441 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
442     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
443     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
444     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
445     ./fortranWrappers.hpp
446 gezelter 1097 obj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
447 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
448     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
449     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
450     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
451 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
452 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
453     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
454     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
455     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
456     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
457     ./ZConsWriter.hpp ../libBASS/simError.h
458 gezelter 1224 obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
459     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
460     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
461     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
462 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
463 gezelter 1224 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
464 tim 1234 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp \
465     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
466     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
467     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
468     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
469 gezelter 1224 ../libBASS/simError.h
470 tim 1119 obj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
471     ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
472     ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
473 gezelter 1097 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
474     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
475 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
476 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
477     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
478     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
479     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
480     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
481     ./ZConsWriter.hpp
482 gezelter 1224 obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
483     ../libBASS/simError.h
484 gezelter 1097 MPIobj/mpiForceField$(O) : ./mpiForceField.c
485 tim 1119 MPIobj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
486 gezelter 1097 MPIobj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
487 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
488 gezelter 1224 MPIobj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
489     ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
490     ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
491     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
492 gezelter 1097 MPIobj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
493 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
494 gezelter 1097 MPIobj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
495 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
496     ./AbstractClasses.hpp ../libBASS/simError.h
497 gezelter 1097 MPIobj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
498 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
499 gezelter 1097 MPIobj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
500 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
501     ./AbstractClasses.hpp
502 gezelter 1269 MPIobj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
503     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
504     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
505     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
506     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
507     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
508     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
509     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
510     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
511     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
512 gezelter 1224 MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
513     ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
514     ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
515     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
516     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
517     ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
518 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
519     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
520     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
521     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
522     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
523     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
524 gezelter 1224 MPIobj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
525     ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
526     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
527     ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
528 gezelter 1269 MPIobj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
529     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
530     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
531     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
532     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
533     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
534     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
535     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
536     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
537     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
538     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
539     ../libBASS/simError.h
540     MPIobj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
541     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
542     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
543     ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
544     MPIobj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
545     ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
546     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
547     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
548     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
549     ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
550     ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
551     ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
552     ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
553     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
554     ./fortranWrapDefines.hpp ./fSimulation.h
555 gezelter 1097 MPIobj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
556 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
557     ../libBASS/simError.h ./MatVec3.h
558 gezelter 1224 MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
559     ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
560     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
561 tim 1119 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
562     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
563 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
564 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
565     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
566     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
567     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
568     ./fortranWrappers.hpp
569 gezelter 1097 MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
570 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
571     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
572     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
573     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
574 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
575 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
576     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
577     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
578     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
579     ../libBASS/simError.h
580 gezelter 1224 MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
581     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
582     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
583 gezelter 1097 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
584     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
585 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
586 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
587     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
588     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
589     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
590     ../libBASS/simError.h
591 gezelter 1097 MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
592 tim 1119 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
593     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
594     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
595     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
596 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
597 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
598     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
599     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
600     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
601     ./fortranWrappers.hpp
602 gezelter 1269 MPIobj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
603 gezelter 1224 MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
604     MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
605     ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
606     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
607     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
608     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
609     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
610 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
611     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
612     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
613     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
614 gezelter 1224 MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
615     ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
616     ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
617     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
618     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
619     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
620     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
621 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
622     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
623     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h ./fForceField.h
624 gezelter 1224 MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
625     MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
626     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
627     ./DirectionalAtom.hpp ./AbstractClasses.hpp
628     MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
629     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
630     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
631     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
632     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
633     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
634 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
635     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
636     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
637     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
638     ../libBASS/simError.h
639     MPIobj/Integrator$(O) : ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
640     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
641     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
642     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
643     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
644 tim 1268 ./SimState.hpp ./BaseVisitor.hpp ./Roll.hpp ./Vector3d.hpp ./Integrator.hpp \
645     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
646     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
647     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
648     ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
649     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
650     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
651     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
652     ../libBASS/simError.h
653 gezelter 1224 MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
654 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
655     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
656     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
657     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
658 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
659 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
660     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
661     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
662     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
663     ./fortranWrappers.hpp
664 gezelter 1269 MPIobj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
665     ./Euler3.hpp
666 gezelter 1224 MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
667 tim 1119 MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
668     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
669     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
670     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
671     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
672 gezelter 1154 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
673 tim 1234 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
674     ../libBASS/simError.h
675 gezelter 1224 MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
676     MPIobj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
677     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
678     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
679     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
680     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
681     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
682 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
683     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
684     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
685     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
686 gezelter 1224 ./ZConsWriter.hpp ../libBASS/simError.h
687 tim 1119 MPIobj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
688     ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
689     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
690 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
691     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
692     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
693 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
694     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
695     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
696     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
697     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
698 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
699 tim 1119 MPIobj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
700     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
701     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
702     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
703     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
704 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
705 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
706     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
707     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
708     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
709 gezelter 1199 ./ZConsWriter.hpp ../libBASS/simError.h
710 gezelter 1097 MPIobj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
711 tim 1119 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
712     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
713 gezelter 1097 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
714     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
715     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
716 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
717     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
718     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
719     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
720     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
721 gezelter 1154 ./ZConsWriter.hpp ../libBASS/simError.h
722 tim 1119 MPIobj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
723     ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
724     ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
725     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
726     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
727 tim 1158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
728 tim 1234 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
729     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
730     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
731     ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
732 gezelter 1199 ./ZConsWriter.hpp ../libBASS/simError.h
733 gezelter 1097 MPIobj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
734 tim 1119 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
735     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
736 gezelter 1097 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
737     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
738 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
739 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
740     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
741     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
742     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
743     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
744     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./ShakeMin.hpp \
745     ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
746     ./ConstraintIterator.hpp
747 gezelter 1224 MPIobj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
748     ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
749     ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
750     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
751     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
752     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
753 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
754     ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
755     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
756     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
757 tim 1119 MPIobj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
758     ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
759     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
760     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
761     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
762 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
763 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
764     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
765     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
766     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
767     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
768     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
769 gezelter 1269 MPIobj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
770     ./Quaternion.hpp
771 gezelter 1224 MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
772 gezelter 1269 MPIobj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
773     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
774     ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
775     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
776     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
777     ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
778     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
779     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
780     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
781     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
782     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
783 gezelter 1224 MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
784     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
785     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
786     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
787     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
788     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
789 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
790     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
791     ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
792     ./fSimulation.h ../libBASS/simError.h
793 gezelter 1224 MPIobj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
794     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
795     ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
796     ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
797     MPIobj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
798     ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
799     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
800     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
801 gezelter 1269 MPIobj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
802     ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
803     ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
804     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
805     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
806     ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
807     ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
808     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
809     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
810     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
811     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
812     ./fortranWrapDefines.hpp ./fSimulation.h
813 gezelter 1097 MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
814 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
815     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
816     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
817 gezelter 1097 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
818 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
819 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
820     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
821     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
822     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
823     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
824     ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
825 gezelter 1269 MPIobj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
826     ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
827     ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
828     ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
829     ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
830     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
831     ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
832     ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
833     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
834     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
835     ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
836     MPIobj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
837     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
838     ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
839     ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
840     ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
841     ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
842     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
843     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
844     ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
845     ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
846     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
847 gezelter 1224 MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
848     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
849     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
850     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
851     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
852     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
853 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
854     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
855     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
856     ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
857     ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h \
858     ./ConstraintManager.hpp ./ConstraintIterator.hpp
859 gezelter 1224 MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
860     ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
861     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
862     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
863     ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
864     ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
865     ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
866     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
867     ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
868 tim 1234 ./AbstractClasses.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
869     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ./Restraints.hpp \
870     ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
871     ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
872     ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
873 tim 1268 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp ./Roll.hpp \
874     ./Vector3d.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h \
875     ./NVT.cpp ../libBASS/simError.h ./NPTf.cpp ./MatVec3.h ../libBASS/simError.h \
876     ./NPT.cpp ../libBASS/simError.h ./NPTi.cpp ../libBASS/simError.h ./NPTxyz.cpp \
877     ../libBASS/simError.h ./ZConstraint.cpp ../libBASS/simError.h \
878     ../libBASS/parse_me.h ../libBASS/simError.h ./OOPSEMinimizer.hpp \
879     ./MinimizerParameterSet.hpp ./ConstraintManager.hpp
880 gezelter 1224 MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
881     MPIobj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
882     MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
883     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
884     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
885     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
886     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
887     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
888 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
889     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
890     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
891     ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
892     ../libBASS/simError.h
893 gezelter 1224 MPIobj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
894     MPIobj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
895     ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
896     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
897     ../libBASS/AtomStamp.hpp ../libBASS/simError.h
898     MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
899     ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
900     ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
901     ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
902     ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
903     ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
904 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
905     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
906     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
907     ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
908     ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
909     ../libBASS/simError.h ./MatVec3.h
910 gezelter 1224 MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
911     ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
912     MPIobj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
913     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
914     ./AbstractClasses.hpp
915     MPIobj/Utility$(O) : ./Utility.cpp ./Utility.hpp
916 gezelter 1269 MPIobj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
917 gezelter 1224 MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
918     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
919     ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
920     ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
921     ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
922     ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
923 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
924     ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
925     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
926     ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
927     ./fortranWrappers.hpp
928 gezelter 1097 MPIobj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
929 tim 1119 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
930     ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
931     ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
932     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
933 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
934 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
935     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
936     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
937     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
938     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
939     ./ZConsWriter.hpp ../libBASS/simError.h
940 gezelter 1224 MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
941     ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
942     ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
943     ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
944 gezelter 1154 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
945 gezelter 1224 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
946 tim 1234 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp \
947     ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
948     ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
949     ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
950     ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
951 gezelter 1224 ../libBASS/simError.h
952 tim 1119 MPIobj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
953     ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
954     ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
955 gezelter 1097 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
956     ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
957 gezelter 1154 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
958 tim 1234 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
959     ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
960     ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
961     ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
962     ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
963     ./ZConsWriter.hpp
964 gezelter 1224 MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
965     ../libBASS/simError.h