1 |
|
# DO NOT DELETE THIS LINE - used by make depend |
2 |
|
obj/mpiForceField$(O) : ./mpiForceField.c |
3 |
+ |
obj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h |
4 |
|
obj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h |
5 |
< |
obj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp |
6 |
< |
obj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./AbstractClasses.hpp |
5 |
> |
obj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \ |
6 |
> |
./StuntDouble.hpp |
7 |
> |
obj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
8 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp |
9 |
|
obj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \ |
10 |
< |
./AbstractClasses.hpp ../libBASS/simError.h |
11 |
< |
obj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./AbstractClasses.hpp |
10 |
> |
./StuntDouble.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \ |
11 |
> |
../libBASS/simError.h |
12 |
> |
obj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
13 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp |
14 |
|
obj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \ |
15 |
< |
./AbstractClasses.hpp |
15 |
> |
./StuntDouble.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp |
16 |
|
obj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \ |
17 |
< |
../libBASS/simError.h |
17 |
> |
./StuntDouble.hpp ./DirectionalAtom.hpp ../libBASS/simError.h ./MatVec3.h |
18 |
|
obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \ |
19 |
< |
./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \ |
20 |
< |
../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
21 |
< |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
22 |
< |
../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \ |
19 |
> |
./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
20 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
21 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
22 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
23 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
24 |
|
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
25 |
< |
./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h |
25 |
> |
./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \ |
26 |
> |
../libBASS/simError.h |
27 |
> |
obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \ |
28 |
> |
./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
29 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
30 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
31 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
32 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
33 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
34 |
> |
./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \ |
35 |
> |
../libBASS/simError.h |
36 |
|
obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp |
37 |
|
obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \ |
38 |
< |
./SimState.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \ |
39 |
< |
../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
40 |
< |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
41 |
< |
../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \ |
26 |
< |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
27 |
< |
./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h |
28 |
< |
obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp \ |
29 |
< |
./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
30 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
38 |
> |
./SimState.hpp ./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
39 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
40 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
41 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \ |
42 |
|
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
43 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
44 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
43 |
> |
./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \ |
44 |
> |
./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp \ |
45 |
> |
./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h |
46 |
> |
obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
47 |
> |
./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
48 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
49 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
50 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
51 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
52 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
53 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
54 |
|
./fortranWrappers.hpp |
55 |
< |
obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp \ |
56 |
< |
./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
57 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
58 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
59 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
60 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
55 |
> |
obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \ |
56 |
> |
./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
57 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
58 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
59 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
60 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
61 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
62 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
63 |
|
./fortranWrappers.hpp |
64 |
< |
obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp ./Molecule.hpp \ |
65 |
< |
./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
66 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
67 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
68 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
69 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./fSimulation.h ../libBASS/simError.h \ |
70 |
< |
./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h |
64 |
> |
obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \ |
65 |
> |
./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
66 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
67 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
68 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
69 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
70 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
71 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
72 |
> |
./fortranWrappers.hpp |
73 |
> |
obj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
74 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \ |
75 |
> |
./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp ../libBASS/simError.h \ |
76 |
> |
./MatVec3.h |
77 |
> |
obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \ |
78 |
> |
./StuntDouble.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
79 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
80 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
81 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
82 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
83 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
84 |
> |
./fSimulation.h ./GenericData.hpp ./fSimulation.h ../libBASS/simError.h \ |
85 |
> |
./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h |
86 |
|
obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \ |
87 |
|
../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \ |
88 |
|
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
89 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ../libBASS/Globals.hpp \ |
90 |
< |
../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp ../libBASS/ZconStamp.hpp \ |
91 |
< |
./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp \ |
92 |
< |
./SRI.hpp ./AbstractClasses.hpp ./Exclude.hpp ./fSimulation.h \ |
93 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ./ReadWrite.hpp \ |
94 |
< |
./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp ./Integrator.cpp \ |
95 |
< |
./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp \ |
96 |
< |
./NPTfm.cpp ./NPTi.cpp ./NPTim.cpp ./ZConstraint.cpp ../libBASS/parse_me.h |
89 |
> |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
90 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/Globals.hpp ../libBASS/Component.hpp \ |
91 |
> |
../libBASS/LinkedCommand.hpp ../libBASS/ZconStamp.hpp ./ForceFields.hpp \ |
92 |
> |
./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
93 |
> |
./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \ |
94 |
> |
./Exclude.hpp ./SkipList.hpp ./fSimulation.h ./fortranWrapDefines.hpp \ |
95 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h ./ReadWrite.hpp ./Thermo.hpp \ |
96 |
> |
./randomSPRNG.hpp ./AllIntegrator.hpp ./Integrator.cpp ./Integrator.hpp \ |
97 |
> |
./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp ./MatVec3.h \ |
98 |
> |
./NPT.cpp ./NPTi.cpp ./NPTxyz.cpp ./ZConstraint.cpp ../libBASS/parse_me.h \ |
99 |
> |
./OOPSEMinimizer.hpp ./MinimizerParameterSet.hpp |
100 |
|
obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \ |
101 |
< |
./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \ |
102 |
< |
../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
103 |
< |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
104 |
< |
../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \ |
101 |
> |
./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
102 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
103 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
104 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
105 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
106 |
|
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
107 |
< |
./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h |
67 |
< |
obj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \ |
68 |
< |
./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
69 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
70 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \ |
71 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
72 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \ |
73 |
< |
./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \ |
107 |
> |
./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \ |
108 |
|
../libBASS/simError.h |
109 |
< |
obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./SRI.hpp \ |
110 |
< |
./AbstractClasses.hpp ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
111 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
112 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
113 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
114 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./randomSPRNG.hpp ./Integrator.hpp \ |
109 |
> |
obj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./Atom.hpp ./SimState.hpp \ |
110 |
> |
./DirectionalAtom.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
111 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ../libBASS/simError.h |
112 |
> |
obj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \ |
113 |
> |
./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
114 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
115 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
116 |
> |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
117 |
> |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
118 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
119 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
120 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h |
121 |
> |
obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
122 |
> |
./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp ./SimInfo.hpp \ |
123 |
> |
./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
124 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
125 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
126 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
127 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
128 |
> |
./fSimulation.h ./GenericData.hpp ./randomSPRNG.hpp ./Integrator.hpp \ |
129 |
|
./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \ |
130 |
|
../libBASS/simError.h |
131 |
|
obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \ |
132 |
< |
./SimState.hpp ./AbstractClasses.hpp |
133 |
< |
obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \ |
134 |
< |
./AbstractClasses.hpp |
132 |
> |
./SimState.hpp ./StuntDouble.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp |
133 |
> |
obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
134 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp |
135 |
|
obj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \ |
136 |
< |
./AbstractClasses.hpp |
137 |
< |
obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp \ |
138 |
< |
./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
139 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
140 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
141 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
142 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
136 |
> |
./StuntDouble.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp |
137 |
> |
obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
138 |
> |
./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
139 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
140 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
141 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
142 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
143 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
144 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
145 |
|
./fortranWrappers.hpp |
146 |
|
obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h |
147 |
< |
obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h |
147 |
> |
obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \ |
148 |
> |
./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \ |
149 |
> |
./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
150 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
151 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
152 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \ |
153 |
> |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
154 |
> |
./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \ |
155 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h |
156 |
|
obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \ |
157 |
< |
./Atom.hpp ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \ |
158 |
< |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
157 |
> |
./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
158 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
159 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
160 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \ |
161 |
> |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
162 |
> |
./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \ |
163 |
> |
./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp \ |
164 |
> |
./fForceField.h ./fortranWrappers.hpp |
165 |
> |
obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \ |
166 |
> |
./StuntDouble.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \ |
167 |
> |
../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
168 |
|
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
169 |
< |
../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \ |
169 |
> |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
170 |
> |
../libBASS/simError.h |
171 |
> |
obj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
172 |
> |
./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp ./SimInfo.hpp \ |
173 |
> |
./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
174 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
175 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
176 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
177 |
|
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
178 |
< |
./GenericData.hpp ./fForceField.h ./fortranWrappers.hpp |
179 |
< |
obj/mpiSimulation$(O) : ./mpiSimulation.cpp |
180 |
< |
obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./SRI.hpp \ |
181 |
< |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
182 |
< |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
183 |
< |
../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/simError.h |
178 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
179 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp \ |
180 |
> |
../libBASS/simError.h |
181 |
> |
obj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./SRI.hpp \ |
182 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
183 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
184 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
185 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
186 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
187 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
188 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
189 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp \ |
190 |
> |
../libBASS/simError.h |
191 |
> |
obj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
192 |
> |
./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp ./SimInfo.hpp \ |
193 |
> |
./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
194 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
195 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
196 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
197 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
198 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
199 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp \ |
200 |
> |
../libBASS/simError.h |
201 |
> |
obj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./SRI.hpp \ |
202 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
203 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
204 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
205 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
206 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
207 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
208 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
209 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp \ |
210 |
> |
../libBASS/simError.h |
211 |
|
obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp |
212 |
|
obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \ |
213 |
< |
./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
214 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
215 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \ |
216 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
217 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \ |
218 |
< |
./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \ |
219 |
< |
../libBASS/simError.h |
213 |
> |
./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
214 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
215 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
216 |
> |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
217 |
> |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
218 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
219 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
220 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h |
221 |
|
obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \ |
222 |
|
../libBASS/simError.h |
223 |
+ |
obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp |
224 |
|
obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp |
225 |
< |
MPIobj/mpiForceField$(O) : ./mpiForceField.c |
226 |
< |
MPIobj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h |
227 |
< |
MPIobj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp |
228 |
< |
MPIobj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./AbstractClasses.hpp |
229 |
< |
MPIobj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \ |
230 |
< |
./AbstractClasses.hpp ../libBASS/simError.h |
231 |
< |
MPIobj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./AbstractClasses.hpp |
232 |
< |
MPIobj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \ |
233 |
< |
./AbstractClasses.hpp |
234 |
< |
MPIobj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \ |
235 |
< |
../libBASS/simError.h |
236 |
< |
MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \ |
237 |
< |
./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \ |
225 |
> |
obj/mpiSimulation$(O) : ./mpiSimulation.cpp |
226 |
> |
obj/Utility$(O) : ./Utility.cpp ./Utility.hpp |
227 |
> |
obj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \ |
228 |
> |
./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp \ |
229 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
230 |
> |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
231 |
> |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
232 |
> |
../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ./SimInfo.hpp ./Exclude.hpp \ |
233 |
> |
./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \ |
234 |
> |
./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp \ |
235 |
> |
./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \ |
236 |
> |
./ZConsWriter.hpp ./MinimizerParameterSet.hpp |
237 |
> |
obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \ |
238 |
> |
./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./Molecule.hpp \ |
239 |
> |
./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \ |
240 |
|
../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
241 |
|
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
242 |
< |
../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \ |
242 |
> |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
243 |
> |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
244 |
|
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
245 |
< |
./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h |
246 |
< |
MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp |
247 |
< |
MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \ |
248 |
< |
./SimState.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \ |
249 |
< |
../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
245 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
246 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp \ |
247 |
> |
./Utility.hpp |
248 |
> |
obj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \ |
249 |
> |
./SimState.hpp ./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
250 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
251 |
|
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
252 |
< |
../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \ |
252 |
> |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
253 |
> |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
254 |
|
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
255 |
< |
./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h |
256 |
< |
MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp \ |
257 |
< |
./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
258 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
259 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
260 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
261 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
262 |
< |
./fortranWrappers.hpp |
263 |
< |
MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp \ |
264 |
< |
./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
265 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
266 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
267 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
268 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
269 |
< |
./fortranWrappers.hpp |
270 |
< |
MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp ./Molecule.hpp \ |
271 |
< |
./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
272 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
255 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
256 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp \ |
257 |
> |
./Utility.hpp |
258 |
> |
obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \ |
259 |
> |
./SimState.hpp ./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
260 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
261 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
262 |
> |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
263 |
> |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
264 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
265 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
266 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp \ |
267 |
> |
./Utility.hpp |
268 |
> |
obj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \ |
269 |
> |
./SimState.hpp ./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
270 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
271 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
272 |
> |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
273 |
> |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
274 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
275 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
276 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h |
277 |
> |
MPIobj/mpiForceField$(O) : ./mpiForceField.c |
278 |
> |
MPIobj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h |
279 |
> |
MPIobj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h |
280 |
> |
MPIobj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \ |
281 |
> |
./StuntDouble.hpp |
282 |
> |
MPIobj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
283 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp |
284 |
> |
MPIobj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \ |
285 |
> |
./StuntDouble.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \ |
286 |
> |
../libBASS/simError.h |
287 |
> |
MPIobj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
288 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp |
289 |
> |
MPIobj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \ |
290 |
> |
./StuntDouble.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp |
291 |
> |
MPIobj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \ |
292 |
> |
./StuntDouble.hpp ./DirectionalAtom.hpp ../libBASS/simError.h ./MatVec3.h |
293 |
> |
MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \ |
294 |
> |
./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
295 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
296 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
297 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
298 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
299 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
300 |
> |
./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \ |
301 |
> |
../libBASS/simError.h |
302 |
> |
MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \ |
303 |
> |
./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
304 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
305 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
306 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
307 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
308 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
309 |
> |
./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \ |
310 |
> |
../libBASS/simError.h |
311 |
> |
MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp |
312 |
> |
MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \ |
313 |
> |
./SimState.hpp ./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
314 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
315 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
316 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \ |
317 |
|
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
318 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
319 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./fSimulation.h ../libBASS/simError.h \ |
320 |
< |
./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h |
318 |
> |
./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \ |
319 |
> |
./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp \ |
320 |
> |
./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h |
321 |
> |
MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
322 |
> |
./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
323 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
324 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
325 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
326 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
327 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
328 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
329 |
> |
./fortranWrappers.hpp |
330 |
> |
MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \ |
331 |
> |
./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
332 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
333 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
334 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
335 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
336 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
337 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
338 |
> |
./fortranWrappers.hpp |
339 |
> |
MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \ |
340 |
> |
./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
341 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
342 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
343 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
344 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
345 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
346 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
347 |
> |
./fortranWrappers.hpp |
348 |
> |
MPIobj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
349 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \ |
350 |
> |
./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp ../libBASS/simError.h \ |
351 |
> |
./MatVec3.h |
352 |
> |
MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \ |
353 |
> |
./StuntDouble.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
354 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
355 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
356 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
357 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
358 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
359 |
> |
./fSimulation.h ./GenericData.hpp ./fSimulation.h ../libBASS/simError.h \ |
360 |
> |
./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h |
361 |
|
MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \ |
362 |
|
../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \ |
363 |
|
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
364 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ../libBASS/Globals.hpp \ |
365 |
< |
../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp ../libBASS/ZconStamp.hpp \ |
366 |
< |
./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp \ |
367 |
< |
./SRI.hpp ./AbstractClasses.hpp ./Exclude.hpp ./fSimulation.h \ |
368 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ./ReadWrite.hpp \ |
369 |
< |
./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp ./Integrator.cpp \ |
370 |
< |
./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp \ |
371 |
< |
./NPTfm.cpp ./NPTi.cpp ./NPTim.cpp ./ZConstraint.cpp ../libBASS/parse_me.h |
364 |
> |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
365 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/Globals.hpp ../libBASS/Component.hpp \ |
366 |
> |
../libBASS/LinkedCommand.hpp ../libBASS/ZconStamp.hpp ./ForceFields.hpp \ |
367 |
> |
./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
368 |
> |
./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \ |
369 |
> |
./Exclude.hpp ./SkipList.hpp ./fSimulation.h ./fortranWrapDefines.hpp \ |
370 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h ./ReadWrite.hpp ./Thermo.hpp \ |
371 |
> |
./randomSPRNG.hpp ./AllIntegrator.hpp ./Integrator.cpp ./Integrator.hpp \ |
372 |
> |
./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp ./MatVec3.h \ |
373 |
> |
./NPT.cpp ./NPTi.cpp ./NPTxyz.cpp ./ZConstraint.cpp ../libBASS/parse_me.h \ |
374 |
> |
./OOPSEMinimizer.hpp ./MinimizerParameterSet.hpp |
375 |
|
MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \ |
376 |
< |
./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \ |
377 |
< |
../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
378 |
< |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
379 |
< |
../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \ |
376 |
> |
./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
377 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
378 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
379 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
380 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
381 |
|
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
382 |
< |
./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h |
187 |
< |
MPIobj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \ |
188 |
< |
./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
189 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
190 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \ |
191 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
192 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \ |
193 |
< |
./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \ |
382 |
> |
./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \ |
383 |
|
../libBASS/simError.h |
384 |
< |
MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./SRI.hpp \ |
385 |
< |
./AbstractClasses.hpp ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
386 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
387 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
388 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
389 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./randomSPRNG.hpp ./Integrator.hpp \ |
384 |
> |
MPIobj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./Atom.hpp ./SimState.hpp \ |
385 |
> |
./DirectionalAtom.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
386 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ../libBASS/simError.h |
387 |
> |
MPIobj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \ |
388 |
> |
./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
389 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
390 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
391 |
> |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
392 |
> |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
393 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
394 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
395 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h |
396 |
> |
MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
397 |
> |
./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp ./SimInfo.hpp \ |
398 |
> |
./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
399 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
400 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
401 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
402 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
403 |
> |
./fSimulation.h ./GenericData.hpp ./randomSPRNG.hpp ./Integrator.hpp \ |
404 |
|
./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \ |
405 |
|
../libBASS/simError.h |
406 |
|
MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \ |
407 |
< |
./SimState.hpp ./AbstractClasses.hpp |
408 |
< |
MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \ |
409 |
< |
./AbstractClasses.hpp |
407 |
> |
./SimState.hpp ./StuntDouble.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp |
408 |
> |
MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
409 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp |
410 |
|
MPIobj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \ |
411 |
< |
./AbstractClasses.hpp |
412 |
< |
MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp \ |
413 |
< |
./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
414 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
415 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
416 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
417 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
411 |
> |
./StuntDouble.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp |
412 |
> |
MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
413 |
> |
./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \ |
414 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \ |
415 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
416 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
417 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
418 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
419 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \ |
420 |
|
./fortranWrappers.hpp |
421 |
|
MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h |
422 |
< |
MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h |
422 |
> |
MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \ |
423 |
> |
./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \ |
424 |
> |
./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
425 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
426 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
427 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \ |
428 |
> |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
429 |
> |
./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \ |
430 |
> |
./fSimulation.h ./GenericData.hpp ./fForceField.h |
431 |
|
MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \ |
432 |
< |
./Atom.hpp ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \ |
433 |
< |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
432 |
> |
./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
433 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
434 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
435 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \ |
436 |
> |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \ |
437 |
> |
./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \ |
438 |
> |
./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp \ |
439 |
> |
./fForceField.h ./fortranWrappers.hpp |
440 |
> |
MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \ |
441 |
> |
./StuntDouble.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \ |
442 |
> |
../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
443 |
|
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
444 |
< |
../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \ |
444 |
> |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
445 |
> |
../libBASS/simError.h |
446 |
> |
MPIobj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
447 |
> |
./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp ./SimInfo.hpp \ |
448 |
> |
./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
449 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
450 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
451 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
452 |
|
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
453 |
< |
./GenericData.hpp ./fForceField.h ./fortranWrappers.hpp |
454 |
< |
MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp |
455 |
< |
MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./SRI.hpp \ |
456 |
< |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
457 |
< |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
458 |
< |
../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/simError.h |
453 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
454 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp \ |
455 |
> |
../libBASS/simError.h |
456 |
> |
MPIobj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./SRI.hpp \ |
457 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
458 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
459 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
460 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
461 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
462 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
463 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
464 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp \ |
465 |
> |
../libBASS/simError.h |
466 |
> |
MPIobj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \ |
467 |
> |
./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp ./SimInfo.hpp \ |
468 |
> |
./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
469 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
470 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
471 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
472 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
473 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
474 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp \ |
475 |
> |
../libBASS/simError.h |
476 |
> |
MPIobj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./SRI.hpp \ |
477 |
> |
./DirectionalAtom.hpp ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \ |
478 |
> |
../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \ |
479 |
> |
../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \ |
480 |
> |
../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
481 |
> |
./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
482 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
483 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
484 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp \ |
485 |
> |
../libBASS/simError.h |
486 |
|
MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp |
487 |
|
MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \ |
488 |
< |
./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
489 |
< |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
490 |
< |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \ |
491 |
< |
../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \ |
492 |
< |
./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \ |
493 |
< |
./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \ |
494 |
< |
../libBASS/simError.h |
488 |
> |
./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
489 |
> |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
490 |
> |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
491 |
> |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
492 |
> |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
493 |
> |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
494 |
> |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
495 |
> |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h |
496 |
|
MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \ |
497 |
|
../libBASS/simError.h |
498 |
+ |
MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp |
499 |
|
MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp |
500 |
+ |
MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp |
501 |
+ |
MPIobj/Utility$(O) : ./Utility.cpp ./Utility.hpp |
502 |
+ |
MPIobj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \ |
503 |
+ |
./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp \ |
504 |
+ |
./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \ |
505 |
+ |
../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \ |
506 |
+ |
../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \ |
507 |
+ |
../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ./SimInfo.hpp ./Exclude.hpp \ |
508 |
+ |
./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \ |
509 |
+ |
./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp \ |
510 |
+ |
./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \ |
511 |
+ |
./ZConsWriter.hpp ./MinimizerParameterSet.hpp |
512 |
+ |
MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \ |
513 |
+ |
./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./Molecule.hpp \ |
514 |
+ |
./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \ |
515 |
+ |
../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
516 |
+ |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
517 |
+ |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
518 |
+ |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
519 |
+ |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
520 |
+ |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
521 |
+ |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp \ |
522 |
+ |
./Utility.hpp |
523 |
+ |
MPIobj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \ |
524 |
+ |
./SimState.hpp ./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
525 |
+ |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
526 |
+ |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
527 |
+ |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
528 |
+ |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
529 |
+ |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
530 |
+ |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
531 |
+ |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp \ |
532 |
+ |
./Utility.hpp |
533 |
+ |
MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \ |
534 |
+ |
./SimState.hpp ./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
535 |
+ |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
536 |
+ |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
537 |
+ |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
538 |
+ |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
539 |
+ |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
540 |
+ |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
541 |
+ |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp \ |
542 |
+ |
./Utility.hpp |
543 |
+ |
MPIobj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \ |
544 |
+ |
./SimState.hpp ./StuntDouble.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \ |
545 |
+ |
./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \ |
546 |
+ |
../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \ |
547 |
+ |
../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \ |
548 |
+ |
./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \ |
549 |
+ |
../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \ |
550 |
+ |
./fSimulation.h ./GenericData.hpp ./ForceFields.hpp ./fForceField.h ./Thermo.hpp \ |
551 |
+ |
./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h |