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root/group/trunk/OOPSE/libmdtools/Make.dep
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Comparing trunk/OOPSE/libmdtools/Make.dep (file contents):
Revision 780 by mmeineke, Mon Sep 22 21:23:25 2003 UTC vs.
Revision 940 by gezelter, Tue Jan 13 22:34:55 2004 UTC

# Line 16 | Line 16 | obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp
16   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
17   ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
18   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
19 < ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h
19 > ./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \
20 > ../libBASS/simError.h
21 > obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
22 > ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \
23 > ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
24 > ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
25 > ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
26 > ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
27 > ./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \
28 > ../libBASS/simError.h
29   obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
30   obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
31   ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \
# Line 24 | Line 33 | obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp
33   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
34   ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
35   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
36 < ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h
36 > ./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \
37 > ../libBASS/simError.h
38   obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp \
39   ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
40   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
41   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
42   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
43 < ./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \
44 < ./fortranWrappers.hpp
43 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./fForceField.h \
44 > ../libBASS/simError.h ./fortranWrappers.hpp
45   obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp \
46   ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
47   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
48   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
49   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
50 < ./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \
51 < ./fortranWrappers.hpp
50 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./fForceField.h \
51 > ../libBASS/simError.h ./fortranWrappers.hpp
52   obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp ./Molecule.hpp \
53   ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
54   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
55   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
56   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
57 < ./fortranWrapDefines.hpp ./GenericData.hpp ./fSimulation.h ../libBASS/simError.h \
58 < ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h
57 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./fSimulation.h \
58 > ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h
59   obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
60   ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
61   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
# Line 53 | Line 63 | obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../li
63   ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp ../libBASS/ZconStamp.hpp \
64   ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp \
65   ./SRI.hpp ./AbstractClasses.hpp ./Exclude.hpp ./fSimulation.h \
66 < ./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ./ReadWrite.hpp \
67 < ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp ./Integrator.cpp \
68 < ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp \
69 < ./NPT.cpp ./NPTi.cpp ./ZConstraint.cpp ../libBASS/parse_me.h
66 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./fForceField.h \
67 > ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
68 > ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h \
69 > ./NVT.cpp ./NPTf.cpp ./NPT.cpp ./NPTi.cpp ./NPTxyz.cpp ./ZConstraint.cpp \
70 > ../libBASS/parse_me.h
71   obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
72   ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \
73   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
74   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
75   ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
76   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
77 < ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h
77 > ./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \
78 > ../libBASS/simError.h
79   obj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
80   ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
81   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
82   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \
83   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
84 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
85 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
84 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
85 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
86   ../libBASS/simError.h
87   obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./SRI.hpp \
88   ./AbstractClasses.hpp ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
89   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
90   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
91   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
92 < ./fortranWrapDefines.hpp ./GenericData.hpp ./randomSPRNG.hpp ./Integrator.hpp \
93 < ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
94 < ../libBASS/simError.h
92 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./randomSPRNG.hpp \
93 > ./Integrator.hpp ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp \
94 > ./ZConsWriter.hpp ../libBASS/simError.h
95   obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
96   ./SimState.hpp ./AbstractClasses.hpp
97   obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
# Line 91 | Line 103 | obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp
103   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
104   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
105   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
106 < ./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \
107 < ./fortranWrappers.hpp
106 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./fForceField.h \
107 > ../libBASS/simError.h ./fortranWrappers.hpp
108   obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
109 < obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h
109 > obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
110 > ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
111 > ./Atom.hpp ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
112 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
113 > ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
114 > ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
115 > ../libBASS/BASS_interface.h ./fSimulation.h ./GenericData.hpp ./fForceField.h
116   obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
117   ./Atom.hpp ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
118   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
119   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
120   ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
121   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
122 < ./GenericData.hpp ./fForceField.h ./fortranWrappers.hpp
105 < obj/mpiSimulation$(O) : ./mpiSimulation.cpp
122 > ./fSimulation.h ./GenericData.hpp ./fForceField.h ./fortranWrappers.hpp
123   obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./SRI.hpp \
124   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
125   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
# Line 112 | Line 129 | obj/NPTf$(O) : ./NPTf.cpp ./Atom.hpp ./SimState.hpp ./
129   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
130   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
131   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
132 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
133 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
132 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
133 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
134   ./ZConsWriter.hpp ../libBASS/simError.h
135   obj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./SRI.hpp ./AbstractClasses.hpp \
136   ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
137   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
138   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
139   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
140 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
141 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
140 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
141 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
142   ./ZConsWriter.hpp ../libBASS/simError.h
143 < obj/NPTxym$(O) : ./NPTxym.cpp ./Atom.hpp ./SimState.hpp ./Molecule.hpp ./SRI.hpp \
144 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
145 < ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
146 < ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \
143 > obj/NPTxyz$(O) : ./NPTxyz.cpp ./Atom.hpp ./SimState.hpp ./SRI.hpp ./AbstractClasses.hpp \
144 > ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
145 > ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
146 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
147   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
148 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
149 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
148 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
149 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
150   ./ZConsWriter.hpp ../libBASS/simError.h
134 – obj/NPTzm$(O) : ./NPTzm.cpp ./Atom.hpp ./SimState.hpp ./Molecule.hpp ./SRI.hpp \
135 – ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
136 – ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
137 – ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \
138 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
139 – ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
140 – ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
141 – ./ZConsWriter.hpp ../libBASS/simError.h
151   obj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./SRI.hpp ./AbstractClasses.hpp \
152   ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
153   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
154   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
155   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
156 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
157 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
156 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
157 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
158   ./ZConsWriter.hpp ../libBASS/simError.h
159   obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
160   obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
# Line 153 | Line 162 | obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.h
162   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
163   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \
164   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
165 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
166 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
165 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
166 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
167   ../libBASS/simError.h
168   obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
169   ../libBASS/simError.h
170 + obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
171   obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
172   MPIobj/mpiForceField$(O) : ./mpiForceField.c
173   MPIobj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h
# Line 176 | Line 186 | MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.h
186   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
187   ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
188   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
189 < ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h
189 > ./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \
190 > ../libBASS/simError.h
191 > MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
192 > ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \
193 > ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
194 > ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
195 > ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
196 > ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
197 > ./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \
198 > ../libBASS/simError.h
199   MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
200   MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
201   ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \
# Line 184 | Line 203 | MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.c
203   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
204   ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
205   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
206 < ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h
206 > ./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \
207 > ../libBASS/simError.h
208   MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp \
209   ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
210   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
211   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
212   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
213 < ./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \
214 < ./fortranWrappers.hpp
213 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./fForceField.h \
214 > ../libBASS/simError.h ./fortranWrappers.hpp
215   MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp \
216   ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
217   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
218   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
219   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
220 < ./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \
221 < ./fortranWrappers.hpp
220 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./fForceField.h \
221 > ../libBASS/simError.h ./fortranWrappers.hpp
222   MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp ./Molecule.hpp \
223   ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
224   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
225   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
226   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
227 < ./fortranWrapDefines.hpp ./GenericData.hpp ./fSimulation.h ../libBASS/simError.h \
228 < ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h
227 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./fSimulation.h \
228 > ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h
229   MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
230   ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
231   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
# Line 213 | Line 233 | MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ..
233   ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp ../libBASS/ZconStamp.hpp \
234   ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp \
235   ./SRI.hpp ./AbstractClasses.hpp ./Exclude.hpp ./fSimulation.h \
236 < ./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ./ReadWrite.hpp \
237 < ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp ./Integrator.cpp \
238 < ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp \
239 < ./NPT.cpp ./NPTi.cpp ./ZConstraint.cpp ../libBASS/parse_me.h
236 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./fForceField.h \
237 > ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
238 > ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h \
239 > ./NVT.cpp ./NPTf.cpp ./NPT.cpp ./NPTi.cpp ./NPTxyz.cpp ./ZConstraint.cpp \
240 > ../libBASS/parse_me.h
241   MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
242   ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp \
243   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
244   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
245   ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
246   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
247 < ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h
247 > ./fSimulation.h ./GenericData.hpp ./Thermo.hpp ./randomSPRNG.hpp \
248 > ../libBASS/simError.h
249   MPIobj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
250   ./Molecule.hpp ./SRI.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
251   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
252   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \
253   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
254 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
255 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
254 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
255 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
256   ../libBASS/simError.h
257   MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./SRI.hpp \
258   ./AbstractClasses.hpp ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
259   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
260   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
261   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
262 < ./fortranWrapDefines.hpp ./GenericData.hpp ./randomSPRNG.hpp ./Integrator.hpp \
263 < ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
264 < ../libBASS/simError.h
262 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./randomSPRNG.hpp \
263 > ./Integrator.hpp ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp \
264 > ./ZConsWriter.hpp ../libBASS/simError.h
265   MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
266   ./SimState.hpp ./AbstractClasses.hpp
267   MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
# Line 251 | Line 273 | MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.
273   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
274   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
275   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
276 < ./fortranWrapDefines.hpp ./GenericData.hpp ./fForceField.h ../libBASS/simError.h \
277 < ./fortranWrappers.hpp
276 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./fForceField.h \
277 > ../libBASS/simError.h ./fortranWrappers.hpp
278   MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
279 < MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h
279 > MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
280 > ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
281 > ./Atom.hpp ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
282 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
283 > ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
284 > ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
285 > ../libBASS/BASS_interface.h ./fSimulation.h ./GenericData.hpp ./fForceField.h
286   MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
287   ./Atom.hpp ./SimState.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
288   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
289   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
290   ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
291   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
292 < ./GenericData.hpp ./fForceField.h ./fortranWrappers.hpp
265 < MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
292 > ./fSimulation.h ./GenericData.hpp ./fForceField.h ./fortranWrappers.hpp
293   MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./SRI.hpp \
294   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
295   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
# Line 272 | Line 299 | MPIobj/NPTf$(O) : ./NPTf.cpp ./Atom.hpp ./SimState.hpp
299   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
300   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
301   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
302 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
303 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
302 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
303 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
304   ./ZConsWriter.hpp ../libBASS/simError.h
305   MPIobj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./SRI.hpp ./AbstractClasses.hpp \
306   ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
307   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
308   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
309   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
310 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
311 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
310 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
311 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
312   ./ZConsWriter.hpp ../libBASS/simError.h
313 < MPIobj/NPTxym$(O) : ./NPTxym.cpp ./Atom.hpp ./SimState.hpp ./Molecule.hpp ./SRI.hpp \
314 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
315 < ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
316 < ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \
313 > MPIobj/NPTxyz$(O) : ./NPTxyz.cpp ./Atom.hpp ./SimState.hpp ./SRI.hpp ./AbstractClasses.hpp \
314 > ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
315 > ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
316 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
317   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
318 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
319 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
318 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
319 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
320   ./ZConsWriter.hpp ../libBASS/simError.h
294 – MPIobj/NPTzm$(O) : ./NPTzm.cpp ./Atom.hpp ./SimState.hpp ./Molecule.hpp ./SRI.hpp \
295 – ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
296 – ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
297 – ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \
298 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
299 – ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
300 – ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
301 – ./ZConsWriter.hpp ../libBASS/simError.h
321   MPIobj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./SRI.hpp ./AbstractClasses.hpp \
322   ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
323   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
324   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
325   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
326 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
327 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
326 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
327 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
328   ./ZConsWriter.hpp ../libBASS/simError.h
329   MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
330   MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
# Line 313 | Line 332 | MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrato
332   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
333   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SimInfo.hpp \
334   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
335 < ./fortranWrapDefines.hpp ./GenericData.hpp ./ForceFields.hpp ./fForceField.h \
336 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
335 > ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
336 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
337   ../libBASS/simError.h
338   MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
339   ../libBASS/simError.h
340 + MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
341   MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp

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