--- trunk/OOPSE/libmdtools/Make.dep	2003/11/06 22:01:37	855
+++ trunk/OOPSE/libmdtools/Make.dep	2004/01/13 22:34:55	940
@@ -120,19 +120,10 @@ obj/mpiSimulation$(O) : ./mpiSimulation.cpp
  ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
  ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
  ./fSimulation.h ./GenericData.hpp ./fForceField.h ./fortranWrappers.hpp
-obj/mpiSimulation$(O) : ./mpiSimulation.cpp
 obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./SRI.hpp \
  ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
  ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
  ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/simError.h
-obj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./SRI.hpp ./AbstractClasses.hpp \
- ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
- ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
- ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
- ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
- ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
- ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
- ./ZConsWriter.hpp ../libBASS/simError.h
 obj/NPTf$(O) : ./NPTf.cpp ./Atom.hpp ./SimState.hpp ./SRI.hpp ./AbstractClasses.hpp \
  ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
  ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
@@ -176,6 +167,7 @@ obj/GenericData$(O) : ./GenericData.cpp ./GenericData.
  ../libBASS/simError.h
 obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
  ../libBASS/simError.h
+obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
 obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
 MPIobj/mpiForceField$(O) : ./mpiForceField.c
 MPIobj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h
@@ -298,19 +290,10 @@ MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
  ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/MakeStamps.hpp \
  ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
  ./fSimulation.h ./GenericData.hpp ./fForceField.h ./fortranWrappers.hpp
-MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
 MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./SRI.hpp \
  ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
  ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
  ../libBASS/TorsionStamp.hpp ./Exclude.hpp ../libBASS/simError.h
-MPIobj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./SRI.hpp ./AbstractClasses.hpp \
- ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
- ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
- ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
- ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
- ./fortranWrapDefines.hpp ./fSimulation.h ./GenericData.hpp ./ForceFields.hpp \
- ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
- ./ZConsWriter.hpp ../libBASS/simError.h
 MPIobj/NPTf$(O) : ./NPTf.cpp ./Atom.hpp ./SimState.hpp ./SRI.hpp ./AbstractClasses.hpp \
  ./SimInfo.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
  ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
@@ -354,4 +337,5 @@ MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericDa
  ../libBASS/simError.h
 MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
  ../libBASS/simError.h
+MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
 MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp