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root/group/trunk/OOPSE/libmdtools/Make.dep
Revision: 1254
Committed: Wed Jun 9 16:16:33 2004 UTC (20 years, 1 month ago) by tim
File size: 69236 byte(s)
Log Message: 
1. adding some useful math classes(Mat3x3d, Vector3d, Quaternion, Euler3)
 these classes use anonymous union and struct to support
 double[3], double[3][3] and double[4]
2. adding roll constraint algorithm

File Contents

# Content
1 # DO NOT DELETE THIS LINE - used by make depend
2 obj/mpiForceField$(O) : ./mpiForceField.c
3 obj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
4 obj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
5 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
6 obj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
7 ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
8 ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
9 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
10 obj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
11 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
12 obj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
13 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
14 ./AbstractClasses.hpp ../libBASS/simError.h
15 obj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
16 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
17 obj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
18 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
19 ./AbstractClasses.hpp
20 obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
21 ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
22 ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
23 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
24 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
25 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
26 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
27 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
28 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
29 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
30 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
31 ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
32 obj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
33 ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
34 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
35 ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
36 obj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
37 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
38 ../libBASS/simError.h ./MatVec3.h
39 obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
40 ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
41 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
42 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
43 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
44 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
45 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
46 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
47 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
48 ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
49 ./fortranWrappers.hpp
50 obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
51 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
52 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
53 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
54 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
55 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
56 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
57 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
58 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
59 ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
60 ../libBASS/simError.h
61 obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
62 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
63 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
64 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
65 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
66 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
67 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
68 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
69 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
70 ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
71 ../libBASS/simError.h
72 obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
73 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
74 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
75 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
76 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
77 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
78 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
79 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
80 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
81 ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
82 ./fortranWrappers.hpp
83 obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
84 obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
85 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
86 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
87 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
88 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
89 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
90 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
91 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
92 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
93 ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
94 obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
95 ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
96 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
97 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
98 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
99 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
100 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
101 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
102 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
103 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h ./fForceField.h
104 obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
105 obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
106 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
107 ./DirectionalAtom.hpp ./AbstractClasses.hpp
108 obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
109 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
110 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
111 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
112 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
113 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
114 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
115 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
116 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
117 ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
118 ../libBASS/simError.h
119 obj/Integrator$(O) : ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
120 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
121 ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
122 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
123 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
124 ./SimState.hpp ./BaseVisitor.hpp ./Integrator.hpp ./Molecule.hpp ./SRI.hpp \
125 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
126 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
127 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
128 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
129 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
130 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
131 ./ZConsWriter.hpp ../libBASS/simError.h
132 obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
133 ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
134 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
135 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
136 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
137 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
138 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
139 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
140 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
141 ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
142 ./fortranWrappers.hpp
143 obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
144 obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
145 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
146 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
147 ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
148 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
149 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
150 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
151 ../libBASS/simError.h
152 obj/mpiSimulation$(O) : ./mpiSimulation.cpp
153 obj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
154 ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
155 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
156 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
157 ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
158 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
159 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
160 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
161 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
162 ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
163 ./ZConsWriter.hpp ../libBASS/simError.h
164 obj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
165 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
166 ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
167 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
168 ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
169 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
170 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
171 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
172 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
173 ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
174 ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
175 ./ZConsWriter.hpp ../libBASS/simError.h
176 obj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
177 ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
178 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
179 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
180 ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
181 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
182 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
183 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
184 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
185 ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
186 ./ZConsWriter.hpp ../libBASS/simError.h
187 obj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
188 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
189 ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
190 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
191 ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
192 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
193 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
194 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
195 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
196 ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
197 ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
198 ./ZConsWriter.hpp ../libBASS/simError.h
199 obj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
200 ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
201 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
202 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
203 ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
204 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
205 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
206 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
207 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
208 ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
209 ./ZConsWriter.hpp ../libBASS/simError.h
210 obj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
211 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
212 ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
213 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
214 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
215 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
216 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
217 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
218 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
219 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
220 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
221 ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./ShakeMin.hpp \
222 ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
223 ./ConstraintIterator.hpp
224 obj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
225 ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
226 ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
227 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
228 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
229 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
230 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
231 ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
232 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
233 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
234 obj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
235 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
236 ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
237 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
238 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
239 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
240 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
241 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
242 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
243 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
244 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
245 ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
246 obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
247 obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
248 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
249 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
250 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
251 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
252 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
253 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
254 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
255 ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
256 ./fSimulation.h ../libBASS/simError.h
257 obj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
258 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
259 ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
260 ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
261 obj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
262 ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
263 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
264 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
265 obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
266 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
267 ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
268 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
269 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
270 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
271 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
272 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
273 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
274 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
275 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
276 ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
277 obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
278 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
279 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
280 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
281 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
282 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
283 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
284 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
285 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
286 ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
287 ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h \
288 ./ConstraintManager.hpp ./ConstraintIterator.hpp
289 obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
290 ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
291 ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
292 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
293 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
294 ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
295 ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
296 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
297 ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
298 ./AbstractClasses.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
299 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ./Restraints.hpp \
300 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
301 ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
302 ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
303 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp ./Integrator.hpp \
304 ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ../libBASS/simError.h \
305 ./NPTf.cpp ./MatVec3.h ../libBASS/simError.h ./NPT.cpp ../libBASS/simError.h \
306 ./NPTi.cpp ../libBASS/simError.h ./NPTxyz.cpp ../libBASS/simError.h \
307 ./ZConstraint.cpp ../libBASS/simError.h ../libBASS/parse_me.h \
308 ../libBASS/simError.h ./OOPSEMinimizer.hpp ./MinimizerParameterSet.hpp \
309 ./ConstraintManager.hpp
310 obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
311 obj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
312 obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
313 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
314 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
315 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
316 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
317 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
318 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
319 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
320 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
321 ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
322 ../libBASS/simError.h
323 obj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
324 obj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
325 ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
326 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
327 ../libBASS/AtomStamp.hpp ../libBASS/simError.h
328 obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
329 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
330 ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
331 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
332 ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
333 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
334 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
335 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
336 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
337 ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
338 ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
339 ../libBASS/simError.h ./MatVec3.h
340 obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
341 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
342 obj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
343 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
344 ./AbstractClasses.hpp
345 obj/Utility$(O) : ./Utility.cpp ./Utility.hpp
346 obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
347 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
348 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
349 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
350 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
351 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
352 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
353 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
354 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
355 ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
356 ./fortranWrappers.hpp
357 obj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
358 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
359 ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
360 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
361 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
362 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
363 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
364 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
365 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
366 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
367 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
368 ./ZConsWriter.hpp ../libBASS/simError.h
369 obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
370 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
371 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
372 ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
373 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
374 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
375 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp \
376 ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
377 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
378 ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
379 ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
380 ../libBASS/simError.h
381 obj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
382 ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
383 ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
384 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
385 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
386 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
387 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
388 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
389 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
390 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
391 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
392 ./ZConsWriter.hpp
393 obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
394 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
395 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
396 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
397 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
398 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
399 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
400 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
401 ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
402 ./fSimulation.h ../libBASS/simError.h
403 obj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
404 ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
405 ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
406 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
407 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
408 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
409 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
410 ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
411 ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
412 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
413 ./fortranWrapDefines.hpp ./fSimulation.h
414 obj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
415 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
416 ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
417 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
418 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
419 ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
420 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
421 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
422 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
423 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
424 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
425 ../libBASS/simError.h
426 obj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
427 ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
428 ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
429 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
430 ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
431 ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
432 ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
433 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
434 ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
435 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
436 ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
437 obj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
438 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
439 ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
440 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
441 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
442 ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
443 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
444 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
445 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
446 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
447 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
448 obj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
449 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
450 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
451 ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
452 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
453 ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
454 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
455 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
456 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
457 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
458 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
459 obj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
460 ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
461 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
462 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
463 ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
464 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
465 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
466 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
467 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
468 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
469 obj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
470 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
471 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
472 ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
473 obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
474 ../libBASS/simError.h
475 obj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
476 obj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
477 ./Quaternion.hpp
478 obj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
479 ./Euler3.hpp
480 obj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
481 obj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
482 ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
483 ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
484 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
485 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
486 ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
487 ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
488 ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
489 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
490 ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
491 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
492 ./fortranWrapDefines.hpp ./fSimulation.h
493 MPIobj/mpiForceField$(O) : ./mpiForceField.c
494 MPIobj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
495 MPIobj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
496 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
497 MPIobj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
498 ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
499 ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
500 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
501 MPIobj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
502 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
503 MPIobj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
504 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
505 ./AbstractClasses.hpp ../libBASS/simError.h
506 MPIobj/Bond$(O) : ./Bond.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
507 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
508 MPIobj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
509 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
510 ./AbstractClasses.hpp
511 MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
512 ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
513 ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
514 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
515 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
516 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
517 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
518 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
519 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
520 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
521 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
522 ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
523 MPIobj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
524 ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
525 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
526 ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
527 MPIobj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
528 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
529 ../libBASS/simError.h ./MatVec3.h
530 MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
531 ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
532 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
533 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
534 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
535 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
536 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
537 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
538 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
539 ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
540 ./fortranWrappers.hpp
541 MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
542 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
543 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
544 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
545 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
546 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
547 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
548 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
549 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
550 ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
551 ../libBASS/simError.h
552 MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
553 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
554 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
555 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
556 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
557 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
558 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
559 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
560 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
561 ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
562 ../libBASS/simError.h
563 MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
564 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
565 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
566 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
567 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
568 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
569 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
570 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
571 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
572 ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
573 ./fortranWrappers.hpp
574 MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
575 MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
576 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
577 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
578 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
579 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
580 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
581 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
582 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
583 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
584 ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
585 MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
586 ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
587 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
588 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
589 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
590 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
591 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
592 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
593 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
594 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h ./fForceField.h
595 MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
596 MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
597 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
598 ./DirectionalAtom.hpp ./AbstractClasses.hpp
599 MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
600 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
601 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
602 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
603 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
604 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
605 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
606 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
607 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
608 ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
609 ../libBASS/simError.h
610 MPIobj/Integrator$(O) : ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
611 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
612 ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
613 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
614 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
615 ./SimState.hpp ./BaseVisitor.hpp ./Integrator.hpp ./Molecule.hpp ./SRI.hpp \
616 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
617 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
618 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
619 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
620 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
621 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
622 ./ZConsWriter.hpp ../libBASS/simError.h
623 MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
624 ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
625 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
626 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
627 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
628 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
629 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
630 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
631 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
632 ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
633 ./fortranWrappers.hpp
634 MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
635 MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
636 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
637 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
638 ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
639 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
640 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
641 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
642 ../libBASS/simError.h
643 MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
644 MPIobj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
645 ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
646 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
647 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
648 ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
649 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
650 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
651 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
652 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
653 ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
654 ./ZConsWriter.hpp ../libBASS/simError.h
655 MPIobj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
656 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
657 ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
658 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
659 ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
660 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
661 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
662 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
663 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
664 ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
665 ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
666 ./ZConsWriter.hpp ../libBASS/simError.h
667 MPIobj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
668 ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
669 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
670 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
671 ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
672 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
673 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
674 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
675 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
676 ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
677 ./ZConsWriter.hpp ../libBASS/simError.h
678 MPIobj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
679 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
680 ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
681 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
682 ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
683 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
684 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
685 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
686 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
687 ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
688 ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
689 ./ZConsWriter.hpp ../libBASS/simError.h
690 MPIobj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
691 ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
692 ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
693 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
694 ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
695 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
696 ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
697 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
698 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
699 ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
700 ./ZConsWriter.hpp ../libBASS/simError.h
701 MPIobj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
702 ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
703 ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
704 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
705 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
706 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
707 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
708 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
709 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
710 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
711 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
712 ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./ShakeMin.hpp \
713 ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
714 ./ConstraintIterator.hpp
715 MPIobj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
716 ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
717 ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
718 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
719 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
720 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
721 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
722 ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
723 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
724 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
725 MPIobj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
726 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
727 ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
728 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
729 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
730 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
731 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
732 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
733 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
734 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
735 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
736 ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
737 MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
738 MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
739 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
740 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
741 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
742 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
743 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
744 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
745 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
746 ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
747 ./fSimulation.h ../libBASS/simError.h
748 MPIobj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
749 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
750 ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
751 ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
752 MPIobj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
753 ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
754 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
755 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
756 MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
757 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
758 ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
759 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
760 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
761 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
762 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
763 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
764 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
765 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
766 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
767 ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
768 MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
769 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
770 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
771 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
772 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
773 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
774 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
775 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
776 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
777 ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
778 ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h \
779 ./ConstraintManager.hpp ./ConstraintIterator.hpp
780 MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
781 ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
782 ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
783 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
784 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
785 ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
786 ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
787 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
788 ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
789 ./AbstractClasses.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
790 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ./Restraints.hpp \
791 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
792 ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
793 ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
794 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp ./Integrator.hpp \
795 ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ../libBASS/simError.h \
796 ./NPTf.cpp ./MatVec3.h ../libBASS/simError.h ./NPT.cpp ../libBASS/simError.h \
797 ./NPTi.cpp ../libBASS/simError.h ./NPTxyz.cpp ../libBASS/simError.h \
798 ./ZConstraint.cpp ../libBASS/simError.h ../libBASS/parse_me.h \
799 ../libBASS/simError.h ./OOPSEMinimizer.hpp ./MinimizerParameterSet.hpp \
800 ./ConstraintManager.hpp
801 MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
802 MPIobj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
803 MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
804 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
805 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
806 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
807 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
808 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
809 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
810 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
811 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
812 ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
813 ../libBASS/simError.h
814 MPIobj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
815 MPIobj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
816 ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
817 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
818 ../libBASS/AtomStamp.hpp ../libBASS/simError.h
819 MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
820 ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
821 ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
822 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
823 ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
824 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
825 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
826 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
827 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
828 ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
829 ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
830 ../libBASS/simError.h ./MatVec3.h
831 MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
832 ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
833 MPIobj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
834 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
835 ./AbstractClasses.hpp
836 MPIobj/Utility$(O) : ./Utility.cpp ./Utility.hpp
837 MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
838 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
839 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
840 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
841 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
842 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
843 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
844 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
845 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
846 ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
847 ./fortranWrappers.hpp
848 MPIobj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
849 ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
850 ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
851 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
852 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
853 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
854 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
855 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
856 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
857 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
858 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
859 ./ZConsWriter.hpp ../libBASS/simError.h
860 MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
861 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
862 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
863 ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
864 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
865 ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
866 ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp \
867 ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
868 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
869 ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
870 ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
871 ../libBASS/simError.h
872 MPIobj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
873 ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
874 ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
875 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
876 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
877 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
878 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
879 ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
880 ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
881 ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
882 ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
883 ./ZConsWriter.hpp
884 MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
885 ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
886 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
887 ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
888 ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
889 ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
890 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
891 ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
892 ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
893 ./fSimulation.h ../libBASS/simError.h
894 MPIobj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
895 ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
896 ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
897 ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
898 ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
899 ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
900 ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
901 ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
902 ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
903 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
904 ./fortranWrapDefines.hpp ./fSimulation.h
905 MPIobj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
906 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
907 ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
908 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
909 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
910 ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
911 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
912 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
913 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
914 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
915 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
916 ../libBASS/simError.h
917 MPIobj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
918 ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
919 ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
920 ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
921 ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
922 ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
923 ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
924 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
925 ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
926 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
927 ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
928 MPIobj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
929 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
930 ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
931 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
932 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
933 ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
934 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
935 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
936 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
937 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
938 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
939 MPIobj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
940 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
941 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
942 ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
943 ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
944 ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
945 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
946 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
947 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
948 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
949 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
950 MPIobj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
951 ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
952 ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
953 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
954 ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
955 ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
956 ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
957 ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
958 ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
959 ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
960 MPIobj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
961 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
962 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
963 ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
964 MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
965 ../libBASS/simError.h
966 MPIobj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
967 MPIobj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
968 ./Quaternion.hpp
969 MPIobj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
970 ./Euler3.hpp
971 MPIobj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
972 MPIobj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
973 ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
974 ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
975 ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
976 ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
977 ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
978 ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
979 ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
980 ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
981 ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
982 ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
983 ./fortranWrapDefines.hpp ./fSimulation.h