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root/group/trunk/OOPSE/libmdtools/Make.dep
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Comparing trunk/OOPSE/libmdtools/Make.dep (file contents):
Revision 1119 by tim, Mon Apr 19 17:44:48 2004 UTC vs.
Revision 1158 by tim, Tue May 11 21:14:26 2004 UTC

# Line 22 | Line 22 | obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp
22   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
23   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
24   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
25 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
26 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
27 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
28 < ./randomSPRNG.hpp ../libBASS/simError.h
25 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
26 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
27 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
28 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
29 > ../libBASS/simError.h
30   obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
31   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
32   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
33   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
34   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
35 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
36 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
37 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
38 < ./randomSPRNG.hpp ../libBASS/simError.h
35 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
36 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
37 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
38 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
39 > ../libBASS/simError.h
40   obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
41   obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
42   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 42 | Line 44 | obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp
44   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
45   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
46   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
47 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
48 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
49 < ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h
47 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
48 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
49 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
50 > ../libBASS/simError.h
51   obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
52   ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
53   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
54   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
55   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
56 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
57 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
58 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
59 < ../libBASS/simError.h ./fortranWrappers.hpp
56 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
57 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
58 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
59 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
60 > ./fortranWrappers.hpp
61   obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
62   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
63   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
64   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
65   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
66 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
67 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
68 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
69 < ../libBASS/simError.h ./fortranWrappers.hpp
66 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
67 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
68 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
69 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
70 > ./fortranWrappers.hpp
71   obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
72   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
73   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
74   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
75   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
76 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
77 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
78 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
79 < ../libBASS/simError.h ./fortranWrappers.hpp
76 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
77 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
78 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
79 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
80 > ./fortranWrappers.hpp
81   obj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
82   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
83   ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
# Line 81 | Line 87 | obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.h
87   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
88   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
89   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
90 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
91 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
92 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
93 < ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
94 < ./MatVec3.h
90 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
91 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
92 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
93 > ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
94 > ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h
95   obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
96   ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
97   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
98   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
99 < ../libBASS/RigidBodyStamp.hpp ../libBASS/Globals.hpp ../libBASS/Component.hpp \
100 < ../libBASS/LinkedCommand.hpp ../libBASS/ZconStamp.hpp ./ForceFields.hpp \
101 < ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
102 < ./SimInfo.hpp ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
103 < ./AbstractClasses.hpp ./Exclude.hpp ./SkipList.hpp ./fSimulation.h \
104 < ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./ReadWrite.hpp \
105 < ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp ./Integrator.cpp \
106 < ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp \
107 < ./MatVec3.h ./NPT.cpp ./NPTi.cpp ./NPTxyz.cpp ./ZConstraint.cpp \
108 < ../libBASS/parse_me.h ./OOPSEMinimizer.hpp ./MinimizerParameterSet.hpp
99 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
100 > ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
101 > ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
102 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
103 > ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
104 > ./AbstractClasses.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
105 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
106 > ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
107 > ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h \
108 > ./NVT.cpp ./NPTf.cpp ./MatVec3.h ./NPT.cpp ./NPTi.cpp ./NPTxyz.cpp \
109 > ./ZConstraint.cpp ../libBASS/parse_me.h ./OOPSEMinimizer.hpp \
110 > ./MinimizerParameterSet.hpp
111   obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
112   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
113   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
114   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
115   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
116 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
117 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
118 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
119 < ./randomSPRNG.hpp ../libBASS/simError.h
116 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
117 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
118 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
119 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
120 > ../libBASS/simError.h
121   obj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
122   ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
123   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 118 | Line 127 | obj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp
127   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
128   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
129   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
130 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ./SimInfo.hpp ./Exclude.hpp \
131 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
132 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
133 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
130 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
131 > ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
132 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
133 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
134 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
135   ../libBASS/simError.h
136   obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
137   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 129 | Line 139 | obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp
139   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
140   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
141   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
142 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
143 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
144 < ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp ./ForceFields.hpp \
145 < ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h
142 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
143 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
144 > ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
145 > ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
146 > ../libBASS/simError.h ./MatVec3.h
147   obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
148   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
149   ./DirectionalAtom.hpp ./AbstractClasses.hpp
# Line 146 | Line 157 | obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp
157   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
158   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
159   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
160 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
161 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
162 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
163 < ../libBASS/simError.h ./fortranWrappers.hpp
160 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
161 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
162 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
163 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
164 > ./fortranWrappers.hpp
165   obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
166   obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
167   ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
# Line 158 | Line 170 | obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./conf
170   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
171   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
172   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
173 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
174 < ../libBASS/BASS_interface.h ./fSimulation.h ./fForceField.h
173 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
174 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
175 > ./fForceField.h
176   obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
177   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
178   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
179   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
180   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
181   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
182 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
183 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
184 < ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
182 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
183 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
184 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
185   obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
186   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
187   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
188   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
189   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
190 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ../libBASS/simError.h
190 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
191 > ./CutoffGroup.hpp ../libBASS/simError.h
192   obj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
193   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
194   ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
195   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
196   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
197   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
198 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
199 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
200 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
201 < ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
198 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
199 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
200 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
201 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
202 > ./ZConsWriter.hpp ../libBASS/simError.h
203   obj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
204   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
205   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
206   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
207   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
208 < ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SkipList.hpp \
209 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
210 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
211 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
212 < ./ZConsWriter.hpp ../libBASS/simError.h
208 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
209 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
210 > ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
211 > ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
212 > ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
213   obj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
214   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
215   ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
216   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
217   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
218   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
219 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
220 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
221 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
222 < ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
219 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
220 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
221 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
222 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
223 > ./ZConsWriter.hpp ../libBASS/simError.h
224   obj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
225   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
226   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
227   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
228   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
229 < ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SkipList.hpp \
230 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
231 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
232 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
233 < ./ZConsWriter.hpp ../libBASS/simError.h
229 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
230 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
231 > ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
232 > ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
233 > ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
234   obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
235   obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
236   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
237   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
238   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
239   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
240 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ./SimInfo.hpp ./Exclude.hpp \
241 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
242 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
243 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
240 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
241 > ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
242 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
243 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
244 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
245   ../libBASS/simError.h
246   obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
247   ../libBASS/simError.h
# Line 237 | Line 254 | obj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEM
254   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
255   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
256   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
257 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
258 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
257 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
258 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
259 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
260   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
261   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
262   ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp
# Line 247 | Line 265 | obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./
265   ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
266   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
267   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
268 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
269 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
268 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
269 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
270 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
271   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
272   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
273   ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
# Line 257 | Line 276 | obj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integ
276   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
277   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
278   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
279 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
280 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
279 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
280 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
281 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
282   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
283   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
284   ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
# Line 267 | Line 287 | obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimiz
287   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
288   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
289   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
290 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
291 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
290 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
291 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
292 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
293   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
294   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
295   ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
# Line 277 | Line 298 | obj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.
298   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
299   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
300   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
301 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
302 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
301 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
302 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
303 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
304   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
305   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
306   ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h
307   obj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
308   ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
309 < ./SimState.hpp ./MatVec3.h
309 > ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
310 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
311   obj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
312 < ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp
312 > ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
313 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
314 > ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
315   obj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
316   ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
317   ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
318   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
319   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
320 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./SimInfo.hpp ./Exclude.hpp \
320 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
321 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
322   ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
323   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
324   obj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
# Line 304 | Line 330 | obj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisit
330   ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
331   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
332   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
333 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
334 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
333 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
334 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
335 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
336   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
337   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
338   ./ReadWrite.hpp ./ZConsWriter.hpp
# Line 332 | Line 359 | MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.h
359   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
360   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
361   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
362 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
363 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
364 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
365 < ./randomSPRNG.hpp ../libBASS/simError.h
362 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
363 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
364 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
365 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
366 > ../libBASS/simError.h
367   MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
368   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
369   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
370   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
371   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
372 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
373 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
374 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
375 < ./randomSPRNG.hpp ../libBASS/simError.h
372 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
373 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
374 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
375 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
376 > ../libBASS/simError.h
377   MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
378   MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
379   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 352 | Line 381 | MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.c
381   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
382   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
383   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
384 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
385 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
386 < ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h
384 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
385 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
386 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
387 > ../libBASS/simError.h
388   MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
389   ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
390   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
391   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
392   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
393 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
394 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
395 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
396 < ../libBASS/simError.h ./fortranWrappers.hpp
393 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
394 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
395 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
396 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
397 > ./fortranWrappers.hpp
398   MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
399   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
400   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
401   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
402   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
403 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
404 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
405 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
406 < ../libBASS/simError.h ./fortranWrappers.hpp
403 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
404 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
405 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
406 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
407 > ./fortranWrappers.hpp
408   MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
409   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
410   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
411   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
412   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
413 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
414 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
415 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
416 < ../libBASS/simError.h ./fortranWrappers.hpp
413 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
414 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
415 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
416 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
417 > ./fortranWrappers.hpp
418   MPIobj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
419   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
420   ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
# Line 391 | Line 424 | MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Ato
424   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
425   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
426   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
427 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
428 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
429 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
430 < ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
431 < ./MatVec3.h
427 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
428 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
429 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
430 > ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
431 > ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h
432   MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
433   ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
434   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
435   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
436 < ../libBASS/RigidBodyStamp.hpp ../libBASS/Globals.hpp ../libBASS/Component.hpp \
437 < ../libBASS/LinkedCommand.hpp ../libBASS/ZconStamp.hpp ./ForceFields.hpp \
438 < ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
439 < ./SimInfo.hpp ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
440 < ./AbstractClasses.hpp ./Exclude.hpp ./SkipList.hpp ./fSimulation.h \
441 < ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./ReadWrite.hpp \
442 < ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp ./Integrator.cpp \
443 < ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp \
444 < ./MatVec3.h ./NPT.cpp ./NPTi.cpp ./NPTxyz.cpp ./ZConstraint.cpp \
445 < ../libBASS/parse_me.h ./OOPSEMinimizer.hpp ./MinimizerParameterSet.hpp
436 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
437 > ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
438 > ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
439 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
440 > ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
441 > ./AbstractClasses.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
442 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
443 > ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
444 > ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h \
445 > ./NVT.cpp ./NPTf.cpp ./MatVec3.h ./NPT.cpp ./NPTi.cpp ./NPTxyz.cpp \
446 > ./ZConstraint.cpp ../libBASS/parse_me.h ./OOPSEMinimizer.hpp \
447 > ./MinimizerParameterSet.hpp
448   MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
449   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
450   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
451   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
452   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
453 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
454 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
455 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
456 < ./randomSPRNG.hpp ../libBASS/simError.h
453 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
454 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
455 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
456 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
457 > ../libBASS/simError.h
458   MPIobj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
459   ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
460   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 428 | Line 464 | MPIobj/Integrator$(O) : ./Integrator.cpp ./Integrator.
464   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
465   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
466   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
467 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ./SimInfo.hpp ./Exclude.hpp \
468 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
469 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
470 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
467 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
468 > ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
469 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
470 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
471 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
472   ../libBASS/simError.h
473   MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
474   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 439 | Line 476 | MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.h
476   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
477   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
478   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
479 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
480 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
481 < ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp ./ForceFields.hpp \
482 < ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h
479 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
480 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
481 > ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
482 > ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
483 > ../libBASS/simError.h ./MatVec3.h
484   MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
485   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
486   ./DirectionalAtom.hpp ./AbstractClasses.hpp
# Line 456 | Line 494 | MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.
494   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
495   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
496   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
497 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
498 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
499 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
500 < ../libBASS/simError.h ./fortranWrappers.hpp
497 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
498 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
499 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
500 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
501 > ./fortranWrappers.hpp
502   MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
503   MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
504   ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
# Line 468 | Line 507 | MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./c
507   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
508   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
509   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
510 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
511 < ../libBASS/BASS_interface.h ./fSimulation.h ./fForceField.h
510 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
511 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
512 > ./fForceField.h
513   MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
514   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
515   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
516   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
517   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
518   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
519 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
520 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
521 < ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
519 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
520 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
521 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
522   MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
523   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
524   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
525   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
526   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
527 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ../libBASS/simError.h
527 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
528 > ./CutoffGroup.hpp ../libBASS/simError.h
529   MPIobj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
530   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
531   ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
532   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
533   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
534   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
535 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
536 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
537 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
538 < ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
535 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
536 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
537 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
538 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
539 > ./ZConsWriter.hpp ../libBASS/simError.h
540   MPIobj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
541   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
542   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
543   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
544   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
545 < ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SkipList.hpp \
546 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
547 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
548 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
549 < ./ZConsWriter.hpp ../libBASS/simError.h
545 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
546 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
547 > ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
548 > ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
549 > ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
550   MPIobj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
551   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
552   ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
553   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
554   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
555   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
556 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
557 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
558 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
559 < ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
556 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
557 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
558 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
559 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
560 > ./ZConsWriter.hpp ../libBASS/simError.h
561   MPIobj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
562   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
563   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
564   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
565   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
566 < ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SkipList.hpp \
567 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
568 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
569 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
570 < ./ZConsWriter.hpp ../libBASS/simError.h
566 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
567 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
568 > ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
569 > ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
570 > ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
571   MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
572   MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
573   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
574   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
575   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
576   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
577 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ./SimInfo.hpp ./Exclude.hpp \
578 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
579 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
580 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
577 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
578 > ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
579 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
580 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
581 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
582   ../libBASS/simError.h
583   MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
584   ../libBASS/simError.h
# Line 547 | Line 591 | MPIobj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOP
591   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
592   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
593   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
594 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
595 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
594 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
595 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
596 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
597   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
598   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
599   ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp
# Line 557 | Line 602 | MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp
602   ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
603   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
604   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
605 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
606 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
605 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
606 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
607 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
608   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
609   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
610   ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
# Line 567 | Line 613 | MPIobj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./In
613   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
614   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
615   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
616 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
617 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
616 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
617 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
618 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
619   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
620   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
621   ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
# Line 577 | Line 624 | MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMini
624   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
625   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
626   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
627 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
628 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
627 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
628 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
629 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
630   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
631   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
632   ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
# Line 587 | Line 635 | MPIobj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsRead
635   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
636   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
637   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
638 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
639 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
638 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
639 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
640 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
641   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
642   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
643   ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h
644   MPIobj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
645   ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
646 < ./SimState.hpp ./MatVec3.h
646 > ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
647 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
648   MPIobj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
649 < ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp
649 > ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
650 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
651 > ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
652   MPIobj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
653   ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
654   ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
655   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
656   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
657 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./SimInfo.hpp ./Exclude.hpp \
657 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
658 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
659   ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
660   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
661   MPIobj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
# Line 614 | Line 667 | MPIobj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVi
667   ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
668   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
669   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
670 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
671 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
670 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
671 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
672 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
673   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
674   ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
675   ./ReadWrite.hpp ./ZConsWriter.hpp

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