ViewVC Help
View File | Revision Log | Show Annotations | View Changeset | Root Listing
root/group/trunk/OOPSE/libmdtools/Make.dep
(Generate patch)

Comparing trunk/OOPSE/libmdtools/Make.dep (file contents):
Revision 1119 by tim, Mon Apr 19 17:44:48 2004 UTC vs.
Revision 1268 by tim, Fri Jun 11 17:16:21 2004 UTC

# Line 1 | Line 1
1   # DO NOT DELETE THIS LINE - used by make depend
2   obj/mpiForceField$(O) : ./mpiForceField.c
3   obj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
4 – obj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h
4   obj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
5   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
6 + obj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
7 + ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
8 + ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
9 + ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
10   obj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
11   ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
12   obj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
# Line 14 | Line 17 | obj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom
17   obj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
18   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
19   ./AbstractClasses.hpp
20 + obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
21 + ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
22 + ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
23 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
24 + ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
25 + ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
26 + ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
27 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
28 + ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
29 + ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
30 + ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
31 + ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
32 + obj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
33 + ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
34 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
35 + ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
36   obj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
37   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
38   ../libBASS/simError.h ./MatVec3.h
39 < obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
21 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
22 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
23 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
24 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
25 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
26 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
27 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
28 < ./randomSPRNG.hpp ../libBASS/simError.h
29 < obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
30 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
31 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
32 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
33 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
34 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
35 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
36 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
37 < ./randomSPRNG.hpp ../libBASS/simError.h
38 < obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
39 < obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
40 < ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
41 < ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
42 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
43 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
44 < ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
45 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
46 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
47 < ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h
48 < obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
39 > obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
40   ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
41   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
42   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
43   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
44 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
45 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
46 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
47 < ../libBASS/simError.h ./fortranWrappers.hpp
48 < obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
44 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
45 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
46 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
47 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
48 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
49 > ./fortranWrappers.hpp
50 > obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
51   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
52   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
53   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
54   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
55 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
56 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
57 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
58 < ../libBASS/simError.h ./fortranWrappers.hpp
59 < obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
55 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
56 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
57 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
58 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
59 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
60 > ../libBASS/simError.h
61 > obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
62   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
63   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
64   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
65   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
71 – ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
72 – ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
73 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
74 – ../libBASS/simError.h ./fortranWrappers.hpp
75 – obj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
76 – ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
77 – ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
78 – ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
79 – obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
80 – ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
81 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
82 – ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
83 – ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
84 – ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
85 – ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
86 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
87 – ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
88 – ./MatVec3.h
89 – obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
90 – ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
91 – ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
66   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
67 < ../libBASS/RigidBodyStamp.hpp ../libBASS/Globals.hpp ../libBASS/Component.hpp \
68 < ../libBASS/LinkedCommand.hpp ../libBASS/ZconStamp.hpp ./ForceFields.hpp \
69 < ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
70 < ./SimInfo.hpp ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
71 < ./AbstractClasses.hpp ./Exclude.hpp ./SkipList.hpp ./fSimulation.h \
72 < ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./ReadWrite.hpp \
99 < ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp ./Integrator.cpp \
100 < ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp \
101 < ./MatVec3.h ./NPT.cpp ./NPTi.cpp ./NPTxyz.cpp ./ZConstraint.cpp \
102 < ../libBASS/parse_me.h ./OOPSEMinimizer.hpp ./MinimizerParameterSet.hpp
103 < obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
67 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
68 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
69 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
70 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
71 > ../libBASS/simError.h
72 > obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
73   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
74   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
75   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
76   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
108 – ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
109 – ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
110 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
111 – ./randomSPRNG.hpp ../libBASS/simError.h
112 – obj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
113 – ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
114 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
115 – ../libBASS/AtomStamp.hpp ../libBASS/simError.h
116 – obj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
117 – ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
118 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
119 – ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
77   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
78 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ./SimInfo.hpp ./Exclude.hpp \
79 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
80 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
81 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
82 < ../libBASS/simError.h
83 < obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
84 < ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
85 < ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
86 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
87 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
78 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
79 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
80 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
81 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
82 > ./fortranWrappers.hpp
83 > obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
84 > obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
85 > ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
86 > ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
87 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
88 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
89   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
90 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
91 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
92 < ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp ./ForceFields.hpp \
93 < ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h
136 < obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
137 < ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
138 < ./DirectionalAtom.hpp ./AbstractClasses.hpp
139 < obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
140 < ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
141 < obj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
142 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
143 < ./AbstractClasses.hpp
144 < obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
145 < ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
146 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
147 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
148 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
149 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
150 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
151 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
152 < ../libBASS/simError.h ./fortranWrappers.hpp
153 < obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
90 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
91 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
92 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
93 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
94   obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
95   ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
96   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 158 | Line 98 | obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./conf
98   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
99   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
100   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
101 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
102 < ../libBASS/BASS_interface.h ./fSimulation.h ./fForceField.h
103 < obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
104 < ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
101 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
102 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
103 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h ./fForceField.h
104 > obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
105 > obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
106 > ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
107 > ./DirectionalAtom.hpp ./AbstractClasses.hpp
108 > obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
109 > ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
110   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
111   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
112   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
113   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
114 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
115 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
116 < ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
114 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
115 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
116 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
117 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
118 > ../libBASS/simError.h
119 > obj/Integrator$(O) : ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
120 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
121 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
122 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
123 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
124 > ./SimState.hpp ./BaseVisitor.hpp ./Roll.hpp ./Vector3d.hpp ./Integrator.hpp \
125 > ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
126 > ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
127 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
128 > ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
129 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
130 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
131 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
132 > ../libBASS/simError.h
133 > obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
134 > ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
135 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
136 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
137 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
138 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
139 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
140 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
141 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
142 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
143 > ./fortranWrappers.hpp
144 > obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
145   obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
146   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
147   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
148   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
149   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
150 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ../libBASS/simError.h
150 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
151 > ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
152 > ../libBASS/simError.h
153 > obj/mpiSimulation$(O) : ./mpiSimulation.cpp
154 > obj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
155 > ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
156 > ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
157 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
158 > ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
159 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
160 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
161 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
162 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
163 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
164 > ./ZConsWriter.hpp ../libBASS/simError.h
165   obj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
166   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
167   ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
168   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
169   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
170   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
171 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
172 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
173 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
174 < ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
171 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
172 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
173 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
174 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
175 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
176 > ./ZConsWriter.hpp ../libBASS/simError.h
177   obj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
178   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
179   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
180   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
181   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
182 < ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SkipList.hpp \
183 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
184 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
185 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
182 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
183 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
184 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
185 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
186 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
187   ./ZConsWriter.hpp ../libBASS/simError.h
188   obj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
189   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 201 | Line 191 | obj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp .
191   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
192   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
193   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
194 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
195 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
196 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
197 < ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
194 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
195 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
196 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
197 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
198 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
199 > ./ZConsWriter.hpp ../libBASS/simError.h
200   obj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
201   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
202   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
203   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
204   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
205 < ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SkipList.hpp \
206 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
207 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
216 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
217 < ./ZConsWriter.hpp ../libBASS/simError.h
218 < obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
219 < obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
220 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
221 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
222 < ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
223 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
224 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ./SimInfo.hpp ./Exclude.hpp \
225 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
205 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
206 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
207 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
208   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
209 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
210 < ../libBASS/simError.h
229 < obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
230 < ../libBASS/simError.h
231 < obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
232 < obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
233 < obj/mpiSimulation$(O) : ./mpiSimulation.cpp
234 < obj/Utility$(O) : ./Utility.cpp ./Utility.hpp
209 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
210 > ./ZConsWriter.hpp ../libBASS/simError.h
211   obj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
212   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
213   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
214   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
215   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
216 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
217 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
218 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
219 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
220 < ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp
221 < obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
222 < ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
223 < ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
224 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
225 < ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
226 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
227 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
228 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
229 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
230 < ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
216 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
217 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
218 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
219 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
220 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
221 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
222 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./ShakeMin.hpp \
223 > ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
224 > ./ConstraintIterator.hpp
225 > obj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
226 > ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
227 > ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
228 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
229 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
230 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
231 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
232 > ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
233 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
234 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
235   obj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
236   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
237   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
238   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
239   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
240 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
241 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
240 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
241 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
242 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
243 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
244 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
245 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
246 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
247 > obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
248 > obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
249 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
250 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
251 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
252 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
253 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
254 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
255 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
256   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
257 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
258 < ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
257 > ./fSimulation.h ../libBASS/simError.h
258 > obj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
259 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
260 > ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
261 > ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
262 > obj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
263 > ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
264 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
265 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
266   obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
267   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
268   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
269   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
270   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
271 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
272 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
273 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
274 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
275 < ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
271 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
272 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
273 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
274 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
275 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
276 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
277 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
278 > obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
279 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
280 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
281 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
282 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
283 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
284 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
285 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
286 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
287 > ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
288 > ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h \
289 > ./ConstraintManager.hpp ./ConstraintIterator.hpp
290 > obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
291 > ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
292 > ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
293 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
294 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
295 > ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
296 > ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
297 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
298 > ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
299 > ./AbstractClasses.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
300 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ./Restraints.hpp \
301 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
302 > ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
303 > ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
304 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp ./Roll.hpp \
305 > ./Vector3d.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h \
306 > ./NVT.cpp ../libBASS/simError.h ./NPTf.cpp ./MatVec3.h ../libBASS/simError.h \
307 > ./NPT.cpp ../libBASS/simError.h ./NPTi.cpp ../libBASS/simError.h ./NPTxyz.cpp \
308 > ../libBASS/simError.h ./ZConstraint.cpp ../libBASS/simError.h \
309 > ../libBASS/parse_me.h ../libBASS/simError.h ./OOPSEMinimizer.hpp \
310 > ./MinimizerParameterSet.hpp ./ConstraintManager.hpp
311 > obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
312 > obj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
313 > obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
314 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
315 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
316 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
317 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
318 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
319 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
320 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
321 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
322 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
323 > ../libBASS/simError.h
324 > obj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
325 > obj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
326 > ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
327 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
328 > ../libBASS/AtomStamp.hpp ../libBASS/simError.h
329 > obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
330 > ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
331 > ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
332 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
333 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
334 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
335 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
336 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
337 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
338 > ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
339 > ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
340 > ../libBASS/simError.h ./MatVec3.h
341 > obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
342 > ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
343 > obj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
344 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
345 > ./AbstractClasses.hpp
346 > obj/Utility$(O) : ./Utility.cpp ./Utility.hpp
347 > obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
348 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
349 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
350 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
351 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
352 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
353 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
354 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
355 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
356 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
357 > ./fortranWrappers.hpp
358   obj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
359   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
360   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
361   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
362   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
363 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
364 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
365 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
283 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
284 < ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h
285 < obj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
286 < ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
287 < ./SimState.hpp ./MatVec3.h
288 < obj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
289 < ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp
290 < obj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
291 < ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
292 < ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
293 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
294 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
295 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./SimInfo.hpp ./Exclude.hpp \
363 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
364 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
365 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
366   ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
367 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
368 < obj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
369 < ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
370 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
371 < ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
367 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
368 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
369 > ./ZConsWriter.hpp ../libBASS/simError.h
370 > obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
371 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
372 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
373 > ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
374 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
375 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
376 > ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp \
377 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
378 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
379 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
380 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
381 > ../libBASS/simError.h
382   obj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
383   ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
384   ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
385   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
386   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
387 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
388 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
387 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
388 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
389 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
390 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
391 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
392 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
393 > ./ZConsWriter.hpp
394 > obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
395 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
396 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
397 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
398 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
399 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
400 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
401 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
402   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
403 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
404 < ./ReadWrite.hpp ./ZConsWriter.hpp
403 > ./fSimulation.h ../libBASS/simError.h
404 > obj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
405 > ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
406 > ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
407 > ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
408 > ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
409 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
410 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
411 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
412 > ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
413 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
414 > ./fortranWrapDefines.hpp ./fSimulation.h
415 > obj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
416 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
417 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
418 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
419 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
420 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
421 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
422 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
423 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
424 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
425 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
426 > ../libBASS/simError.h
427 > obj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
428 > ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
429 > ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
430 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
431 > ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
432 > ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
433 > ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
434 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
435 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
436 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
437 > ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
438 > obj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
439 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
440 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
441 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
442 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
443 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
444 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
445 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
446 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
447 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
448 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
449 > obj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
450 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
451 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
452 > ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
453 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
454 > ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
455 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
456 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
457 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
458 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
459 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
460 > obj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
461 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
462 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
463 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
464 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
465 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
466 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
467 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
468 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
469 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
470 > obj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
471 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
472 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
473 > ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
474 > obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
475 > ../libBASS/simError.h
476 > obj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
477 > obj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
478 > ./Quaternion.hpp
479 > obj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
480 > ./Euler3.hpp
481 > obj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
482 > obj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
483 > ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
484 > ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
485 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
486 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
487 > ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
488 > ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
489 > ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
490 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
491 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
492 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
493 > ./fortranWrapDefines.hpp ./fSimulation.h
494   MPIobj/mpiForceField$(O) : ./mpiForceField.c
495   MPIobj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
314 – MPIobj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h
496   MPIobj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
497   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
498 + MPIobj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
499 + ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
500 + ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
501 + ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
502   MPIobj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
503   ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
504   MPIobj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
# Line 324 | Line 509 | MPIobj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./A
509   MPIobj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
510   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
511   ./AbstractClasses.hpp
512 + MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
513 + ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
514 + ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
515 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
516 + ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
517 + ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
518 + ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
519 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
520 + ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
521 + ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
522 + ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
523 + ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
524 + MPIobj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
525 + ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
526 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
527 + ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
528   MPIobj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
529   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
530   ../libBASS/simError.h ./MatVec3.h
531 < MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
331 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
332 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
333 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
334 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
335 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
336 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
337 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
338 < ./randomSPRNG.hpp ../libBASS/simError.h
339 < MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
340 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
341 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
342 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
343 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
344 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
345 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
346 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
347 < ./randomSPRNG.hpp ../libBASS/simError.h
348 < MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
349 < MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
350 < ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
351 < ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
352 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
353 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
354 < ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
355 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
356 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
357 < ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp ../libBASS/simError.h
358 < MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
531 > MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
532   ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
533   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
534   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
535   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
536 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
537 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
538 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
539 < ../libBASS/simError.h ./fortranWrappers.hpp
540 < MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
536 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
537 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
538 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
539 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
540 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
541 > ./fortranWrappers.hpp
542 > MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
543   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
544   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
545   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
546   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
547 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
548 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
549 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
550 < ../libBASS/simError.h ./fortranWrappers.hpp
551 < MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
547 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
548 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
549 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
550 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
551 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
552 > ../libBASS/simError.h
553 > MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
554   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
555   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
556   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
557   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
381 – ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
382 – ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
383 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
384 – ../libBASS/simError.h ./fortranWrappers.hpp
385 – MPIobj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
386 – ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
387 – ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
388 – ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
389 – MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
390 – ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
391 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
392 – ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
393 – ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
394 – ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
395 – ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
396 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
397 – ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
398 – ./MatVec3.h
399 – MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
400 – ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
401 – ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
558   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
559 < ../libBASS/RigidBodyStamp.hpp ../libBASS/Globals.hpp ../libBASS/Component.hpp \
560 < ../libBASS/LinkedCommand.hpp ../libBASS/ZconStamp.hpp ./ForceFields.hpp \
561 < ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
562 < ./SimInfo.hpp ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
563 < ./AbstractClasses.hpp ./Exclude.hpp ./SkipList.hpp ./fSimulation.h \
564 < ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./ReadWrite.hpp \
409 < ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp ./Integrator.cpp \
410 < ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp \
411 < ./MatVec3.h ./NPT.cpp ./NPTi.cpp ./NPTxyz.cpp ./ZConstraint.cpp \
412 < ../libBASS/parse_me.h ./OOPSEMinimizer.hpp ./MinimizerParameterSet.hpp
413 < MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
559 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
560 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
561 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
562 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
563 > ../libBASS/simError.h
564 > MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
565   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
566   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
567   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
568   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
418 – ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
419 – ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
420 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
421 – ./randomSPRNG.hpp ../libBASS/simError.h
422 – MPIobj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
423 – ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
424 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
425 – ../libBASS/AtomStamp.hpp ../libBASS/simError.h
426 – MPIobj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
427 – ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
428 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
429 – ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
569   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
570 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ./SimInfo.hpp ./Exclude.hpp \
571 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
572 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
573 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
574 < ../libBASS/simError.h
575 < MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
576 < ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
577 < ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
578 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
579 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
570 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
571 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
572 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
573 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
574 > ./fortranWrappers.hpp
575 > MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
576 > MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
577 > ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
578 > ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
579 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
580 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
581   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
582 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
583 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
584 < ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp ./ForceFields.hpp \
585 < ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h
446 < MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
447 < ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
448 < ./DirectionalAtom.hpp ./AbstractClasses.hpp
449 < MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
450 < ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
451 < MPIobj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
452 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
453 < ./AbstractClasses.hpp
454 < MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
455 < ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
456 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
457 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
458 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
459 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./Exclude.hpp \
460 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
461 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
462 < ../libBASS/simError.h ./fortranWrappers.hpp
463 < MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
582 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
583 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
584 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
585 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
586   MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
587   ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
588   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 468 | Line 590 | MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./c
590   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
591   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
592   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
593 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
594 < ../libBASS/BASS_interface.h ./fSimulation.h ./fForceField.h
595 < MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
596 < ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
593 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
594 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
595 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h ./fForceField.h
596 > MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
597 > MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
598 > ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
599 > ./DirectionalAtom.hpp ./AbstractClasses.hpp
600 > MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
601 > ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
602   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
603   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
604   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
605   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
606 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
607 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
608 < ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
606 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
607 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
608 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
609 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
610 > ../libBASS/simError.h
611 > MPIobj/Integrator$(O) : ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
612 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
613 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
614 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
615 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
616 > ./SimState.hpp ./BaseVisitor.hpp ./Roll.hpp ./Vector3d.hpp ./Integrator.hpp \
617 > ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
618 > ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
619 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
620 > ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
621 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
622 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
623 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
624 > ../libBASS/simError.h
625 > MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
626 > ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
627 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
628 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
629 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
630 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
631 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
632 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
633 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
634 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
635 > ./fortranWrappers.hpp
636 > MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
637   MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
638   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
639   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
640   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
641   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
642 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ../libBASS/simError.h
642 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
643 > ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
644 > ../libBASS/simError.h
645 > MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
646 > MPIobj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
647 > ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
648 > ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
649 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
650 > ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
651 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
652 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
653 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
654 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
655 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
656 > ./ZConsWriter.hpp ../libBASS/simError.h
657   MPIobj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
658   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
659   ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
660   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
661   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
662   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
663 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
664 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
665 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
666 < ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
663 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
664 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
665 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
666 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
667 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
668 > ./ZConsWriter.hpp ../libBASS/simError.h
669   MPIobj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
670   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
671   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
672   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
673   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
674 < ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SkipList.hpp \
675 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
676 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
677 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
674 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
675 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
676 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
677 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
678 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
679   ./ZConsWriter.hpp ../libBASS/simError.h
680   MPIobj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
681   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 511 | Line 683 | MPIobj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hp
683   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
684   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
685   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
686 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
687 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
688 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
689 < ./ReadWrite.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h
686 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
687 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
688 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
689 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
690 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
691 > ./ZConsWriter.hpp ../libBASS/simError.h
692   MPIobj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
693   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
694   ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
695   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
696   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
697 < ../libBASS/TorsionStamp.hpp ./Exclude.hpp ./SkipList.hpp \
698 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
699 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
526 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
527 < ./ZConsWriter.hpp ../libBASS/simError.h
528 < MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
529 < MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
530 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
531 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
532 < ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
533 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
534 < ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp ./SimInfo.hpp ./Exclude.hpp \
535 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
697 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
698 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
699 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
700   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
701 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
702 < ../libBASS/simError.h
539 < MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
540 < ../libBASS/simError.h
541 < MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
542 < MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
543 < MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
544 < MPIobj/Utility$(O) : ./Utility.cpp ./Utility.hpp
701 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
702 > ./ZConsWriter.hpp ../libBASS/simError.h
703   MPIobj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
704   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
705   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
706   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
707   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
708 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
709 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
710 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
711 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
712 < ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp
713 < MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
714 < ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
715 < ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
716 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
717 < ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
718 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
719 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
720 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
721 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
722 < ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
708 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
709 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
710 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
711 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
712 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
713 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
714 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./ShakeMin.hpp \
715 > ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
716 > ./ConstraintIterator.hpp
717 > MPIobj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
718 > ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
719 > ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
720 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
721 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
722 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
723 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
724 > ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
725 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
726 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
727   MPIobj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
728   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
729   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
730   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
731   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
732 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
733 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
732 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
733 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
734 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
735 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
736 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
737 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
738 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
739 > MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
740 > MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
741 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
742 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
743 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
744 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
745 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
746 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
747 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
748   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
749 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
750 < ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
749 > ./fSimulation.h ../libBASS/simError.h
750 > MPIobj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
751 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
752 > ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
753 > ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
754 > MPIobj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
755 > ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
756 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
757 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
758   MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
759   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
760   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
761   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
762   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
763 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
764 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
765 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
766 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
767 < ./ReadWrite.hpp ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
763 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
764 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
765 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
766 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
767 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
768 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
769 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
770 > MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
771 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
772 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
773 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
774 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
775 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
776 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
777 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
778 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
779 > ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
780 > ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h \
781 > ./ConstraintManager.hpp ./ConstraintIterator.hpp
782 > MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
783 > ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
784 > ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
785 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
786 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
787 > ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
788 > ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
789 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
790 > ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
791 > ./AbstractClasses.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
792 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ./Restraints.hpp \
793 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
794 > ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
795 > ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
796 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp ./Roll.hpp \
797 > ./Vector3d.hpp ./Integrator.hpp ./ZConsWriter.hpp ../libBASS/simError.h \
798 > ./NVT.cpp ../libBASS/simError.h ./NPTf.cpp ./MatVec3.h ../libBASS/simError.h \
799 > ./NPT.cpp ../libBASS/simError.h ./NPTi.cpp ../libBASS/simError.h ./NPTxyz.cpp \
800 > ../libBASS/simError.h ./ZConstraint.cpp ../libBASS/simError.h \
801 > ../libBASS/parse_me.h ../libBASS/simError.h ./OOPSEMinimizer.hpp \
802 > ./MinimizerParameterSet.hpp ./ConstraintManager.hpp
803 > MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
804 > MPIobj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
805 > MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
806 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
807 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
808 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
809 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
810 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
811 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
812 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
813 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
814 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
815 > ../libBASS/simError.h
816 > MPIobj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
817 > MPIobj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
818 > ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
819 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
820 > ../libBASS/AtomStamp.hpp ../libBASS/simError.h
821 > MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
822 > ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
823 > ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
824 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
825 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
826 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
827 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
828 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
829 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
830 > ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
831 > ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
832 > ../libBASS/simError.h ./MatVec3.h
833 > MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
834 > ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
835 > MPIobj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
836 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
837 > ./AbstractClasses.hpp
838 > MPIobj/Utility$(O) : ./Utility.cpp ./Utility.hpp
839 > MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
840 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
841 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
842 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
843 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
844 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
845 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
846 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
847 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
848 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
849 > ./fortranWrappers.hpp
850   MPIobj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
851   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
852   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
853   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
854   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
855 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
856 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
857 < ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
593 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
594 < ./ReadWrite.hpp ./ZConsWriter.hpp ../libBASS/simError.h
595 < MPIobj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
596 < ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
597 < ./SimState.hpp ./MatVec3.h
598 < MPIobj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
599 < ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp
600 < MPIobj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
601 < ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
602 < ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
603 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
604 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
605 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp ./SimInfo.hpp ./Exclude.hpp \
855 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
856 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
857 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
858   ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
859 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
860 < MPIobj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
861 < ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
862 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
863 < ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
859 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
860 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
861 > ./ZConsWriter.hpp ../libBASS/simError.h
862 > MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
863 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
864 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
865 > ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
866 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
867 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
868 > ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp \
869 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
870 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
871 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
872 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
873 > ../libBASS/simError.h
874   MPIobj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
875   ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
876   ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
877   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
878   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
879 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp ./RigidBody.hpp \
880 < ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
879 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
880 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
881 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
882 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
883 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
884 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
885 > ./ZConsWriter.hpp
886 > MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
887 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
888 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
889 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
890 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
891 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
892 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
893 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
894   ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
895 < ./fSimulation.h ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp \
896 < ./ReadWrite.hpp ./ZConsWriter.hpp
895 > ./fSimulation.h ../libBASS/simError.h
896 > MPIobj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
897 > ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
898 > ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
899 > ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
900 > ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
901 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
902 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
903 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
904 > ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
905 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
906 > ./fortranWrapDefines.hpp ./fSimulation.h
907 > MPIobj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
908 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
909 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
910 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
911 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
912 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
913 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
914 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
915 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
916 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
917 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
918 > ../libBASS/simError.h
919 > MPIobj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
920 > ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
921 > ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
922 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
923 > ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
924 > ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
925 > ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
926 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
927 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
928 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
929 > ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
930 > MPIobj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
931 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
932 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
933 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
934 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
935 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
936 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
937 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
938 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
939 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
940 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
941 > MPIobj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
942 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
943 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
944 > ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
945 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
946 > ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
947 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
948 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
949 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
950 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
951 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
952 > MPIobj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
953 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
954 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
955 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
956 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
957 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
958 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
959 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
960 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
961 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
962 > MPIobj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
963 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
964 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
965 > ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
966 > MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
967 > ../libBASS/simError.h
968 > MPIobj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
969 > MPIobj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
970 > ./Quaternion.hpp
971 > MPIobj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
972 > ./Euler3.hpp
973 > MPIobj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
974 > MPIobj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
975 > ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
976 > ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
977 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
978 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
979 > ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
980 > ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
981 > ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
982 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
983 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
984 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
985 > ./fortranWrapDefines.hpp ./fSimulation.h

Diff Legend

– Removed lines
+ Added lines
< Changed lines
> Changed lines