--- trunk/OOPSE/libmdtools/Make.dep	2004/06/04 03:15:31	1234
+++ trunk/OOPSE/libmdtools/Make.dep	2004/06/09 16:16:33	1254
@@ -1,7 +1,6 @@
 # DO NOT DELETE THIS LINE - used by make depend
 obj/mpiForceField$(O) : ./mpiForceField.c
 obj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
-obj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h
 obj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
  ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
 obj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
@@ -422,7 +421,8 @@ obj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cp
  ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
  ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
  ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
- ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp
+ ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
+ ../libBASS/simError.h
 obj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
  ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
  ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
@@ -433,7 +433,7 @@ obj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAl
  ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
  ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
  ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
- ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h
+ ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
 obj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
  ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
  ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
@@ -444,13 +444,18 @@ obj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp
  ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
  ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
  ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
- ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
-obj/ShakeMin$(O) : ./ShakeMin.cpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
- ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
- ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
+ ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
+obj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
  ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
  ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
- ./SimState.hpp ./BaseVisitor.hpp
+ ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
+ ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
+ ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
+ ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
+ ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
+ ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
+ ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
+ ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
 obj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
  ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
  ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
@@ -467,9 +472,26 @@ MPIobj/mpiForceField$(O) : ./mpiForceField.c
  ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
 obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
  ../libBASS/simError.h
+obj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
+obj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
+ ./Quaternion.hpp
+obj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
+ ./Euler3.hpp
+obj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
+obj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
+ ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
+ ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
+ ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
+ ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
+ ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
+ ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
+ ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
+ ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
+ ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
+ ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
+ ./fortranWrapDefines.hpp ./fSimulation.h
 MPIobj/mpiForceField$(O) : ./mpiForceField.c
 MPIobj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
-MPIobj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h
 MPIobj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
  ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
 MPIobj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
@@ -890,7 +912,8 @@ MPIobj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm
  ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
  ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
  ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
- ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp
+ ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
+ ../libBASS/simError.h
 MPIobj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
  ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
  ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
@@ -901,7 +924,7 @@ MPIobj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./Constrain
  ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
  ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
  ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
- ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h
+ ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
 MPIobj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
  ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
  ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
@@ -912,13 +935,18 @@ MPIobj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.
  ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
  ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
  ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
- ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
-MPIobj/ShakeMin$(O) : ./ShakeMin.cpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
- ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
- ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
+ ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
+MPIobj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
  ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
  ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
- ./SimState.hpp ./BaseVisitor.hpp
+ ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
+ ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
+ ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
+ ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
+ ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
+ ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
+ ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
+ ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
 MPIobj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
  ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
  ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
@@ -935,3 +963,21 @@ MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWrit
  ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
 MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
  ../libBASS/simError.h
+MPIobj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
+MPIobj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
+ ./Quaternion.hpp
+MPIobj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
+ ./Euler3.hpp
+MPIobj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
+MPIobj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
+ ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
+ ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
+ ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
+ ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
+ ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
+ ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
+ ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
+ ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
+ ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
+ ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
+ ./fortranWrapDefines.hpp ./fSimulation.h