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Comparing trunk/OOPSE/libmdtools/Make.dep (file contents):
Revision 1268 by tim, Fri Jun 11 17:16:21 2004 UTC vs.
Revision 1269 by gezelter, Fri Jun 11 19:24:21 2004 UTC

# Line 17 | Line 17 | obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./
17   obj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
18   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
19   ./AbstractClasses.hpp
20 + obj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
21 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
22 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
23 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
24 + ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
25 + ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
26 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
27 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
28 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
29 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
30   obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
31   ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
32   ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 33 | Line 43 | obj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom
43   ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
44   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
45   ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
46 + obj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
47 + ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
48 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
49 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
50 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
51 + ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
52 + ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
53 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
54 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
55 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
56 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
57 + ../libBASS/simError.h
58 + obj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
59 + ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
60 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
61 + ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
62 + obj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
63 + ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
64 + ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
65 + ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
66 + ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
67 + ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
68 + ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
69 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
70 + ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
71 + ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
72 + ./fortranWrapDefines.hpp ./fSimulation.h
73   obj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
74   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
75   ../libBASS/simError.h ./MatVec3.h
# Line 80 | Line 117 | obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
117   ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
118   ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
119   ./fortranWrappers.hpp
120 + obj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
121   obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
122   obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
123   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 141 | Line 179 | obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libB
179   ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
180   ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
181   ./fortranWrappers.hpp
182 + obj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
183 + ./Euler3.hpp
184   obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
185   obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
186   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
# Line 244 | Line 284 | obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.
284   ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
285   ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
286   ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
287 + obj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
288 + ./Quaternion.hpp
289   obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
290 + obj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
291 + ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
292 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
293 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
294 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
295 + ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
296 + ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
297 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
298 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
299 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
300 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
301   obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
302   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
303   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 263 | Line 316 | obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimiz
316   ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
317   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
318   ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
319 + obj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
320 + ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
321 + ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
322 + ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
323 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
324 + ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
325 + ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
326 + ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
327 + ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
328 + ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
329 + ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
330 + ./fortranWrapDefines.hpp ./fSimulation.h
331   obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
332   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
333   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 275 | Line 340 | obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.h
340   ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
341   ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
342   ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
343 + obj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
344 + ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
345 + ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
346 + ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
347 + ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
348 + ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
349 + ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
350 + ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
351 + ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
352 + ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
353 + ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
354 + obj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
355 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
356 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
357 + ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
358 + ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
359 + ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
360 + ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
361 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
362 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
363 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
364 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
365   obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
366   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
367   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 344 | Line 431 | obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.h
431   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
432   ./AbstractClasses.hpp
433   obj/Utility$(O) : ./Utility.cpp ./Utility.hpp
434 + obj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
435   obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
436   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
437   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 391 | Line 479 | obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp
479   ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
480   ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
481   ./ZConsWriter.hpp
394 – obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
395 – ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
396 – ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
397 – ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
398 – ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
399 – ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
400 – ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
401 – ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
402 – ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
403 – ./fSimulation.h ../libBASS/simError.h
404 – obj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
405 – ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
406 – ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
407 – ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
408 – ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
409 – ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
410 – ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
411 – ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
412 – ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
413 – ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
414 – ./fortranWrapDefines.hpp ./fSimulation.h
415 – obj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
416 – ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
417 – ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
418 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
419 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
420 – ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
421 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
422 – ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
423 – ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
424 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
425 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
426 – ../libBASS/simError.h
427 – obj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
428 – ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
429 – ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
430 – ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
431 – ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
432 – ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
433 – ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
434 – ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
435 – ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
436 – ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
437 – ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
438 – obj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
439 – ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
440 – ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
441 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
442 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
443 – ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
444 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
445 – ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
446 – ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
447 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
448 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
449 – obj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
450 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
451 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
452 – ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
453 – ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
454 – ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
455 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
456 – ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
457 – ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
458 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
459 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
460 – obj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
461 – ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
462 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
463 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
464 – ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
465 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
466 – ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
467 – ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
468 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
469 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
470 – obj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
471 – ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
472 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
473 – ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
482   obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
483   ../libBASS/simError.h
476 – obj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
477 – obj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
478 – ./Quaternion.hpp
479 – obj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
480 – ./Euler3.hpp
481 – obj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
482 – obj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
483 – ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
484 – ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
485 – ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
486 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
487 – ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
488 – ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
489 – ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
490 – ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
491 – ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
492 – ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
493 – ./fortranWrapDefines.hpp ./fSimulation.h
484   MPIobj/mpiForceField$(O) : ./mpiForceField.c
485   MPIobj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
486   MPIobj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
# Line 509 | Line 499 | MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp
499   MPIobj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
500   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
501   ./AbstractClasses.hpp
502 + MPIobj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
503 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
504 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
505 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
506 + ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
507 + ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
508 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
509 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
510 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
511 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
512   MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
513   ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
514   ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 525 | Line 525 | MPIobj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./A
525   ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
526   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
527   ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
528 + MPIobj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
529 + ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
530 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
531 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
532 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
533 + ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
534 + ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
535 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
536 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
537 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
538 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
539 + ../libBASS/simError.h
540 + MPIobj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
541 + ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
542 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
543 + ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
544 + MPIobj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
545 + ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
546 + ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
547 + ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
548 + ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
549 + ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
550 + ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
551 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
552 + ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
553 + ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
554 + ./fortranWrapDefines.hpp ./fSimulation.h
555   MPIobj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
556   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
557   ../libBASS/simError.h ./MatVec3.h
# Line 572 | Line 599 | MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
599   ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
600   ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
601   ./fortranWrappers.hpp
602 + MPIobj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
603   MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
604   MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
605   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 633 | Line 661 | MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../l
661   ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
662   ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
663   ./fortranWrappers.hpp
664 + MPIobj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
665 + ./Euler3.hpp
666   MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
667   MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
668   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
# Line 736 | Line 766 | MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPR
766   ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
767   ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
768   ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
769 + MPIobj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
770 + ./Quaternion.hpp
771   MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
772 + MPIobj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
773 + ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
774 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
775 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
776 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
777 + ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
778 + ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
779 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
780 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
781 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
782 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
783   MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
784   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
785   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 755 | Line 798 | MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMini
798   ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
799   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
800   ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
801 + MPIobj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
802 + ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
803 + ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
804 + ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
805 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
806 + ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
807 + ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
808 + ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
809 + ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
810 + ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
811 + ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
812 + ./fortranWrapDefines.hpp ./fSimulation.h
813   MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
814   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
815   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 767 | Line 822 | MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Ato
822   ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
823   ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
824   ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
825 + MPIobj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
826 + ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
827 + ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
828 + ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
829 + ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
830 + ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
831 + ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
832 + ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
833 + ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
834 + ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
835 + ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
836 + MPIobj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
837 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
838 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
839 + ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
840 + ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
841 + ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
842 + ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
843 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
844 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
845 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
846 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
847   MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
848   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
849   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 836 | Line 913 | MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Ato
913   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
914   ./AbstractClasses.hpp
915   MPIobj/Utility$(O) : ./Utility.cpp ./Utility.hpp
916 + MPIobj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
917   MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
918   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
919   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 883 | Line 961 | MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.
961   ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
962   ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
963   ./ZConsWriter.hpp
886 – MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
887 – ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
888 – ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
889 – ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
890 – ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
891 – ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
892 – ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
893 – ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
894 – ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
895 – ./fSimulation.h ../libBASS/simError.h
896 – MPIobj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
897 – ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
898 – ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
899 – ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
900 – ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
901 – ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
902 – ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
903 – ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
904 – ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
905 – ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
906 – ./fortranWrapDefines.hpp ./fSimulation.h
907 – MPIobj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
908 – ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
909 – ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
910 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
911 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
912 – ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
913 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
914 – ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
915 – ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
916 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
917 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp \
918 – ../libBASS/simError.h
919 – MPIobj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
920 – ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
921 – ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
922 – ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
923 – ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
924 – ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
925 – ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
926 – ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
927 – ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
928 – ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
929 – ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h ./MatVec3.h
930 – MPIobj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
931 – ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
932 – ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
933 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
934 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
935 – ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
936 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
937 – ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
938 – ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
939 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
940 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./MatVec3.h
941 – MPIobj/ShakeMin$(O) : ./ShakeMin.cpp ./ConstraintElement.hpp ./RigidBody.hpp \
942 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
943 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
944 – ./SimState.hpp ./BaseVisitor.hpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
945 – ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
946 – ./ConstraintPair.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
947 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
948 – ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
949 – ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
950 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
951 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
952 – MPIobj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
953 – ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
954 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
955 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
956 – ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
957 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
958 – ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
959 – ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
960 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
961 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
962 – MPIobj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
963 – ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
964 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
965 – ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
964   MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
965   ../libBASS/simError.h
968 – MPIobj/Vector3d$(O) : ./Vector3d.cpp ./Vector3d.hpp ./Mat3x3d.hpp
969 – MPIobj/Quaternion$(O) : ./Quaternion.cpp ./Euler3.hpp ./Vector3d.hpp ./Mat3x3d.hpp \
970 – ./Quaternion.hpp
971 – MPIobj/Mat3x3d$(O) : ./Mat3x3d.cpp ./Mat3x3d.hpp ./Vector3d.hpp ./Quaternion.hpp \
972 – ./Euler3.hpp
973 – MPIobj/Euler3$(O) : ./Euler3.cpp ./Euler3.hpp ./Mat3x3d.hpp ./Quaternion.hpp ./Vector3d.hpp
974 – MPIobj/Roll$(O) : ./Roll.cpp ./Mat3x3d.hpp ./Roll.hpp ./Rattle.hpp ./Shake.hpp \
975 – ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
976 – ./ConstraintIterator.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
977 – ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
978 – ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
979 – ./SimState.hpp ./BaseVisitor.hpp ./Vector3d.hpp ./SimInfo.hpp ./Molecule.hpp \
980 – ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
981 – ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
982 – ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
983 – ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
984 – ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
985 – ./fortranWrapDefines.hpp ./fSimulation.h

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