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Comparing trunk/OOPSE/libmdtools/Make.dep (file contents):
Revision 1233 by gezelter, Wed Jun 2 18:27:52 2004 UTC vs.
Revision 1234 by tim, Fri Jun 4 03:15:31 2004 UTC

# Line 24 | Line 24 | obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./
24   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
25   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
26   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
27 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
28 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
29 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
30 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
31 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
32 < ./MinimizerParameterSet.hpp ./Utility.hpp
27 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
28 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
29 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
30 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
31 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
32 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
33   obj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
34   ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
35   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 43 | Line 43 | obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp
43   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
44   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
45   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
46 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
47 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
48 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
49 < ../libBASS/simError.h ./fortranWrappers.hpp
46 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
47 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
48 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
49 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
50 > ./fortranWrappers.hpp
51   obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
52   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
53   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
54   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
55   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
56   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
57 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
58 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
59 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
60 < ./randomSPRNG.hpp ../libBASS/simError.h
57 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
58 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
59 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
60 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
61 > ../libBASS/simError.h
62   obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
63   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
64   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
65   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
66   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
67   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
68 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
69 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
70 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
71 < ./randomSPRNG.hpp ../libBASS/simError.h
68 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
69 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
70 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
71 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
72 > ../libBASS/simError.h
73   obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
74   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
75   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
76   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
77   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
78   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
79 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
80 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
81 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
82 < ../libBASS/simError.h ./fortranWrappers.hpp
79 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
80 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
81 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
82 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
83 > ./fortranWrappers.hpp
84   obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
85   obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
86   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 84 | Line 88 | obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/sim
88   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
89   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
90   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
91 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
92 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
93 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
94 < ./fortranWrappers.hpp
91 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
92 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
93 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
94 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
95   obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
96   ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
97   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 95 | Line 99 | obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./conf
99   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
100   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
101   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
102 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
103 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
104 < ./fSimulation.h ./fForceField.h
102 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
103 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
104 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h ./fForceField.h
105   obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
106   obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
107   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 108 | Line 112 | obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp
112   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
113   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
114   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
115 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
116 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
117 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
118 < ./randomSPRNG.hpp ../libBASS/simError.h
115 < obj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
116 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
117 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
118 < ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
119 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
120 < ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
121 < ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
122 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
123 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
124 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
115 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
116 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
117 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
118 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
119   ../libBASS/simError.h
120 + obj/Integrator$(O) : ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
121 + ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
122 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
123 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
124 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
125 + ./SimState.hpp ./BaseVisitor.hpp ./Integrator.hpp ./Molecule.hpp ./SRI.hpp \
126 + ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
127 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
128 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
129 + ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
130 + ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
131 + ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
132 + ./ZConsWriter.hpp ../libBASS/simError.h
133   obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
134   ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
135   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
136   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
137   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
138   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
139 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
140 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
141 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
142 < ../libBASS/simError.h ./fortranWrappers.hpp
139 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
140 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
141 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
142 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
143 > ./fortranWrappers.hpp
144   obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
145   obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
146   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
# Line 140 | Line 148 | obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Ato
148   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
149   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
150   ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
151 < ./CutoffGroup.hpp ../libBASS/simError.h
151 > ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
152 > ../libBASS/simError.h
153   obj/mpiSimulation$(O) : ./mpiSimulation.cpp
154   obj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
155   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 148 | Line 157 | obj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./St
157   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
158   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
159   ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
160 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
161 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
162 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
163 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
160 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
161 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
162 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
163 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
164   ./ZConsWriter.hpp ../libBASS/simError.h
165   obj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
166   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 159 | Line 168 | obj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./Sim
168   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
169   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
170   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
171 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
172 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
173 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
174 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
171 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
172 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
173 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
174 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
175 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
176   ./ZConsWriter.hpp ../libBASS/simError.h
177   obj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
178   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 170 | Line 180 | obj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./
180   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
181   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
182   ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
183 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
184 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
185 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
186 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
183 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
184 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
185 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
186 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
187   ./ZConsWriter.hpp ../libBASS/simError.h
188   obj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
189   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 181 | Line 191 | obj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp .
191   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
192   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
193   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
194 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
195 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
196 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
197 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
194 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
195 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
196 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
197 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
198 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
199   ./ZConsWriter.hpp ../libBASS/simError.h
200   obj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
201   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 192 | Line 203 | obj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./St
203   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
204   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
205   ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
206 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
207 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
208 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
209 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
206 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
207 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
208 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
209 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
210   ./ZConsWriter.hpp ../libBASS/simError.h
211   obj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
212   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 203 | Line 214 | obj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEM
214   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
215   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
216   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
217 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
218 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
219 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
220 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
221 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
222 < ./MinimizerParameterSet.hpp
217 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
218 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
219 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
220 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
221 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
222 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./ShakeMin.hpp \
223 > ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
224 > ./ConstraintIterator.hpp
225   obj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
226   ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
227   ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
228   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
229   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
230   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
231 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
232 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
233 < ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
231 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
232 > ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
233 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
234 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
235   obj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
236   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
237   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
238   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
239   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
240   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
241 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
242 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
243 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
244 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
245 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
246 < ./MinimizerParameterSet.hpp ./Utility.hpp
241 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
242 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
243 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
244 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
245 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
246 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
247   obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
248   obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
249   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
# Line 237 | Line 251 | obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp
251   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
252   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
253   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
254 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
255 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
256 < ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h
254 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
255 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
256 > ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
257 > ./fSimulation.h ../libBASS/simError.h
258   obj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
259   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
260   ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
# Line 254 | Line 269 | obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimiz
269   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
270   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
271   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
272 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
273 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
274 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
275 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
276 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
277 < ./MinimizerParameterSet.hpp ./Utility.hpp
272 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
273 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
274 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
275 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
276 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
277 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
278   obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
279   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
280   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
281   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
282   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
283   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
284 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
285 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
286 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
287 < ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
288 < ./MatVec3.h
284 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
285 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
286 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
287 > ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
288 > ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h \
289 > ./ConstraintManager.hpp ./ConstraintIterator.hpp
290   obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
291   ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
292   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
# Line 280 | Line 296 | obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../li
296   ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
297   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
298   ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
299 < ./AbstractClasses.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
300 < ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
301 < ./fForceField.h ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp \
302 < ./AllIntegrator.hpp ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp \
303 < ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp ./MatVec3.h ./NPT.cpp ./NPTi.cpp \
304 < ./NPTxyz.cpp ./ZConstraint.cpp ../libBASS/parse_me.h ./OOPSEMinimizer.hpp \
305 < ./MinimizerParameterSet.hpp
299 > ./AbstractClasses.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
300 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ./Restraints.hpp \
301 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
302 > ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
303 > ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
304 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp ./Integrator.hpp \
305 > ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ../libBASS/simError.h \
306 > ./NPTf.cpp ./MatVec3.h ../libBASS/simError.h ./NPT.cpp ../libBASS/simError.h \
307 > ./NPTi.cpp ../libBASS/simError.h ./NPTxyz.cpp ../libBASS/simError.h \
308 > ./ZConstraint.cpp ../libBASS/simError.h ../libBASS/parse_me.h \
309 > ../libBASS/simError.h ./OOPSEMinimizer.hpp ./MinimizerParameterSet.hpp \
310 > ./ConstraintManager.hpp
311   obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
312   obj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
313   obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
# Line 295 | Line 316 | obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp
316   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
317   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
318   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
319 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
320 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
321 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
322 < ./randomSPRNG.hpp ../libBASS/simError.h
319 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
320 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
321 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
322 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
323 > ../libBASS/simError.h
324   obj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
325   obj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
326   ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
# Line 310 | Line 332 | obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp
332   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
333   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
334   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
335 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
336 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
337 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp \
338 < ./Integrator.hpp ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp \
339 < ./ZConsWriter.hpp ../libBASS/simError.h ./MatVec3.h
335 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
336 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
337 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
338 > ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
339 > ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
340 > ../libBASS/simError.h ./MatVec3.h
341   obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
342   ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
343   obj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
# Line 327 | Line 350 | obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.h
350   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
351   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
352   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
353 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
354 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
355 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
356 < ../libBASS/simError.h ./fortranWrappers.hpp
353 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
354 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
355 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
356 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
357 > ./fortranWrappers.hpp
358   obj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
359   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
360   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
361   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
362   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
363   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
364 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
365 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
366 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
367 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
368 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
369 < ../libBASS/simError.h
364 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
365 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
366 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
367 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
368 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
369 > ./ZConsWriter.hpp ../libBASS/simError.h
370   obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
371   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
372   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
373   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
374   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
375   ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
376 < ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
377 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
378 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
379 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
376 > ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp \
377 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
378 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
379 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
380 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
381   ../libBASS/simError.h
382   obj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
383   ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
# Line 360 | Line 385 | obj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisit
385   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
386   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
387   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
388 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
388 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
389 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
390 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
391 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
392 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
393 > ./ZConsWriter.hpp
394 > obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
395 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
396 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
397 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
398 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
399 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
400 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
401 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
402 > ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
403 > ./fSimulation.h ../libBASS/simError.h
404 > obj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
405 > ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
406 > ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
407 > ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
408 > ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
409 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
410 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
411 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
412 > ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
413 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
414 > ./fortranWrapDefines.hpp ./fSimulation.h
415 > obj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
416 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
417 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
418 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
419 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
420 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
421 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
422 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
423 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
424 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
425 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp
426 > obj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
427 > ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
428 > ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
429 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
430 > ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
431 > ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
432 > ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
433 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
434   ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
435   ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
436 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
437 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp
436 > ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h
437 > obj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
438 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
439 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
440 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
441 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
442 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
443 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
444 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
445 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
446 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
447 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
448 > obj/ShakeMin$(O) : ./ShakeMin.cpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
449 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
450 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
451 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
452 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
453 > ./SimState.hpp ./BaseVisitor.hpp
454 > obj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
455 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
456 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
457 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
458 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
459 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
460 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
461 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
462 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
463 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
464 > obj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
465 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
466 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
467 > ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
468   obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
469   ../libBASS/simError.h
470   MPIobj/mpiForceField$(O) : ./mpiForceField.c
# Line 392 | Line 492 | MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp
492   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
493   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
494   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
495 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
496 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
497 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
498 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
499 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
500 < ./MinimizerParameterSet.hpp ./Utility.hpp
495 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
496 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
497 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
498 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
499 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
500 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
501   MPIobj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
502   ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
503   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 411 | Line 511 | MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.
511   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
512   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
513   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
514 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
515 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
516 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
517 < ../libBASS/simError.h ./fortranWrappers.hpp
514 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
515 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
516 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
517 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
518 > ./fortranWrappers.hpp
519   MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
520   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
521   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
522   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
523   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
524   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
525 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
526 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
527 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
528 < ./randomSPRNG.hpp ../libBASS/simError.h
525 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
526 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
527 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
528 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
529 > ../libBASS/simError.h
530   MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
531   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
532   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
533   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
534   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
535   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
536 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
537 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
538 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
539 < ./randomSPRNG.hpp ../libBASS/simError.h
536 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
537 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
538 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
539 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
540 > ../libBASS/simError.h
541   MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
542   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
543   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
544   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
545   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
546   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
547 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
548 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
549 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
550 < ../libBASS/simError.h ./fortranWrappers.hpp
547 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
548 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
549 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
550 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
551 > ./fortranWrappers.hpp
552   MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
553   MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
554   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 452 | Line 556 | MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/
556   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
557   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
558   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
559 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
560 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
561 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
562 < ./fortranWrappers.hpp
559 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
560 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
561 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
562 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ./fortranWrappers.hpp
563   MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
564   ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
565   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 463 | Line 567 | MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./c
567   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
568   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
569   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
570 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
571 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
572 < ./fSimulation.h ./fForceField.h
570 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
571 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
572 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h ./fForceField.h
573   MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
574   MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
575   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 476 | Line 580 | MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.c
580   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
581   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
582   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
583 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
584 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
585 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
586 < ./randomSPRNG.hpp ../libBASS/simError.h
483 < MPIobj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
484 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
485 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
486 < ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
487 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
488 < ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
489 < ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
490 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
491 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
492 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
583 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
584 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
585 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
586 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
587   ../libBASS/simError.h
588 + MPIobj/Integrator$(O) : ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
589 + ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
590 + ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
591 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
592 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
593 + ./SimState.hpp ./BaseVisitor.hpp ./Integrator.hpp ./Molecule.hpp ./SRI.hpp \
594 + ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
595 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
596 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
597 + ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
598 + ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
599 + ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
600 + ./ZConsWriter.hpp ../libBASS/simError.h
601   MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
602   ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
603   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
604   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
605   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
606   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
607 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
608 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
609 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
610 < ../libBASS/simError.h ./fortranWrappers.hpp
607 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
608 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
609 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
610 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
611 > ./fortranWrappers.hpp
612   MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
613   MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
614   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
# Line 508 | Line 616 | MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./
616   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
617   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
618   ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
619 < ./CutoffGroup.hpp ../libBASS/simError.h
619 > ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp \
620 > ../libBASS/simError.h
621   MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
622   MPIobj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
623   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 516 | Line 625 | MPIobj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp .
625   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
626   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
627   ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
628 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
629 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
630 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
631 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
628 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
629 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
630 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
631 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
632   ./ZConsWriter.hpp ../libBASS/simError.h
633   MPIobj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
634   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 527 | Line 636 | MPIobj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./
636   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
637   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
638   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
639 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
640 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
641 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
642 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
639 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
640 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
641 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
642 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
643 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
644   ./ZConsWriter.hpp ../libBASS/simError.h
645   MPIobj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
646   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 538 | Line 648 | MPIobj/NPTi$(O) : ./NPTi.cpp ./Atom.hpp ./SimState.hpp
648   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
649   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
650   ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
651 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
652 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
653 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
654 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
651 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
652 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
653 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
654 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
655   ./ZConsWriter.hpp ../libBASS/simError.h
656   MPIobj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
657   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 549 | Line 659 | MPIobj/NPTxyz$(O) : ./NPTxyz.cpp ./MatVec3.h ./Atom.hp
659   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
660   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
661   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
662 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
663 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
664 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
665 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
662 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
663 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
664 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
665 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
666 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
667   ./ZConsWriter.hpp ../libBASS/simError.h
668   MPIobj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
669   ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 560 | Line 671 | MPIobj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp .
671   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
672   ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
673   ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
674 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
675 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
676 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
677 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
674 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp \
675 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
676 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
677 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
678   ./ZConsWriter.hpp ../libBASS/simError.h
679   MPIobj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
680   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
# Line 571 | Line 682 | MPIobj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOP
682   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
683   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
684   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
685 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
686 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
687 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
688 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
689 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
690 < ./MinimizerParameterSet.hpp
685 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
686 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
687 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
688 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
689 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
690 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./ShakeMin.hpp \
691 > ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
692 > ./ConstraintIterator.hpp
693   MPIobj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
694   ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
695   ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
696   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
697   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
698   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
699 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
700 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
701 < ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
699 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
700 > ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
701 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
702 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
703   MPIobj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
704   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
705   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
706   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
707   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
708   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
709 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
710 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
711 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
712 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
713 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
714 < ./MinimizerParameterSet.hpp ./Utility.hpp
709 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
710 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
711 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
712 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
713 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
714 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
715   MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
716   MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
717   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
# Line 605 | Line 719 | MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.
719   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
720   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
721   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
722 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
723 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
724 < ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h
722 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
723 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
724 > ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
725 > ./fSimulation.h ../libBASS/simError.h
726   MPIobj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
727   ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
728   ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
# Line 622 | Line 737 | MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMini
737   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
738   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
739   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
740 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
741 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
742 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
743 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
744 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
745 < ./MinimizerParameterSet.hpp ./Utility.hpp
740 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
741 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
742 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
743 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
744 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
745 > ./ZConsWriter.hpp ./MinimizerParameterSet.hpp ./Utility.hpp
746   MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
747   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
748   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
749   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
750   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
751   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
752 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
753 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
754 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
755 < ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
756 < ./MatVec3.h
752 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
753 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
754 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
755 > ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h ../libBASS/simError.h \
756 > ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h ./MatVec3.h \
757 > ./ConstraintManager.hpp ./ConstraintIterator.hpp
758   MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
759   ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
760   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
# Line 648 | Line 764 | MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ..
764   ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
765   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
766   ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
767 < ./AbstractClasses.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
768 < ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
769 < ./fForceField.h ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp \
770 < ./AllIntegrator.hpp ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp \
771 < ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp ./MatVec3.h ./NPT.cpp ./NPTi.cpp \
772 < ./NPTxyz.cpp ./ZConstraint.cpp ../libBASS/parse_me.h ./OOPSEMinimizer.hpp \
773 < ./MinimizerParameterSet.hpp
767 > ./AbstractClasses.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
768 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ./Restraints.hpp \
769 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
770 > ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp ./AllIntegrator.hpp \
771 > ./Integrator.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
772 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp ./Integrator.hpp \
773 > ./ZConsWriter.hpp ../libBASS/simError.h ./NVT.cpp ../libBASS/simError.h \
774 > ./NPTf.cpp ./MatVec3.h ../libBASS/simError.h ./NPT.cpp ../libBASS/simError.h \
775 > ./NPTi.cpp ../libBASS/simError.h ./NPTxyz.cpp ../libBASS/simError.h \
776 > ./ZConstraint.cpp ../libBASS/simError.h ../libBASS/parse_me.h \
777 > ../libBASS/simError.h ./OOPSEMinimizer.hpp ./MinimizerParameterSet.hpp \
778 > ./ConstraintManager.hpp
779   MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
780   MPIobj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
781   MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
# Line 663 | Line 784 | MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.h
784   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
785   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
786   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
787 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
788 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
789 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
790 < ./randomSPRNG.hpp ../libBASS/simError.h
787 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
788 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
789 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
790 > ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp ./randomSPRNG.hpp \
791 > ../libBASS/simError.h
792   MPIobj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
793   MPIobj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
794   ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
# Line 678 | Line 800 | MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.h
800   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
801   ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
802   ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
803 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
804 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
805 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp \
806 < ./Integrator.hpp ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp \
807 < ./ZConsWriter.hpp ../libBASS/simError.h ./MatVec3.h
803 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
804 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
805 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
806 > ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp ./Integrator.hpp \
807 > ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp ./ZConsWriter.hpp \
808 > ../libBASS/simError.h ./MatVec3.h
809   MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
810   ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
811   MPIobj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
# Line 695 | Line 818 | MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Ato
818   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
819   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
820   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
821 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
822 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
823 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
824 < ../libBASS/simError.h ./fortranWrappers.hpp
821 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
822 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
823 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
824 > ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h ../libBASS/simError.h \
825 > ./fortranWrappers.hpp
826   MPIobj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
827   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
828   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
829   ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
830   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
831   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
832 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
833 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
834 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
835 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
836 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
837 < ../libBASS/simError.h
832 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
833 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
834 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
835 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
836 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
837 > ./ZConsWriter.hpp ../libBASS/simError.h
838   MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
839   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
840   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
841   ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
842   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
843   ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
844 < ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
845 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
846 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
847 < ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
844 > ./CutoffGroup.hpp ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp \
845 > ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
846 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
847 > ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
848 > ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
849   ../libBASS/simError.h
850   MPIobj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
851   ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
# Line 728 | Line 853 | MPIobj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVi
853   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
854   ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
855   ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
856 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
856 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
857 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./SimInfo.hpp ./Exclude.hpp \
858 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
859 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
860 > ./ForceFields.hpp ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp \
861 > ./ZConsWriter.hpp
862 > MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
863 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
864 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
865 > ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
866 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
867 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
868 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./ConstraintPair.hpp \
869 > ./ConstraintElement.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
870 > ../libBASS/BASS_interface.h ./fSimulation.h ./fortranWrapDefines.hpp \
871 > ./fSimulation.h ../libBASS/simError.h
872 > MPIobj/ConstraintManager$(O) : ./ConstraintManager.cpp ./ConstraintManager.hpp \
873 > ./Molecule.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
874 > ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
875 > ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
876 > ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
877 > ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
878 > ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp \
879 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./ConstraintIterator.hpp \
880 > ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
881 > ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
882 > ./fortranWrapDefines.hpp ./fSimulation.h
883 > MPIobj/ConstraintAlgorithm$(O) : ./ConstraintAlgorithm.cpp ./ConstraintAlgorithm.hpp \
884 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
885 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
886 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
887 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
888 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
889 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
890 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
891 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
892 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
893 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ConstraintManager.hpp
894 > MPIobj/Shake$(O) : ./Shake.cpp ./Shake.hpp ./ConstraintAlgorithm.hpp ./CallbackFunctor.hpp \
895 > ./TypeInfo.hpp ./ConstraintIterator.hpp ./ConstraintPair.hpp \
896 > ./ConstraintElement.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
897 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
898 > ./GenericData.hpp ./Atom.hpp ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
899 > ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
900 > ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
901 > ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
902   ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
903   ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
904 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
905 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp
904 > ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h
905 > MPIobj/Rattle$(O) : ./Rattle.cpp ./Rattle.hpp ./Shake.hpp ./ConstraintAlgorithm.hpp \
906 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
907 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
908 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
909 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
910 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
911 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
912 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
913 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
914 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
915 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
916 > MPIobj/ShakeMin$(O) : ./ShakeMin.cpp ./ShakeMin.hpp ./ConstraintAlgorithm.hpp \
917 > ./CallbackFunctor.hpp ./TypeInfo.hpp ./ConstraintIterator.hpp \
918 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
919 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
920 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
921 > ./SimState.hpp ./BaseVisitor.hpp
922 > MPIobj/CallbackFunctor$(O) : ./CallbackFunctor.cpp ./CallbackFunctor.hpp ./TypeInfo.hpp \
923 > ./ConstraintPair.hpp ./ConstraintElement.hpp ./RigidBody.hpp \
924 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
925 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
926 > ./SimState.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./Molecule.hpp ./SRI.hpp \
927 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
928 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
929 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
930 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
931 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
932 > MPIobj/ConstraintElement$(O) : ./ConstraintElement.cpp ./ConstraintElement.hpp \
933 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
934 > ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
935 > ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp
936   MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
937   ../libBASS/simError.h

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