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Comparing trunk/OOPSE/libmdtools/Make.dep (file contents):
Revision 1199 by gezelter, Thu May 27 15:21:20 2004 UTC vs.
Revision 1224 by gezelter, Wed Jun 2 18:27:52 2004 UTC

# Line 4 | Line 4 | obj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom
4   obj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h
5   obj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
6   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
7 + obj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
8 + ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
9 + ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
10 + ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
11   obj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
12   ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
13   obj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
# Line 14 | Line 18 | obj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hp
18   obj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
19   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
20   ./AbstractClasses.hpp
21 + obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
22 + ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
23 + ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
24 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
25 + ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
26 + ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
27 + ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
28 + ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
29 + ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
30 + ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
31 + ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
32 + ./MinimizerParameterSet.hpp ./Utility.hpp
33 + obj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
34 + ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
35 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
36 + ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
37   obj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
38   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
39   ../libBASS/simError.h ./MatVec3.h
40 < obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
41 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
42 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
40 > obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
41 > ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
42 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
43   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
44   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
45   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
46   ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
47   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
48 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
49 < ./randomSPRNG.hpp ../libBASS/simError.h
48 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
49 > ../libBASS/simError.h ./fortranWrappers.hpp
50   obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
51   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
52   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 37 | Line 57 | obj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp
57   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
58   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
59   ./randomSPRNG.hpp ../libBASS/simError.h
60 < obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
61 < obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
62 < ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
43 < ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
44 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
45 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
46 < ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
47 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
48 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
49 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
50 < ./randomSPRNG.hpp ../libBASS/simError.h
51 < obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
52 < ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
53 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
60 > obj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
61 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
62 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
63   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
64   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
65   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
66   ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
67   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
68 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
69 < ../libBASS/simError.h ./fortranWrappers.hpp
68 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
69 > ./randomSPRNG.hpp ../libBASS/simError.h
70   obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
71   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
72   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 68 | Line 77 | obj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom
77   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
78   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
79   ../libBASS/simError.h ./fortranWrappers.hpp
80 < obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
81 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
82 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
83 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
84 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
85 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
80 > obj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
81 > obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
82 > ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
83 > ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
84 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
85 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
86 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
87   ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
88   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
89   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
90 < ../libBASS/simError.h ./fortranWrappers.hpp
91 < obj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
92 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
93 < ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
94 < ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
95 < obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
96 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
97 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
88 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
89 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
90 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
90 > ./fortranWrappers.hpp
91 > obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
92 > ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
93 > ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
94 > ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
95 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
96 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
97 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
98   ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
99   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
100 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
101 < ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
102 < ./MatVec3.h
103 < obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
104 < ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
105 < ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
106 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
107 < ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
108 < ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
109 < ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
110 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
104 < ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
105 < ./AbstractClasses.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
106 < ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
107 < ./fForceField.h ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp \
108 < ./AllIntegrator.hpp ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp \
109 < ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp ./MatVec3.h ./NPT.cpp ./NPTi.cpp \
110 < ./NPTxyz.cpp ./ZConstraint.cpp ../libBASS/parse_me.h ./OOPSEMinimizer.hpp \
111 < ./MinimizerParameterSet.hpp
112 < obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
113 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
114 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
115 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
116 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
117 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
100 > ./fSimulation.h ./fForceField.h
101 > obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
102 > obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
103 > ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
104 > ./DirectionalAtom.hpp ./AbstractClasses.hpp
105 > obj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
106 > ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
107 > ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
108 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
109 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
110 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
111   ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
112   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
113   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
114   ./randomSPRNG.hpp ../libBASS/simError.h
122 – obj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
123 – ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
124 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
125 – ../libBASS/AtomStamp.hpp ../libBASS/simError.h
115   obj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
116   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
117   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
# Line 134 | Line 123 | obj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp
123   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
124   ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
125   ../libBASS/simError.h
126 < obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
138 < ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
139 < ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
140 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
141 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
142 < ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
143 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
144 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
145 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp \
146 < ./Integrator.hpp ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp \
147 < ./ZConsWriter.hpp ../libBASS/simError.h ./MatVec3.h
148 < obj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
149 < ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
150 < ./DirectionalAtom.hpp ./AbstractClasses.hpp
151 < obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
152 < ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
153 < obj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
154 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
155 < ./AbstractClasses.hpp
156 < obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
126 > obj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
127   ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
128   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
129   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 163 | Line 133 | obj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp
133   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
134   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
135   ../libBASS/simError.h ./fortranWrappers.hpp
136 < obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
167 < obj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
168 < ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
169 < ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
170 < ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
171 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
172 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
173 < ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
174 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
175 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
176 < ./fSimulation.h ./fForceField.h
177 < obj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
178 < ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
179 < ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
180 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
181 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
182 < ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
183 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
184 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
185 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
186 < ./fortranWrappers.hpp
136 > obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
137   obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
138   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
139   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
# Line 191 | Line 141 | obj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Ato
141   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
142   ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
143   ./CutoffGroup.hpp ../libBASS/simError.h
144 + obj/mpiSimulation$(O) : ./mpiSimulation.cpp
145 + obj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
146 + ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
147 + ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
148 + ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
149 + ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
150 + ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
151 + ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
152 + ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
153 + ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
154 + ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
155 + ./ZConsWriter.hpp ../libBASS/simError.h
156   obj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
157   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
158   ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
# Line 235 | Line 197 | obj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp ./St
197   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
198   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
199   ./ZConsWriter.hpp ../libBASS/simError.h
238 – obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
239 – obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
240 – ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
241 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
242 – ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
243 – ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
244 – ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
245 – ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
246 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
247 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
248 – ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
249 – ../libBASS/simError.h
250 – obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
251 – ../libBASS/simError.h
252 – obj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
253 – obj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
254 – obj/mpiSimulation$(O) : ./mpiSimulation.cpp
255 – obj/Utility$(O) : ./Utility.cpp ./Utility.hpp
200   obj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
201   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
202   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 265 | Line 209 | obj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEM
209   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
210   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
211   ./MinimizerParameterSet.hpp
212 < obj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
213 < ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
214 < ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
215 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
216 < ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
217 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
218 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
219 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
220 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
277 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
278 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
279 < ./MinimizerParameterSet.hpp ./Utility.hpp
212 > obj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
213 > ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
214 > ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
215 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
216 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
217 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
218 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
219 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
220 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
221   obj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
222   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
223   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 289 | Line 230 | obj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integ
230   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
231   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
232   ./MinimizerParameterSet.hpp ./Utility.hpp
233 + obj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
234 + obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
235 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
236 + ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
237 + ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
238 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
239 + ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
240 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
241 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
242 + ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h
243 + obj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
244 + ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
245 + ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
246 + ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
247 + obj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
248 + ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
249 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
250 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
251   obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
252   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
253   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 301 | Line 260 | obj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimiz
260   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
261   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
262   ./MinimizerParameterSet.hpp ./Utility.hpp
263 + obj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
264 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
265 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
266 + ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
267 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
268 + ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
269 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
270 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
271 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
272 + ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
273 + ./MatVec3.h
274 + obj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
275 + ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
276 + ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
277 + ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
278 + ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
279 + ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
280 + ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
281 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
282 + ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
283 + ./AbstractClasses.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
284 + ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
285 + ./fForceField.h ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp \
286 + ./AllIntegrator.hpp ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp \
287 + ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp ./MatVec3.h ./NPT.cpp ./NPTi.cpp \
288 + ./NPTxyz.cpp ./ZConstraint.cpp ../libBASS/parse_me.h ./OOPSEMinimizer.hpp \
289 + ./MinimizerParameterSet.hpp
290 + obj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
291 + obj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
292 + obj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
293 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
294 + ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
295 + ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
296 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
297 + ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
298 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
299 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
300 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
301 + ./randomSPRNG.hpp ../libBASS/simError.h
302 + obj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
303 + obj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
304 + ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
305 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
306 + ../libBASS/AtomStamp.hpp ../libBASS/simError.h
307 + obj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
308 + ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
309 + ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
310 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
311 + ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
312 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
313 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
314 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
315 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp \
316 + ./Integrator.hpp ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp \
317 + ./ZConsWriter.hpp ../libBASS/simError.h ./MatVec3.h
318 + obj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
319 + ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
320 + obj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
321 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
322 + ./AbstractClasses.hpp
323 + obj/Utility$(O) : ./Utility.cpp ./Utility.hpp
324 + obj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
325 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
326 + ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
327 + ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
328 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
329 + ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
330 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
331 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
332 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
333 + ../libBASS/simError.h ./fortranWrappers.hpp
334   obj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
335   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
336   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 313 | Line 343 | obj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.
343   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
344   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
345   ../libBASS/simError.h
346 < obj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
347 < ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
348 < ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
349 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
320 < obj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
321 < ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
322 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
323 < ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
324 < obj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
325 < ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
326 < ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
327 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
328 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
346 > obj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
347 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
348 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
349 > ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
350   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
351 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
352 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
353 < ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
354 < obj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
355 < ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
356 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
336 < ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
351 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
352 > ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
353 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
354 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
355 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
356 > ../libBASS/simError.h
357   obj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
358   ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
359   ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 345 | Line 365 | obj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisit
365   ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
366   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
367   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp
368 < obj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
369 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
350 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
351 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
352 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
353 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
354 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
355 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
356 < ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h
368 > obj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
369 > ../libBASS/simError.h
370   MPIobj/mpiForceField$(O) : ./mpiForceField.c
371   MPIobj/MatVec3$(O) : ./MatVec3.c ../libBASS/simError.h ./MatVec3.h
372   MPIobj/fInfo$(O) : ./fInfo.c ./config.h ../libBASS/simError.h
373   MPIobj/Atom$(O) : ./Atom.cpp ../libBASS/simError.h ./Atom.hpp ./SimState.hpp \
374   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp
375 + MPIobj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
376 + ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
377 + ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
378 + ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
379   MPIobj/Bend$(O) : ./Bend.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
380   ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
381   MPIobj/BendExtensions$(O) : ./BendExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
# Line 369 | Line 386 | MPIobj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI
386   MPIobj/BondExtensions$(O) : ./BondExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
387   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
388   ./AbstractClasses.hpp
389 + MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
390 + ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
391 + ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
392 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
393 + ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
394 + ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
395 + ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
396 + ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
397 + ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
398 + ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
399 + ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
400 + ./MinimizerParameterSet.hpp ./Utility.hpp
401 + MPIobj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
402 + ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
403 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
404 + ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
405   MPIobj/DirectionalAtom$(O) : ./DirectionalAtom.cpp ./Atom.hpp ./SimState.hpp \
406   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
407   ../libBASS/simError.h ./MatVec3.h
408 < MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
409 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
410 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
408 > MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
409 > ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
410 > ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
411   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
412   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
413   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
414   ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
415   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
416 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
417 < ./randomSPRNG.hpp ../libBASS/simError.h
416 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
417 > ../libBASS/simError.h ./fortranWrappers.hpp
418   MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
419   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
420   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 392 | Line 425 | MPIobj/DumpReader$(O) : ./DumpReader.cpp ./ReadWrite.h
425   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
426   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
427   ./randomSPRNG.hpp ../libBASS/simError.h
428 < MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
429 < MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
430 < ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
398 < ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
399 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
400 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
401 < ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
402 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
403 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
404 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
405 < ./randomSPRNG.hpp ../libBASS/simError.h
406 < MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
407 < ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
408 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
428 > MPIobj/DumpWriter$(O) : ./DumpWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
429 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
430 > ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
431   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
432   ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
433   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
434   ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
435   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
436 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
437 < ../libBASS/simError.h ./fortranWrappers.hpp
436 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
437 > ./randomSPRNG.hpp ../libBASS/simError.h
438   MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
439   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
440   ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
# Line 423 | Line 445 | MPIobj/EAM_FF$(O) : ./EAM_FF.cpp ./ForceFields.hpp ./A
445   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
446   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
447   ../libBASS/simError.h ./fortranWrappers.hpp
448 < MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
449 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
450 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
451 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
452 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
453 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
448 > MPIobj/Exclude$(O) : ./Exclude.cpp ./Exclude.hpp
449 > MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
450 > ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
451 > ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
452 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
453 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
454 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
455   ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
456   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
457   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
458 < ../libBASS/simError.h ./fortranWrappers.hpp
459 < MPIobj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
460 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
461 < ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
462 < ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
463 < MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
464 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
465 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
443 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
444 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
445 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
458 > ./fortranWrappers.hpp
459 > MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
460 > ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
461 > ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
462 > ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
463 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
464 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
465 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
466   ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
467   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
468 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
469 < ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
470 < ./MatVec3.h
471 < MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
472 < ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
473 < ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
474 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
475 < ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
476 < ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
477 < ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
478 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
459 < ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
460 < ./AbstractClasses.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
461 < ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
462 < ./fForceField.h ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp \
463 < ./AllIntegrator.hpp ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp \
464 < ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp ./MatVec3.h ./NPT.cpp ./NPTi.cpp \
465 < ./NPTxyz.cpp ./ZConstraint.cpp ../libBASS/parse_me.h ./OOPSEMinimizer.hpp \
466 < ./MinimizerParameterSet.hpp
467 < MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
468 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
469 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
470 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
471 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
472 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
468 > ./fSimulation.h ./fForceField.h
469 > MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
470 > MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
471 > ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
472 > ./DirectionalAtom.hpp ./AbstractClasses.hpp
473 > MPIobj/InitializeFromFile$(O) : ./InitializeFromFile.cpp ./ReadWrite.hpp ./Atom.hpp \
474 > ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
475 > ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
476 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
477 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
478 > ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
479   ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
480   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
481   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
482   ./randomSPRNG.hpp ../libBASS/simError.h
477 – MPIobj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
478 – ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
479 – ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
480 – ../libBASS/AtomStamp.hpp ../libBASS/simError.h
483   MPIobj/Integrator$(O) : ./Integrator.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
484   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
485   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
# Line 489 | Line 491 | MPIobj/Integrator$(O) : ./Integrator.cpp ./Integrator.
491   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
492   ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
493   ../libBASS/simError.h
494 < MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
493 < ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
494 < ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
495 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
496 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
497 < ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
498 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
499 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
500 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp \
501 < ./Integrator.hpp ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp \
502 < ./ZConsWriter.hpp ../libBASS/simError.h ./MatVec3.h
503 < MPIobj/GhostBend$(O) : ./GhostBend.cpp ../libBASS/simError.h ./SRI.hpp ./Atom.hpp \
504 < ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
505 < ./DirectionalAtom.hpp ./AbstractClasses.hpp
506 < MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
507 < ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
508 < MPIobj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
509 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
510 < ./AbstractClasses.hpp
511 < MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
494 > MPIobj/LJFF$(O) : ./LJFF.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
495   ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp ./RigidBody.hpp \
496   ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
497   ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 518 | Line 501 | MPIobj/DUFF$(O) : ./DUFF.cpp ./ForceFields.hpp ./Atom.
501   ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
502   ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
503   ../libBASS/simError.h ./fortranWrappers.hpp
504 < MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
522 < MPIobj/fortranWrappers$(O) : ./fortranWrappers.cpp ./config.h ./fSimulation.h \
523 < ./fortranWrappers.hpp ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
524 < ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
525 < ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
526 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
527 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
528 < ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
529 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
530 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
531 < ./fSimulation.h ./fForceField.h
532 < MPIobj/ForceFields$(O) : ./ForceFields.cpp ../libBASS/simError.h ./ForceFields.hpp \
533 < ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
534 < ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
535 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
536 < ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
537 < ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
538 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
539 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
540 < ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
541 < ./fortranWrappers.hpp
504 > MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
505   MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./Atom.hpp ./SimState.hpp \
506   ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp \
507   ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
# Line 546 | Line 509 | MPIobj/Molecule$(O) : ./Molecule.cpp ./Molecule.hpp ./
509   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
510   ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
511   ./CutoffGroup.hpp ../libBASS/simError.h
512 + MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
513 + MPIobj/NPT$(O) : ./NPT.cpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
514 + ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
515 + ./SimInfo.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
516 + ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp \
517 + ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
518 + ../libBASS/TorsionStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp \
519 + ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
520 + ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
521 + ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
522 + ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
523 + ./ZConsWriter.hpp ../libBASS/simError.h
524   MPIobj/NPTf$(O) : ./NPTf.cpp ./MatVec3.h ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
525   ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
526   ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
# Line 590 | Line 565 | MPIobj/NVT$(O) : ./NVT.cpp ./Atom.hpp ./SimState.hpp .
565   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
566   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./Integrator.hpp \
567   ./ZConsWriter.hpp ../libBASS/simError.h
593 – MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
594 – MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
595 – ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
596 – ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
597 – ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
598 – ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
599 – ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
600 – ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
601 – ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
602 – ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
603 – ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
604 – ../libBASS/simError.h
605 – MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
606 – ../libBASS/simError.h
607 – MPIobj/mdProfile$(O) : ./mdProfile.cpp ./config.h ../libBASS/simError.h ./mdProfile.hpp
608 – MPIobj/GenericData$(O) : ./GenericData.cpp ./GenericData.hpp
609 – MPIobj/mpiSimulation$(O) : ./mpiSimulation.cpp
610 – MPIobj/Utility$(O) : ./Utility.cpp ./Utility.hpp
568   MPIobj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp \
569   ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
570   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 620 | Line 577 | MPIobj/OOPSEMinimizer$(O) : ./OOPSEMinimizer.cpp ./OOP
577   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
578   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
579   ./MinimizerParameterSet.hpp
580 < MPIobj/CGFamilyMinimizer$(O) : ./CGFamilyMinimizer.cpp ./OOPSEMinimizer.hpp \
581 < ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp \
582 < ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
583 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/AtomStamp.hpp \
584 < ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp \
585 < ../libBASS/TorsionStamp.hpp ../libBASS/RigidBodyStamp.hpp \
586 < ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp ./CutoffGroup.hpp ./SimInfo.hpp \
587 < ./Exclude.hpp ./SkipList.hpp ../libBASS/MakeStamps.hpp \
588 < ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
632 < ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
633 < ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
634 < ./MinimizerParameterSet.hpp ./Utility.hpp
580 > MPIobj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
581 > ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
582 > ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
583 > ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
584 > ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
585 > ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
586 > ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
587 > ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
588 > ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
589   MPIobj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
590   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
591   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 644 | Line 598 | MPIobj/PRCG$(O) : ./PRCG.cpp ./OOPSEMinimizer.hpp ./In
598   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
599   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
600   ./MinimizerParameterSet.hpp ./Utility.hpp
601 + MPIobj/randomSPRNG$(O) : ./randomSPRNG.cpp ./randomSPRNG.hpp ../libBASS/simError.h
602 + MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
603 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
604 + ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
605 + ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
606 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
607 + ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
608 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
609 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
610 + ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h
611 + MPIobj/RigidBody$(O) : ./RigidBody.cpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
612 + ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./StuntDouble.hpp \
613 + ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp \
614 + ./BaseVisitor.hpp ../libBASS/simError.h ./MatVec3.h
615 + MPIobj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
616 + ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
617 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
618 + ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
619   MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMinimizer.hpp ./Integrator.hpp ./Atom.hpp \
620   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
621   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 656 | Line 628 | MPIobj/SDMinimizer$(O) : ./SDMinimizer.cpp ./OOPSEMini
628   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
629   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
630   ./MinimizerParameterSet.hpp ./Utility.hpp
631 + MPIobj/SimInfo$(O) : ./SimInfo.cpp ./SimInfo.hpp ./Atom.hpp ./SimState.hpp \
632 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./RigidBody.hpp \
633 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
634 + ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
635 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
636 + ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
637 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
638 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
639 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fSimulation.h \
640 + ../libBASS/simError.h ./fortranWrappers.hpp ./ForceFields.hpp ./fForceField.h \
641 + ./MatVec3.h
642 + MPIobj/SimSetup$(O) : ./SimSetup.cpp ./SimSetup.hpp ../libBASS/MakeStamps.hpp \
643 + ../libBASS/BASS_interface.h ../libBASS/MoleculeStamp.hpp \
644 + ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
645 + ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
646 + ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp \
647 + ../libBASS/Globals.hpp ../libBASS/Component.hpp ../libBASS/LinkedCommand.hpp \
648 + ../libBASS/ZconStamp.hpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
649 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
650 + ./RigidBody.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
651 + ./AbstractClasses.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
652 + ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h \
653 + ./fForceField.h ./ReadWrite.hpp ./Thermo.hpp ./randomSPRNG.hpp \
654 + ./AllIntegrator.hpp ./Integrator.cpp ./Integrator.hpp ./ZConsWriter.hpp \
655 + ../libBASS/simError.h ./NVT.cpp ./NPTf.cpp ./MatVec3.h ./NPT.cpp ./NPTi.cpp \
656 + ./NPTxyz.cpp ./ZConstraint.cpp ../libBASS/parse_me.h ./OOPSEMinimizer.hpp \
657 + ./MinimizerParameterSet.hpp
658 + MPIobj/SimState$(O) : ./SimState.cpp ../libBASS/simError.h ./SimState.hpp
659 + MPIobj/SkipList$(O) : ./SkipList.cpp ./SkipList.hpp
660 + MPIobj/StatWriter$(O) : ./StatWriter.cpp ./ReadWrite.hpp ./Atom.hpp ./SimState.hpp \
661 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
662 + ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
663 + ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
664 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
665 + ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
666 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
667 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
668 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./Thermo.hpp \
669 + ./randomSPRNG.hpp ../libBASS/simError.h
670 + MPIobj/StreamTokenizer$(O) : ./StreamTokenizer.cpp ./StreamTokenizer.hpp
671 + MPIobj/StuntDouble$(O) : ./StuntDouble.cpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
672 + ./SimState.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./RigidBody.hpp \
673 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
674 + ../libBASS/AtomStamp.hpp ../libBASS/simError.h
675 + MPIobj/Thermo$(O) : ./Thermo.cpp ./Thermo.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
676 + ./GenericData.hpp ./BaseVisitor.hpp ./SRI.hpp ./DirectionalAtom.hpp \
677 + ./AbstractClasses.hpp ./SimInfo.hpp ./RigidBody.hpp \
678 + ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
679 + ../libBASS/AtomStamp.hpp ./Molecule.hpp ../libBASS/MoleculeStamp.hpp \
680 + ../libBASS/BondStamp.hpp ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
681 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
682 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
683 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./randomSPRNG.hpp \
684 + ./Integrator.hpp ./ForceFields.hpp ./fForceField.h ./ReadWrite.hpp \
685 + ./ZConsWriter.hpp ../libBASS/simError.h ./MatVec3.h
686 + MPIobj/Torsion$(O) : ./Torsion.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
687 + ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp
688 + MPIobj/TorsionExtensions$(O) : ./TorsionExtensions.cpp ./SRI.hpp ./Atom.hpp ./SimState.hpp \
689 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./DirectionalAtom.hpp \
690 + ./AbstractClasses.hpp
691 + MPIobj/Utility$(O) : ./Utility.cpp ./Utility.hpp
692 + MPIobj/WATER$(O) : ./WATER.cpp ./ForceFields.hpp ./Atom.hpp ./SimState.hpp \
693 + ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
694 + ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
695 + ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
696 + ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
697 + ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
698 + ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
699 + ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
700 + ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./fForceField.h \
701 + ../libBASS/simError.h ./fortranWrappers.hpp
702   MPIobj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp \
703   ./SimState.hpp ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp \
704   ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp ./AbstractClasses.hpp \
# Line 668 | Line 711 | MPIobj/ZConsReader$(O) : ./ZConsReader.cpp ./ZConsRead
711   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
712   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
713   ../libBASS/simError.h
714 < MPIobj/AtomVisitor$(O) : ./AtomVisitor.cpp ./AtomVisitor.hpp ./BaseVisitor.hpp \
715 < ./DirectionalAtom.hpp ./StuntDouble.hpp ./GenericData.hpp ./Atom.hpp \
716 < ./SimState.hpp ./MatVec3.h ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
717 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp
675 < MPIobj/CompositeVisitor$(O) : ./CompositeVisitor.cpp ./CompositeVisitor.hpp \
676 < ./BaseVisitor.hpp ./StuntDouble.hpp ./GenericData.hpp ./RigidBody.hpp \
677 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
678 < ../libBASS/AtomStamp.hpp ./DirectionalAtom.hpp ./Atom.hpp ./SimState.hpp
679 < MPIobj/OtherVisitor$(O) : ./OtherVisitor.cpp ./OtherVisitor.hpp ./BaseVisitor.hpp \
680 < ./StuntDouble.hpp ./GenericData.hpp ./DirectionalAtom.hpp ./Atom.hpp \
681 < ./SimState.hpp ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp \
682 < ../libBASS/LinkedAssign.hpp ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp \
683 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
714 > MPIobj/ZConstraint$(O) : ./ZConstraint.cpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp \
715 > ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./Molecule.hpp ./SRI.hpp \
716 > ./DirectionalAtom.hpp ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp \
717 > ../libBASS/AtomStamp.hpp ../libBASS/LinkedAssign.hpp ../libBASS/BondStamp.hpp \
718   ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
719 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp \
720 < ./SkipList.hpp ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h \
721 < ./Restraints.hpp ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h
722 < MPIobj/RigidBodyVisitor$(O) : ./RigidBodyVisitor.cpp ./RigidBodyVisitor.hpp \
723 < ./BaseVisitor.hpp ./GenericData.hpp ./RigidBody.hpp \
724 < ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
691 < ../libBASS/AtomStamp.hpp ./StuntDouble.hpp ./MatVec3.h
719 > ../libBASS/RigidBodyStamp.hpp ../libBASS/CutoffGroupStamp.hpp ./RigidBody.hpp \
720 > ./CutoffGroup.hpp ./SimInfo.hpp ./Exclude.hpp ./SkipList.hpp \
721 > ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./Restraints.hpp \
722 > ./fSimulation.h ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp \
723 > ./fForceField.h ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp \
724 > ../libBASS/simError.h
725   MPIobj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVisitor.hpp ./BaseVisitor.hpp \
726   ./ZConsReader.hpp ./Integrator.hpp ./Atom.hpp ./SimState.hpp ./StuntDouble.hpp \
727   ./GenericData.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
# Line 700 | Line 733 | MPIobj/ZconsVisitor$(O) : ./ZconsVisitor.cpp ./ZconsVi
733   ../libBASS/BASS_interface.h ./Restraints.hpp ./fSimulation.h \
734   ./fortranWrapDefines.hpp ./fSimulation.h ./ForceFields.hpp ./fForceField.h \
735   ./Thermo.hpp ./randomSPRNG.hpp ./ReadWrite.hpp ./ZConsWriter.hpp
736 < MPIobj/Restraints$(O) : ./Restraints.cpp ./Restraints.hpp ./Atom.hpp ./SimState.hpp \
737 < ./StuntDouble.hpp ./GenericData.hpp ./BaseVisitor.hpp ./SimInfo.hpp \
705 < ./RigidBody.hpp ../libBASS/RigidBodyStamp.hpp ../libBASS/LinkedAssign.hpp \
706 < ../libBASS/AtomStamp.hpp ./Molecule.hpp ./SRI.hpp ./DirectionalAtom.hpp \
707 < ./AbstractClasses.hpp ../libBASS/MoleculeStamp.hpp ../libBASS/BondStamp.hpp \
708 < ../libBASS/BendStamp.hpp ../libBASS/TorsionStamp.hpp \
709 < ../libBASS/CutoffGroupStamp.hpp ./CutoffGroup.hpp ./Exclude.hpp ./SkipList.hpp \
710 < ../libBASS/MakeStamps.hpp ../libBASS/BASS_interface.h ./fSimulation.h \
711 < ./fortranWrapDefines.hpp ./fSimulation.h ../libBASS/simError.h
736 > MPIobj/ZConsWriter$(O) : ./ZConsWriter.cpp ./ZConsWriter.hpp ./GenericData.hpp \
737 > ../libBASS/simError.h

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