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# include paths starting with "." are all relative to the SUBDIRS!!! |
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INCLUDES= -I.. -I../../libBASS -I$(SPRNG_INC) |
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< |
MPI_INCLUDES= -I$(MPICH_INC) -I$(MPICH_INC)/mpi2c++ -I$(MPI_F90_MODS) |
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> |
MPI_INCLUDES= -I$(MPICH_INC) -I$(MPI_F90_MODS) |
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CFLAGS=$(CFLAGS_C) $(INCLUDES) $(DECLARES) $(MPI_INCLUDES) |
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CXXFLAGS=$(CXXFLAGS_C) $(INCLUDES) $(DECLARES) |
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C_FILES = $(DIR)/mpiForceField.c |
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CXX_FILES = \ |
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+ |
$(DIR)/Atom.cpp \ |
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$(DIR)/Bend.cpp \ |
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$(DIR)/BendExtensions.cpp \ |
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$(DIR)/Bond.cpp \ |
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$(DIR)/BondExtensions.cpp \ |
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– |
$(DIR)/DipoleTestFF.cpp \ |
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$(DIR)/DirectionalAtom.cpp \ |
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$(DIR)/DumpWriter.cpp \ |
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$(DIR)/Exclude.cpp \ |
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$(DIR)/InitializeFromFile.cpp \ |
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$(DIR)/LJ_FF.cpp \ |
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$(DIR)/SimInfo.cpp \ |
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$(DIR)/Torsion.cpp \ |
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$(DIR)/TorsionExtensions.cpp \ |
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$(DIR)/TraPPE_ExFF.cpp \ |
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$(DIR)/TraPPEFF.cpp \ |
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$(DIR)/Verlet.cpp \ |
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$(DIR)/randomSPRNG.cpp \ |
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$(DIR)/fortranWrappers.cpp \ |
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$(DIR)/ForceFields.cpp \ |
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< |
$(DIR)/mpiSimulation.cpp |
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> |
$(DIR)/mpiSimulation.cpp \ |
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> |
$(DIR)/Molecule.cpp |
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F90_FILES= \ |
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include Make.dep |
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< |
# known dependencies |
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> |
obj/$(F_MACH_DEFS): ./Linux_ifc_machdep.F90 |
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177 |
< |
obj/$(F_MACH_DEFS): Linux_ifc_machdep.F90 |
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> |
obj/vector_class$(O): ./vector_class.F90 |
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< |
obj/vector_class$(O): vector_class.F90 |
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< |
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180 |
< |
obj/force_globals$(O): force_globals.F90 \ |
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> |
obj/force_globals$(O): ./force_globals.F90 \ |
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obj/$(F_MACH_DEFS) |
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< |
obj/neighborLists$(O): neighborLists.F90 \ |
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> |
obj/neighborLists$(O): ./neighborLists.F90 \ |
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obj/$(F_MACH_DEFS) |
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185 |
< |
obj/calc_sticky_pair$(O): calc_sticky_pair.F90 \ |
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> |
obj/calc_sticky_pair$(O): ./calc_sticky_pair.F90 \ |
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obj/$(F_MACH_DEFS) \ |
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+ |
obj/simulation_module$(O) \ |
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obj/force_globals$(O) |
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< |
obj/calc_gb$(O): calc_gb.F90 \ |
190 |
> |
obj/calc_gb$(O): ./calc_gb.F90 \ |
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obj/$(F_MACH_DEFS) \ |
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+ |
obj/simulation_module$(O) \ |
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obj/force_globals$(O) |
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195 |
< |
obj/atype_module$(O): atype_module.F90 \ |
195 |
> |
obj/atype_module$(O): ./atype_module.F90 \ |
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obj/$(F_MACH_DEFS) \ |
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obj/vector_class$(O) \ |
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obj/calc_sticky_pair$(O) \ |
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obj/calc_gb$(O) |
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201 |
< |
obj/simulation_module$(O): simulation_module.F90 \ |
201 |
> |
obj/simulation_module$(O): ./simulation_module.F90 \ |
202 |
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obj/$(F_MACH_DEFS) \ |
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+ |
obj/vector_class$(O) \ |
204 |
+ |
obj/force_globals$(O) \ |
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obj/atype_module$(O) \ |
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obj/neighborLists$(O) |
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208 |
< |
obj/calc_LJ_FF$(O): calc_LJ_FF.F90 \ |
208 |
> |
obj/calc_LJ_FF$(O): ./calc_LJ_FF.F90 \ |
209 |
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obj/$(F_MACH_DEFS) \ |
210 |
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obj/atype_module$(O) \ |
211 |
+ |
obj/simulation_module$(O) \ |
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obj/vector_class$(O) \ |
213 |
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obj/force_globals$(O) |
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|
215 |
< |
obj/calc_reaction_field$(O): calc_reaction_field.F90 \ |
215 |
> |
obj/calc_reaction_field$(O): ./calc_reaction_field.F90 \ |
216 |
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obj/$(F_MACH_DEFS) \ |
217 |
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obj/vector_class$(O) \ |
218 |
+ |
obj/simulation_module$(O) \ |
219 |
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obj/atype_module$(O) \ |
220 |
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obj/force_globals$(O) |
221 |
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|
222 |
< |
obj/calc_dipole_dipole$(O): calc_dipole_dipole.F90 \ |
222 |
> |
obj/calc_dipole_dipole$(O): ./calc_dipole_dipole.F90 \ |
223 |
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obj/$(F_MACH_DEFS) \ |
224 |
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obj/atype_module$(O) \ |
225 |
+ |
obj/simulation_module$(O) \ |
226 |
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obj/force_globals$(O) \ |
227 |
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obj/vector_class$(O) |
228 |
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|
229 |
< |
obj/do_Forces$(O): do_Forces.F90 \ |
229 |
> |
obj/do_Forces$(O): ./do_Forces.F90 \ |
230 |
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obj/$(F_MACH_DEFS) \ |
231 |
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obj/simulation_module$(O) \ |
232 |
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obj/atype_module$(O) \ |
238 |
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obj/calc_gb$(O) \ |
239 |
|
obj/force_globals$(O) |
240 |
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|
241 |
< |
obj/wrappers$(O): wrappers.F90 \ |
241 |
> |
obj/wrappers$(O): ./wrappers.F90 \ |
242 |
|
obj/$(F_MACH_DEFS) \ |
243 |
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obj/simulation_module$(O) \ |
244 |
|
obj/atype_module$(O) \ |
246 |
|
|
247 |
|
#MPI dependencies: |
248 |
|
|
249 |
< |
MPIobj/$(F_MACH_DEFS): Linux_ifc_machdep.F90 |
249 |
> |
MPIobj/$(F_MACH_DEFS): ./Linux_ifc_machdep.F90 |
250 |
|
|
251 |
< |
MPIobj/vector_class$(O): vector_class.F90 |
251 |
> |
MPIobj/vector_class$(O): ./vector_class.F90 |
252 |
|
|
253 |
< |
MPIobj/mpiSimulation_module$(O): mpiSimulation_module.F90 |
253 |
> |
MPIobj/mpiSimulation_module$(O): ./mpiSimulation_module.F90 |
254 |
|
|
255 |
< |
MPIobj/force_globals$(O): force_globals.F90 \ |
255 |
> |
MPIobj/force_globals$(O): ./force_globals.F90 \ |
256 |
|
MPIobj/mpiSimulation_module$(O) \ |
257 |
|
MPIobj/$(F_MACH_DEFS) |
258 |
|
|
259 |
< |
MPIobj/neighborLists$(O): neighborLists.F90 \ |
259 |
> |
MPIobj/neighborLists$(O): ./neighborLists.F90 \ |
260 |
|
MPIobj/$(F_MACH_DEFS) \ |
261 |
|
MPIobj/mpiSimulation_module$(O) |
262 |
|
|
263 |
< |
MPIobj/calc_sticky_pair$(O): calc_sticky_pair.F90 \ |
263 |
> |
MPIobj/calc_sticky_pair$(O): ./calc_sticky_pair.F90 \ |
264 |
|
MPIobj/$(F_MACH_DEFS) \ |
265 |
+ |
MPIobj/simulation_module$(O) \ |
266 |
|
MPIobj/mpiSimulation_module$(O) \ |
267 |
|
MPIobj/force_globals$(O) |
268 |
|
|
269 |
< |
MPIobj/calc_gb$(O): calc_gb.F90 \ |
269 |
> |
MPIobj/calc_gb$(O): ./calc_gb.F90 \ |
270 |
|
MPIobj/$(F_MACH_DEFS) \ |
271 |
+ |
MPIobj/simulation_module$(O) \ |
272 |
|
MPIobj/mpiSimulation_module$(O) \ |
273 |
|
MPIobj/force_globals$(O) |
274 |
|
|
275 |
< |
MPIobj/atype_module$(O): atype_module.F90 \ |
275 |
> |
MPIobj/atype_module$(O): ./atype_module.F90 \ |
276 |
|
MPIobj/$(F_MACH_DEFS) \ |
277 |
|
MPIobj/vector_class$(O) \ |
278 |
|
MPIobj/calc_sticky_pair$(O) \ |
279 |
|
MPIobj/calc_gb$(O) |
280 |
|
|
281 |
< |
MPIobj/simulation_module$(O): simulation_module.F90 \ |
281 |
> |
MPIobj/simulation_module$(O): ./simulation_module.F90 \ |
282 |
|
MPIobj/$(F_MACH_DEFS) \ |
283 |
+ |
MPIobj/vector_class$(O) \ |
284 |
+ |
MPIobj/force_globals$(O) \ |
285 |
|
MPIobj/mpiSimulation_module$(O) \ |
286 |
|
MPIobj/atype_module$(O) \ |
287 |
|
MPIobj/neighborLists$(O) |
288 |
|
|
289 |
< |
MPIobj/calc_LJ_FF$(O): calc_LJ_FF.F90 \ |
289 |
> |
MPIobj/calc_LJ_FF$(O): ./calc_LJ_FF.F90 \ |
290 |
|
MPIobj/$(F_MACH_DEFS) \ |
291 |
+ |
MPIobj/simulation_module$(O) \ |
292 |
|
MPIobj/mpiSimulation_module$(O) \ |
293 |
|
MPIobj/atype_module$(O) \ |
294 |
|
MPIobj/vector_class$(O) \ |
295 |
|
MPIobj/force_globals$(O) |
296 |
|
|
297 |
< |
MPIobj/calc_reaction_field$(O): calc_reaction_field.F90 \ |
297 |
> |
MPIobj/calc_reaction_field$(O): ./calc_reaction_field.F90 \ |
298 |
|
MPIobj/$(F_MACH_DEFS) \ |
299 |
+ |
MPIobj/simulation_module$(O) \ |
300 |
|
MPIobj/mpiSimulation_module$(O) \ |
301 |
|
MPIobj/vector_class$(O) \ |
302 |
|
MPIobj/atype_module$(O) \ |
303 |
|
MPIobj/force_globals$(O) |
304 |
|
|
305 |
< |
MPIobj/calc_dipole_dipole$(O): calc_dipole_dipole.F90 \ |
305 |
> |
MPIobj/calc_dipole_dipole$(O): ./calc_dipole_dipole.F90 \ |
306 |
|
MPIobj/$(F_MACH_DEFS) \ |
307 |
+ |
MPIobj/simulation_module$(O) \ |
308 |
|
MPIobj/mpiSimulation_module$(O) \ |
309 |
|
MPIobj/atype_module$(O) \ |
310 |
|
MPIobj/force_globals$(O) \ |
311 |
|
MPIobj/vector_class$(O) |
312 |
|
|
313 |
< |
MPIobj/do_Forces$(O): do_Forces.F90 \ |
313 |
> |
MPIobj/do_Forces$(O): ./do_Forces.F90 \ |
314 |
|
MPIobj/$(F_MACH_DEFS) \ |
315 |
|
MPIobj/mpiSimulation_module$(O) \ |
316 |
|
MPIobj/simulation_module$(O) \ |
323 |
|
MPIobj/calc_gb$(O) \ |
324 |
|
MPIobj/force_globals$(O) |
325 |
|
|
326 |
< |
MPIobj/wrappers$(O): wrappers.F90 \ |
326 |
> |
MPIobj/wrappers$(O): ./wrappers.F90 \ |
327 |
|
MPIobj/$(F_MACH_DEFS) \ |
328 |
|
MPIobj/mpiSimulation_module$(O) \ |
329 |
|
MPIobj/simulation_module$(O) \ |