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root/group/trunk/OOPSE/libmdtools/ReadWrite.hpp
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Comparing trunk/OOPSE/libmdtools/ReadWrite.hpp (file contents):
Revision 1074 by tim, Mon Mar 1 20:01:50 2004 UTC vs.
Revision 1118 by tim, Mon Apr 19 03:52:27 2004 UTC

# Line 1 | Line 1
1   #ifndef __READWRITE_H__
2   #define __READWRITE_H__
3 <
3 > #define _LARGEFILE_SOURCE64
4 > #define _FILE_OFFSET_BITS 64
5   #include <iostream>
6   #include <fstream>
7 <
7 > #include <string>
8   #include <string.h>
9   #include <stdio.h>
10   #include <stdlib.h>
# Line 15 | Line 16
16   #include "Atom.hpp"
17   #include "SimInfo.hpp"
18   #include "Thermo.hpp"
19 + #include "StuntDouble.hpp"
20  
21   using namespace std;
22  
21 – class FilePos{
22 –
23 – public:
24 –  FilePos(){
25 –    myPos = NULL;
26 –    next = NULL;
27 –  }
28 –  FilePos( fpos_t* thePos ) {
29 –    myPos = thePos;
30 –    next = NULL;
31 –  }
32 –  ~FilePos(){
33 –    if( next  != NULL ) delete next;
34 –    if( myPos != NULL ) delete myPos;
35 –  }
36 –
37 –  void add( fpos_t *thePos ){
38 –    if( next != NULL )
39 –      next->add( thePos );
40 –    else
41 –      next = new FilePos( thePos );
42 –  }
43 –
44 –  FilePos &operator=(fpos_t *thePos){ myPos = thePos; return *this; }
45 –
46 –  void setPos( fpos_t *thePos ){ myPos = thePos; }
47 –  fpos_t *getPos( void ){ return myPos; }
48 –
49 –  FilePos* getNext( void ) { return next; }
50 – private:
51 –
52 –  fpos_t *myPos;
53 –  FilePos* next;
54 –
55 – };
56 –
23   class DumpWriter{
24  
25   public:
# Line 108 | Line 74 | class InitializeFromFile{ (private)
74    void readInit( SimInfo* the_entry_plug );
75  
76   private:
77 <  char* parseDumpLine(char* line, int atomIndex);
77 >  char* parseDumpLine(char* line, StuntDouble* sd);
78    char* parseCommentLine(char* line, SimInfo* entry_plug);
79    FILE *c_in_file;
80    char c_in_name[500];
# Line 127 | Line 93 | class DumpReader{ (private)
93    void getNextFrame() {}
94    void readFrame(SimInfo* the_simnfo, int whichFrame);
95  
96 + #ifdef IS_MPI
97 +  void anonymousNodeDie( void );
98 +  void nodeZeroError( void );
99 + #endif
100   private:
101  
102    void readSet( int whichFrame );
103 <  char* parseDumpLine(char* line, int atomIndex);
104 <  char* parseCommentLine(char* line, double &time, double boxMat[9] );
103 >  char* parseDumpLine(char* readLine, StuntDouble* sd);
104 >  char* parseCommentLine(char* readLine, SimInfo* entry_plug);
105    FILE *inFile;
106 <  char inName[500];
106 >  string inFileName;
107    bool isScanned;
138 –  int nFrames;
108  
109 <  FilePos** frameStart;
141 <  FilePos* headFP;
142 <
109 >  vector<fpos_t*> framePos;
110    SimInfo *simnfo;
111   };
112  

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