ViewVC Help
View File | Revision Log | Show Annotations | View Changeset | Root Listing
root/group/trunk/OOPSE/libmdtools/RigidBody.hpp
Revision: 1118
Committed: Mon Apr 19 03:52:27 2004 UTC (20 years, 2 months ago) by tim
File size: 2895 byte(s)
Log Message:
new implement of quickLate using visitor and composite pattern

File Contents

# Content
1 #ifndef __RIGIDBODY_HPP__
2 #define __RIGIDBODY_HPP__
3
4 #include <vector>
5 //#include "Atom.hpp"
6 //#include "AtomStamp.hpp"
7 #include "RigidBodyStamp.hpp"
8 #include "StuntDouble.hpp"
9 using namespace std;
10
11 class Atom;
12 class AtomStamp;
13
14 typedef struct {
15 double vec[3];
16 double& operator[](int index) {return vec[index];}
17 } vec3;
18
19 typedef struct {
20 double mat[3][3];
21 double* operator[](int index) {return mat[index];}
22 } mat3x3;
23
24 class RigidBody : public StuntDouble {
25
26 public:
27
28 RigidBody();
29 virtual ~RigidBody();
30
31 void addAtom(Atom* at, AtomStamp* ats);
32
33 void getPos( double theP[3] );
34 void setPos( double theP[3] );
35
36 void getVel( double theV[3] );
37 void setVel( double theV[3] );
38
39 void getFrc( double theF[3] );
40 void addFrc( double theF[3] );
41 void zeroForces();
42
43 virtual bool isLinear() {return is_linear;}
44 virtual int linearAxis() {return linear_axis;}
45
46 double getMass( void ) { return mass; }
47
48 void printAmatIndex( void );
49 void setEuler( double phi, double theta, double psi );
50 void getQ( double the_q[4] ); // get the quanternions
51 void setQ( double the_q[4] );
52
53 void getA( double the_A[3][3] ); // get the full rotation matrix
54 void setA( double the_A[3][3] );
55
56 void getJ( double theJ[3] );
57 void setJ( double theJ[3] );
58
59 virtual void setType(char* type) {strcpy(rbName, type);}
60 virtual char* getType() { return rbName;}
61
62 void getTrq( double theT[3] );
63 void addTrq( double theT[3] );
64
65 void getI( double the_I[3][3] );
66 void lab2Body( double r[3] );
67 void body2Lab( double r[3] );
68
69 void calcRefCoords( void );
70 void doEulerToRotMat(vec3 &euler, mat3x3 &myA );
71 void calcForcesAndTorques( void );
72 void updateAtoms( void );
73
74 //void yourAtomsHaveMoved( void );
75
76 // Four functions added for derivatives with respect to Euler Angles:
77 // (Needed for minimization routines):
78
79 void getGrad(double gradient[6] );
80 void getEulerAngles( double myEuler[3] );
81
82 double max(double x, double y);
83 double min(double x, double y);
84
85
86 // utility routines
87
88 void findCOM( void );
89
90 virtual void accept(BaseVisitor* v);
91
92 vector<Atom*> getAtoms() { return myAtoms;}
93
94 protected:
95
96 double mass; // the total mass
97 double pos[3]; // the position array (center of mass)
98 double vel[3]; // the velocity array (center of mass)
99 double frc[3]; // the force array (center of mass)
100 double trq[3]; // the torque vector ( space fixed )
101 double ji[3]; // the angular momentum vector (body fixed)
102 double A[3][3]; // the rotation matrix
103 double I[3][3]; // the inertial tensor (body fixed)
104 double sU[3][3]; // the standard unit vectors (body fixed)
105
106 bool is_linear;
107 int linear_axis;
108 const static double momIntTol = 1e-6;
109
110 vector<Atom*> myAtoms; // the vector of atoms
111 vector<vec3> refCoords;
112 vector<mat3x3> refOrients;
113
114 char rbName[100]; //it will eventually be converted into string
115 };
116
117 #endif