--- trunk/OOPSE/libmdtools/SimInfo.cpp 2004/05/11 20:33:41 1157 +++ trunk/OOPSE/libmdtools/SimInfo.cpp 2004/05/11 21:14:26 1158 @@ -579,6 +579,7 @@ void getFortranGroupArray(SimInfo* info, vector::iterator iterAtom; int atomIndex; + double totalMass; mfact.clear(); groupList.clear(); @@ -615,17 +616,21 @@ void getFortranGroupArray(SimInfo* info, vectorgetMass(); for(cutoffAtom = myCutoffGroup->beginAtom(iterAtom); cutoffAtom != NULL; - cutoffAtom = myCutoffGroup->beginAtom(iterAtom)){ + cutoffAtom = myCutoffGroup->nextAtom(iterAtom)){ + mfact.push_back(cutoffAtom->getMass()/totalMass); groupList.push_back(cutoffAtom->getIndex() + 1); } groupStart.push_back(curIndex); curIndex += myCutoffGroup->getNumAtom(); - } - - } + }//end for(myCutoffGroup =myMols[i].beginCutoffGroup(iterCutoff)) + + }//end for(int i = 0; i < numMol; i++) + ngroup = groupStart.size(); }