# | Line 335 | Line 335 | void SimSetup::createSim( void ){ | |
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335 | ||
336 | ||
337 | if( simnfo->n_SRI ){ | |
338 | + | |
339 | + | std::cerr << "n_SRI = " << simnfo->n_SRI << "\n"; |
340 | + | |
341 | Exclude::createArray(simnfo->n_SRI); | |
342 | the_excludes = new Exclude*[simnfo->n_SRI]; | |
343 | + | for( int ex=0; ex<simnfo->n_SRI; ex++) the_excludes[ex] = new Exclude(ex); |
344 | simnfo->globalExcludes = new int; | |
345 | simnfo->n_exclude = tot_SRI; | |
346 | } | |
# | Line 354 | Line 358 | void SimSetup::createSim( void ){ | |
358 | // set the arrays into the SimInfo object | |
359 | ||
360 | simnfo->atoms = the_atoms; | |
361 | + | simnfo->molecules = the_molecules; |
362 | simnfo->nGlobalExcludes = 0; | |
363 | simnfo->excludes = the_excludes; | |
364 |
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