--- trunk/OOPSE/libmdtools/SimSetup.cpp	2003/10/29 17:55:28	841
+++ trunk/OOPSE/libmdtools/SimSetup.cpp	2003/11/06 22:01:37	855
@@ -699,6 +699,11 @@ void SimSetup::gatherInfo(void){
     
     if (globals->haveTempSet())
       info[i].setTemp = globals->getTempSet();
+
+    // check for the extended State init
+
+    info[i].useInitXSstate = globals->getUseInitXSstate();
+    info[i].orthoTolerance = globals->getOrthoBoxTolerance();
     
   }
   
@@ -853,6 +858,9 @@ void SimSetup::finalInfoCheck(void){
         info[i].setDefaultEcr(theEcr, theEst);
       }
     }
+
+    if( !initSuspend )
+      info[i].checkCutOffs();
   }
 
 #ifdef IS_MPI
@@ -1414,6 +1422,7 @@ void SimSetup::makeIntegrator(void){
 
         if (globals->haveTauThermostat())
           myNPTf->setTauThermostat(globals->getTauThermostat());
+
         else{
           sprintf(painCave.errMsg,
                   "SimSetup error: If you use an NPT\n"
@@ -1424,6 +1433,7 @@ void SimSetup::makeIntegrator(void){
 
         if (globals->haveTauBarostat())
           myNPTf->setTauBarostat(globals->getTauBarostat());
+
         else{
           sprintf(painCave.errMsg,
                   "SimSetup error: If you use an NPT\n"