--- trunk/OOPSE/libmdtools/mpiSimulation.cpp 2003/03/27 19:21:42 422 +++ trunk/OOPSE/libmdtools/mpiSimulation.cpp 2003/03/28 19:30:59 434 @@ -1,5 +1,5 @@ #ifdef IS_MPI - +#include #include #include #include @@ -85,7 +85,7 @@ int* mpiSimulation::divideLabor( void ){ myRandom = new randomSPRNG( baseSeed ); - a = (double)mpiPlug->nMolGlobal / (double)mpiPlug->nAtomsGlobal; + a = 3.0 * (double)mpiPlug->nMolGlobal / (double)mpiPlug->nAtomsGlobal; // Initialize things that we'll send out later: for (i = 0; i < mpiPlug->numberProcessors; i++ ) { @@ -133,28 +133,8 @@ int* mpiSimulation::divideLabor( void ){ // How many atoms does this processor have? old_atoms = AtomsPerProc[which_proc]; - - // If the processor already had too many atoms, just skip this - // processor and try again. - - if (old_atoms >= nTarget) continue; - add_atoms = compStamps[MolComponentType[i]]->getNAtoms(); new_atoms = old_atoms + add_atoms; - - // If we can add this molecule to this processor without sending - // it above nTarget, then go ahead and do it: - - if (new_atoms <= nTarget) { - MolToProcMap[i] = which_proc; - AtomsPerProc[which_proc] += add_atoms; - for (j = 0 ; j < add_atoms; j++ ) { - AtomToProcMap[atomIndex] = which_proc; - atomIndex++; - } - done = 1; - continue; - } // If we've been through this loop too many times, we need // to just give up and assign the molecule to this processor @@ -178,19 +158,34 @@ int* mpiSimulation::divideLabor( void ){ done = 1; continue; } + + // If we can add this molecule to this processor without sending + // it above nTarget, then go ahead and do it: + + if (new_atoms <= nTarget) { + MolToProcMap[i] = which_proc; + AtomsPerProc[which_proc] += add_atoms; + for (j = 0 ; j < add_atoms; j++ ) { + AtomToProcMap[atomIndex] = which_proc; + atomIndex++; + } + done = 1; + continue; + } - // The only situation left is where old_atoms < nTarget, but - // new_atoms > nTarget. We want to accept this with some - // probability that dies off the farther we are from nTarget + // The only situation left is when new_atoms > nTarget. We + // want to accept this with some probability that dies off the + // farther we are from nTarget + // roughly: x = new_atoms - nTarget // Pacc(x) = exp(- a * x) - // where a = 1 / (average atoms per molecule) + // where a = penalty / (average atoms per molecule) x = (double) (new_atoms - nTarget); y = myRandom->getRandom(); - - if (exp(- a * x) > y) { + + if (y < exp(- a * x)) { MolToProcMap[i] = which_proc; AtomsPerProc[which_proc] += add_atoms; for (j = 0 ; j < add_atoms; j++ ) { @@ -234,6 +229,8 @@ int* mpiSimulation::divideLabor( void ){ MPI::COMM_WORLD.Bcast(AtomsPerProc, mpiPlug->numberProcessors, MPI_INT, 0); + + } @@ -289,7 +286,7 @@ int* mpiSimulation::divideLabor( void ){ local_index++; } } - + return globalIndex; }