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#ifndef __PAIRCORRTYPE_H__ |
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#define __PAIRCORRTYPE_H__ |
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#include "CorrWrap.hpp" |
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#define MAX_NAME_LENGTH 50 |
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#define IS_A 0 |
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#define IS_B 1 |
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class atomName{ |
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public: |
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char[MAX_NAME_LENGTH] name; |
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}; |
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class PairCorrType { |
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public: |
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PairCorrType( char* key1, char* key2, int theNatoms, int theNbins ); |
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virtual ~PairCorrType(); |
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bool matchI( int i ); |
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bool matchJ( int j ); |
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void initCorr( double theLengthScale, atomName* theNames ); |
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void setFrameVolume( double theVolume ); |
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virtual void correlate( double[3] Rij, double dist, |
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double[3] uHatI, double[3] uHatJ ) = 0; |
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virtual void accumulateFrame( void ) = 0; |
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virtual void writeCorr( char* outPrefix ) = 0; |
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virtual void getCorr( CorrWrap* myCorrWrap ) = 0; |
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protected: |
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int nBins; |
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int nAtoms; |
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int nAtoms1; |
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int nAtoms2; |
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bool isSelfSelf; |
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double lengthScale; |
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double volume; |
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double pairDensity; |
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double pairConstant; |
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int identI; |
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bool* isAtom1; |
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bool* isAtom2; |
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bool* jArray; |
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bool correlateMe; |
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bool isInitialized; |
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char atom1[MAX_NAME_LENGTH]; |
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char atom2[MAX_NAME_LENGTH]; |
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char corrType[MAX_NAME_LENGTH]; |
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}; |
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class GofR : public PairCorrType{ |
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GofR( char* key1, char* key2, int theNatoms, intNbins ); |
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virtual ~GofR(); |
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virtual void correlate( double[3] Rij, double dist, |
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double[3] uHatI, double[3] uHatJ ); |
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virtual void accumulateFrame( void ); |
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virtual void writeCorr( char* outPrefix ); |
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protected: |
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int *currHist; |
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double *currGofR; |
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double *avgGofR; |
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int nFrames; |
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}; |
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#endif // __PAIRCORRTYPE_H__ |