10 |
|
|
11 |
|
class atomName{ |
12 |
|
public: |
13 |
< |
char[MAX_NAME_LENGTH] name; |
13 |
> |
char name[MAX_NAME_LENGTH]; |
14 |
|
}; |
15 |
|
|
16 |
|
class PairCorrType { |
28 |
|
|
29 |
|
void setFrameVolume( double theVolume ); |
30 |
|
|
31 |
< |
virtual void correlate( double[3] Rij, double dist, |
32 |
< |
double[3] uHatI, double[3] uHatJ ) = 0; |
31 |
> |
virtual void correlate( double Rij[3], double dist, |
32 |
> |
double uHatI[3], double uHatJ[3] ) = 0; |
33 |
|
|
34 |
|
virtual void accumulateFrame( void ) = 0; |
35 |
|
|
51 |
|
double volume; |
52 |
|
double pairDensity; |
53 |
|
double pairConstant; |
54 |
+ |
double delR; |
55 |
|
|
56 |
|
int identI; |
57 |
|
|
71 |
|
|
72 |
|
class GofR : public PairCorrType{ |
73 |
|
|
74 |
< |
GofR( char* key1, char* key2, int theNatoms, intNbins ); |
74 |
> |
public: |
75 |
> |
GofR( char* key1, char* key2, int theNatoms, int theNbins ); |
76 |
|
virtual ~GofR(); |
77 |
|
|
78 |
< |
virtual void correlate( double[3] Rij, double dist, |
79 |
< |
double[3] uHatI, double[3] uHatJ ); |
78 |
> |
virtual void correlate( double Rij[3], double dist, |
79 |
> |
double uHatI[3], double uHatJ[3] ); |
80 |
|
|
81 |
|
virtual void accumulateFrame( void ); |
82 |
|
|
83 |
|
virtual void writeCorr( char* outPrefix ); |
84 |
|
|
85 |
+ |
virtual void getCorr( CorrWrap* myCorrWrap ){} |
86 |
+ |
|
87 |
|
protected: |
88 |
|
|
89 |
|
int *currHist; |
95 |
|
|
96 |
|
}; |
97 |
|
|
98 |
+ |
class GofRtheta : public PairCorrType{ |
99 |
+ |
|
100 |
+ |
public: |
101 |
+ |
GofRtheta( char* key1, char* key2, int theNatoms, int theNbins ); |
102 |
+ |
virtual ~GofRtheta(); |
103 |
+ |
|
104 |
+ |
virtual void correlate( double Rij[3], double dist, |
105 |
+ |
double uHatI[3], double uHatJ[3] ); |
106 |
+ |
|
107 |
+ |
virtual void accumulateFrame( void ); |
108 |
+ |
|
109 |
+ |
virtual void writeCorr( char* outPrefix ); |
110 |
+ |
|
111 |
+ |
virtual void getCorr( CorrWrap* myCorrWrap ){} |
112 |
+ |
|
113 |
+ |
protected: |
114 |
+ |
|
115 |
+ |
int **currCosHist; |
116 |
+ |
double **currGofRtheta; |
117 |
+ |
double **avgGofRtheta; |
118 |
+ |
|
119 |
+ |
int nFrames; |
120 |
+ |
|
121 |
+ |
|
122 |
+ |
}; |
123 |
+ |
|
124 |
|
#endif // __PAIRCORRTYPE_H__ |