--- trunk/OOPSE/staticProps/staticProps.cpp	2003/10/10 17:10:22	803
+++ trunk/OOPSE/staticProps/staticProps.cpp	2003/10/17 21:19:07	810
@@ -39,6 +39,10 @@ int main(int argC,char* argV[]){
   bool haveMaxLength;
   double maxLength;
   
+  bool separateOut;
+  bool havePairCorrs;
+  bool haveStaticCorrs;
+
   int nBins;
 
   vector<PairCorrList> theList;
@@ -59,8 +63,7 @@ int main(int argC,char* argV[]){
   
   // first things first, all of the initializations
 
-  printf("Initializing stuff ....\n");
-  fflush(sdtout);
+  fflush(stdout);
   srand48( 1337 );          // the random number generator.
   initSimError();           // the error handler
 
@@ -72,11 +75,15 @@ int main(int argC,char* argV[]){
  
   havePrefix = false;
   haveMaxLength = false;
+
+  haveStaticCorrs = false;
+  havePairCorrs = false;
+  separateOut = false;
   
   maxLength = 1.0;
   nBins = 100;
 
-  programName = argv[0]; /*save the program name in case we need it*/
+  programName = argV[0]; /*save the program name in case we need it*/
 
   for( i = 1; i < argC; i++){
     
@@ -114,6 +121,7 @@ int main(int argC,char* argV[]){
 
 	  pairType = gofr;
 	  theList.push_back(PairCorrList( pairType, pair1, pair2 ));
+	  havePairCorrs = true;
 	}
 
 	else if( !strcmp( argV[i], "--version") ){
@@ -242,7 +250,13 @@ int main(int argC,char* argV[]){
 	    }
 	    
 	    done = true;
+
+	    break;
+
+	  case 's':
+	    // -s turn on separate output files
 
+	    separateOut = true;
 	    break;
 
 	  case 'n':
@@ -394,7 +408,8 @@ int main(int argC,char* argV[]){
   theCorrs.setNbins( nBins );
   theCorrs.setFrames( infoArray, nFrames, reader );
   theCorrs.setPairCorrList( theList );
-  theCorrs.initCorrelations( outPrefix );
+  theCorrs.initCorrelations( outPrefix, separateOut, havePairCorrs,
+			     haveStaticCorrs );
 
   printf("done\n");
   fflush(stdout);
@@ -429,7 +444,7 @@ void usage(){
 		"   long:\n"
 		"   -----\n"
 		"   --gofr <atom1> <atom2>    g(r) for atom1 and atom2\n"
-		"                                *note: \"_ALL_\" matches all atoms/n"
+		"                                *note: \"_ALL_\" matches all atoms\n"
 		"   --version                 displays the version number\n"
 		"   --help                    displays this help message.\n"