Fixed bugs. Single version now runs w/o segfault. Still a conservation of energy bug. do_Forces.F90: Fixed pot not being passed to do_pair. neighborLists.F90: Fixed bugs in checkNeighborLists atype_module.F90: Fixed bug with allocating atypes on each new_atype call.Now checks to see if atypes is null, then calles initialize(16). vector_class.F90: Fixed some bugs with how MatchList was being allocated.
some initial bug fixes
last little changes before compiling and debuging
shed implementation of the Fortran interfaces.
mostly compiles. interface twixt c and fortran is broken. (c needs to be brought up to date with fortran.)
finished adding the ghostBend into the TraPPE_Ex force Field
Added ghostBend into SimSetup. only need to add awareness to TraPPE_Ex
Made changes to lj_FF.cpp to pass stress tensor.
working on getting this distribution working
added libmdCode and a couple help scripts
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