| 49 |
|
|
| 50 |
|
# fftw library and include files |
| 51 |
|
FFTWINC = -I/usr/local/include |
| 52 |
< |
FFTWLIB = -L/usr/local/lib/ -lfftw3 |
| 52 |
> |
FFTWLIB = -Wl,-R/usr/local/lib -L/usr/local/lib/ -lfftw3 |
| 53 |
|
|
| 54 |
+ |
# cgicc library and include files |
| 55 |
+ |
CGICCINC = -I/usr/local/include |
| 56 |
+ |
CGICCLIB = -Wl,-R/usr/local/lib -L/usr/local/lib/ -lcgicc |
| 57 |
+ |
|
| 58 |
|
# CPP flags |
| 59 |
|
CPPFLAGS= |
| 60 |
|
|
| 83 |
|
|
| 84 |
|
SHAPER=shaper$(EXE) |
| 85 |
|
VISUALIZER=visualizer$(EXE) |
| 86 |
< |
LDADD=-lz |
| 86 |
> |
LDADD= |
| 87 |
|
|
| 88 |
|
# Then do the compile rules: |
| 89 |
|
|
| 106 |
|
$(DIR)/seminaive.c \ |
| 107 |
|
$(DIR)/FST_semi_memo.c |
| 108 |
|
|
| 109 |
+ |
SHAPERCGI_C_FILES = \ |
| 110 |
+ |
$(DIR)/MatVec3.c \ |
| 111 |
+ |
$(DIR)/cospmls.c \ |
| 112 |
+ |
$(DIR)/makeweights.c \ |
| 113 |
+ |
$(DIR)/naive_synthesis.c \ |
| 114 |
+ |
$(DIR)/pmls.c \ |
| 115 |
+ |
$(DIR)/primitive.c \ |
| 116 |
+ |
$(DIR)/seminaive.c \ |
| 117 |
+ |
$(DIR)/FST_semi_memo.c |
| 118 |
+ |
|
| 119 |
|
VISUALIZER_C_FILES = \ |
| 120 |
|
$(DIR)/visualizerCmd.c |
| 121 |
|
|
| 127 |
|
$(DIR)/GridBuilder.cpp \ |
| 128 |
|
$(DIR)/SphereHarm.cpp |
| 129 |
|
|
| 130 |
+ |
SHAPERCGI_CXX_FILES = \ |
| 131 |
+ |
$(DIR)/shaperCGI.cpp \ |
| 132 |
+ |
$(DIR)/PDBReader.cpp \ |
| 133 |
+ |
$(DIR)/RigidBody.cpp \ |
| 134 |
+ |
$(DIR)/VDWAtom.cpp \ |
| 135 |
+ |
$(DIR)/GridBuilder.cpp \ |
| 136 |
+ |
$(DIR)/SphereHarm.cpp |
| 137 |
+ |
|
| 138 |
|
VISUALIZER_CXX_FILES = \ |
| 139 |
|
$(DIR)/SHFunc.cpp \ |
| 140 |
|
$(DIR)/SHAPE.cpp \ |
| 151 |
|
SHAPER_C_SRCS := $(SHAPER_C_FILES) |
| 152 |
|
SHAPER_CXX_SRCS := $(SHAPER_CXX_FILES) |
| 153 |
|
SHAPER_SRCS := $(SHAPER_C_SRCS) $(SHAPER_CXX_SRCS) |
| 154 |
+ |
SHAPERCGI_C_SRCS := $(SHAPERCGI_C_FILES) |
| 155 |
+ |
SHAPERCGI_CXX_SRCS := $(SHAPERCGI_CXX_FILES) |
| 156 |
+ |
SHAPERCGI_SRCS := $(SHAPERCGI_C_SRCS) $(SHAPERCGI_CXX_SRCS) |
| 157 |
|
VISUALIZER_C_SRCS := $(VISUALIZER_C_FILES) |
| 158 |
|
VISUALIZER_CXX_SRCS := $(VISUALIZER_CXX_FILES) |
| 159 |
|
VISUALIZER_SRCS := $(VISUALIZER_C_SRCS) $(VISUALIZER_CXX_SRCS) |
| 162 |
|
SHAPER_C_OBJS := $(SHAPER_C_FILES:.c=.o) |
| 163 |
|
SHAPER_CXX_OBJS := $(SHAPER_CXX_FILES:.cpp=.o) |
| 164 |
|
SHAPER_OBJS := $(SHAPER_C_OBJS) $(SHAPER_CXX_OBJS) |
| 165 |
+ |
SHAPERCGI_C_OBJS := $(SHAPERCGI_C_FILES:.c=.o) |
| 166 |
+ |
SHAPERCGI_CXX_OBJS := $(SHAPERCGI_CXX_FILES:.cpp=.o) |
| 167 |
+ |
SHAPERCGI_OBJS := $(SHAPERCGI_C_OBJS) $(SHAPERCGI_CXX_OBJS) |
| 168 |
|
VISUALIZER_C_OBJS := $(VISUALIZER_C_FILES:.c=.o) |
| 169 |
|
VISUALIZER_CXX_OBJS := $(VISUALIZER_CXX_FILES:.cpp=.o) |
| 170 |
|
VISUALIZER_OBJS := $(VISUALIZER_C_OBJS) $(VISUALIZER_CXX_OBJS) |
| 173 |
|
|
| 174 |
|
# Possible make targets: |
| 175 |
|
|
| 176 |
< |
all: shaper visualizer |
| 176 |
> |
all: shaper visualizer shaperCGI |
| 177 |
|
|
| 178 |
|
shaper$(EXE) : $(SHAPER_OBJS) |
| 179 |
|
$(CXX) $(CFLAGS) $(SHAPER_OBJS) -o $@ $(LDFLAGS) $(LDADD) $(FFTWLIB) |
| 180 |
|
|
| 181 |
+ |
shaperCGI$(EXE) : $(SHAPERCGI_OBJS) |
| 182 |
+ |
$(CXX) $(CFLAGS) $(SHAPERCGI_OBJS) -o $@ $(LDFLAGS) $(LDADD) $(FFTWLIB) $(CGICCLIB) |
| 183 |
+ |
|
| 184 |
|
visualizer$(EXE) : $(VISUALIZER_OBJS) |
| 185 |
|
$(CXX) $(CFLAGS) $(VISUALIZER_OBJS) -o $@ $(LDFLAGS) $(LDADD) |
| 186 |
|
|
| 187 |
< |
install : $(SHAPER) $(VISUALIZER) |
| 187 |
> |
install : $(SHAPER) $(VISUALIZER) $(SHAPERCGI) |
| 188 |
|
$(MKINSTALLDIRS) $(SHAPES_HOME)/bin |
| 189 |
|
$(INSTALL_PROGRAM) -s $(SHAPER) $(SHAPES_HOME)/bin/$(SHAPER) |
| 190 |
+ |
$(INSTALL_PROGRAM) -s $(SHAPERCGI) $(SHAPES_HOME)/bin/$(SHAPERCGI) |
| 191 |
|
$(INSTALL_PROGRAM) -s $(VISUALIZER) $(SHAPES_HOME)/bin/$(VISUALIZER) |
| 192 |
|
$(MKINSTALLDIRS) $(VDW_PARAM_DIR) |
| 193 |
|
for i in $(VDW_FILES); do \ |
| 215 |
|
Make.dep : |
| 216 |
|
echo "Only C dependencies are made automagically!" |
| 217 |
|
echo "# DO NOT DELETE THIS LINE - used by make depend" > Make.dep |
| 218 |
< |
$(CC) $(DEPFLAGS) -MM $(SHAPER_C_SRCS) $(VISUALIZER_C_SRCS) \ |
| 218 |
> |
$(CC) $(DEPFLAGS) -MM $(SHAPER_C_SRCS) $(VISUALIZER_C_SRCS) $(SHAPERCGI_C_SRCS) \ |
| 219 |
|
| sed 's/\.o:/\$$(O)\ :/g' > Make.temp |
| 220 |
< |
$(CXX) $(DEPFLAGS) -MM $(SHAPER_CXX_SRCS) $(VISUALIZER_CXX_SRCS) \ |
| 220 |
> |
$(CXX) $(DEPFLAGS) -MM $(SHAPER_CXX_SRCS) $(VISUALIZER_CXX_SRCS) $(SHAPERCGI_CXX_SRCS) \ |
| 221 |
|
| sed 's/\.o:/\$$(O)\ :/g' >> Make.temp |
| 222 |
|
cat Make.temp | sed 's/^[a-zA-Z0-9]/obj\/&/g' >> Make.dep |
| 223 |
|
$(RM) Make.temp |
