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root/group/trunk/SHAPES/amber99.vdw
Revision: 1244
Committed: Fri Jun 4 16:21:23 2004 UTC (20 years, 1 month ago) by gezelter
File size: 2474 byte(s)
Log Message:
Migrated vdw files from OOPSE

File Contents

# User Rev Content
1 gezelter 1244 #############################################################
2     #
3     # SHAPE potential AtomType file using Amber99 parameters
4     #
5     # Arithmetic addition of Rvdw/2 values to make Rvdw
6     #
7     # Geometric mean for epsilons
8     #
9     # V = Eps [ (Rvdw/r)^12 - 2 (Rvdw/r)^6 ]
10     #
11     # Atype Mass Rvdw/2 Eps
12     ###################################################
13     C 12.01 1.9080 0.0860
14     CA 12.01 1.9080 0.0860
15     CB 12.01 1.9080 0.0860
16     CC 12.01 1.9080 0.0860
17     CD 12.01 1.9080 0.0860
18     CK 12.01 1.9080 0.0860
19     CM 12.01 1.9080 0.0860
20     CN 12.01 1.9080 0.0860
21     CQ 12.01 1.9080 0.0860
22     CR 12.01 1.9080 0.0860
23     CT 12.01 1.9080 0.1094
24     CV 12.01 1.9080 0.0860
25     CW 12.01 1.9080 0.0860
26     C* 12.01 1.9080 0.0860
27     CY 12.01 1.9080 0.0860
28     CZ 12.01 1.9080 0.0860
29     C0 40.08 1.7131 0.459789
30     H 1.008 0.6000 0.0157
31     HC 1.008 1.4870 0.0157
32     H1 1.008 1.3870 0.0157
33     H2 1.008 1.2870 0.0157
34     H3 1.008 1.1870 0.0157
35     HA 1.008 1.4590 0.0150
36     H4 1.008 1.4090 0.0150
37     H5 1.008 1.3590 0.0150
38     HO 1.008 0.0000 0.0000
39     HS 1.008 0.6000 0.0157
40     HW 1.008 0.0000 0.0000
41     HP 1.008 1.1000 0.0157
42     HZ 1.008 1.4590 0.0150
43     F 19.00 1.75 0.061
44     Cl 35.45 1.948 0.265
45     Br 79.90 2.22 0.320
46     I 126.9 2.35 0.40
47     IM 35.45 2.47 0.1
48     IB 131.0 5.0 0.1
49     MG 24.305 0.7926 0.8947
50     N 14.01 1.8240 0.1700
51     NA 14.01 1.8240 0.1700
52     NB 14.01 1.8240 0.1700
53     NC 14.01 1.8240 0.1700
54     N2 14.01 1.8240 0.1700
55     N3 14.01 1.8240 0.1700
56     NT 14.01 1.8240 0.1700
57     N* 14.01 1.8240 0.1700
58     NY 14.01 1.8240 0.1700
59     O 16.00 1.6612 0.2100
60     O2 16.00 1.6612 0.2100
61     OW 16.00 1.7683 0.1520
62     OH 16.00 1.7210 0.2104
63     OS 16.00 1.6837 0.1700
64     P 30.97 2.1000 0.2000
65     S 32.06 2.0000 0.2500
66     SH 32.06 2.0000 0.2500
67     CU 63.55 1.2 0.05
68     Li 6.94 1.1370 0.0183
69     IP 22.99 1.8680 0.00277
70     Na 22.99 1.8680 0.00277
71     K 39.10 2.6580 0.000328
72     Rb 85.47 2.9560 0.00017
73     Cs 132.91 3.3950 0.0000806
74     Zn 65.4 1.10 0.0125
75     LP 3.00 0.00 0.0000