ViewVC Help
View File | Revision Log | Show Annotations | View Changeset | Root Listing
root/group/trunk/chrisDissertation/Ice.tex
Revision: 3016
Committed: Thu Sep 21 23:21:37 2006 UTC (17 years, 9 months ago) by chrisfen
Content type: application/x-tex
File size: 30064 byte(s)
Log Message:
done accept for the abstract and SHAMS section

File Contents

# Content
1 \chapter{\label{chap:ice}PHASE BEHAVIOR OF WATER IN COMPUTER \\ SIMULATIONS}
2
3 As discussed in the previous chapter, water has proven to be a
4 challenging substance to depict in simulations, and a variety of
5 models have been developed to describe its behavior under varying
6 simulation
7 conditions.\cite{Stillinger74,Rahman75,Berendsen81,Jorgensen83,Bratko85,Berendsen87,Caldwell95,Liu96,vanderSpoel98,Urbic00,Mahoney00,Fennell04}
8 These models have been used to investigate important physical
9 phenomena like phase transitions and the hydrophobic
10 effect.\cite{Yamada02,Marrink94,Gallagher03} With the choice of models
11 available, it is only natural to compare them under interesting
12 thermodynamic conditions in an attempt to clarify the limitations of
13 each.\cite{Jorgensen83,Jorgensen98b,Baez94,Mahoney01} Two important
14 property to quantify are the Gibbs and Helmholtz free energies,
15 particularly for the solid forms of water, as these predict the
16 thermodynamic stability of the various phases. Water has a
17 particularly rich phase diagram and takes on a number of different and
18 stable crystalline structures as the temperature and pressure are
19 varied. This complexity makes it a challenging task to investigate the
20 entire free energy landscape.\cite{Sanz04} Ideally, research is
21 focused on the phases having the lowest free energy at a given state
22 point, because these phases will dictate the relevant transition
23 temperatures and pressures for the model.
24
25 The high-pressure phases of water (ice II-ice X as well as ice XII)
26 have been studied extensively both experimentally and
27 computationally. In this chapter, standard reference state methods
28 were applied in the {\it low} pressure regime to evaluate the free
29 energies for a few known crystalline water polymorphs that might be
30 stable at these pressures. This work is unique in the fact that one of
31 the crystal lattices was arrived at through crystallization of a
32 computationally efficient water model under constant pressure and
33 temperature conditions.
34
35 While performing a series of melting simulations on an early iteration
36 of SSD/E, we observed several recrystallization events at a constant
37 pressure of 1 atm. After melting from ice I$_\textrm{h}$ at 235~K, two
38 of five systems recrystallized near 245~K. Crystallization events are
39 interesting in and of themselves;\cite{Matsumoto02,Yamada02} however,
40 the crystal structure extracted from these systems is different from
41 any previously observed ice polymorphs in experiment or
42 simulation.\cite{Fennell04} We have named this structure Ice-{\it i}
43 to indicate its origin in computational simulation. The unit cell of
44 Ice-$i$ and an axially elongated variant named Ice-$i^\prime$ both
45 consist of eight water molecules that stack in rows of interlocking
46 water tetramers as illustrated in figure \ref{fig:iceiCell}A,B. These
47 tetramers form a crystal structure similar in appearance to a recent
48 two-dimensional surface tessellation simulated on silica.\cite{Yang04}
49 As expected in an ice crystal constructed of water tetramers, the
50 hydrogen bonds are not as linear as those observed in ice
51 I$_\textrm{h}$; however, the interlocking of these subunits appears to
52 provide significant stabilization to the overall crystal. The
53 arrangement of these tetramers results in open octagonal cavities that
54 are typically greater than 6.3~\AA\ in diameter (see figure
55 \ref{fig:protOrder}). This open structure leads to crystals that are
56 typically 0.07~g/cm$^3$ less dense than ice I$_\textrm{h}$.
57
58 \begin{figure}
59 \includegraphics[width=\linewidth]{./figures/unitCell.pdf}
60 \caption{Unit cells for (A) Ice-{\it i} and (B) Ice-$i^\prime$, the
61 elongated variant of Ice-{\it i}. For Ice-{\it i}, the $a$ to $c$
62 relation is given by $a = 2.1214c$, while for Ice-$i^\prime$, $a =
63 1.7850c$.}
64 \label{fig:iceiCell}
65 \end{figure}
66
67 \begin{figure}
68 \centering
69 \includegraphics[width=3.5in]{./figures/orderedIcei.pdf}
70 \caption{Image of a proton ordered crystal of Ice-{\it i} looking
71 down the (001) crystal face. The rows of water tetramers surrounded by
72 octagonal pores leads to a crystal structure that is significantly
73 less dense than ice I$_\textrm{h}$.}
74 \label{fig:protOrder}
75 \end{figure}
76
77 Results from our initial studies indicated that Ice-{\it i} is the
78 minimum energy crystal structure for the single point water models
79 investigated (for discussions on these single point dipole models, see
80 the previous work and related
81 articles\cite{Fennell04,Liu96,Bratko85}). These earlier results only
82 considered energetic stabilization and neglected entropic
83 contributions to the overall free energy. To address this issue, we
84 have calculated the absolute free energy of this crystal using
85 thermodynamic integration and compared to the free energies of ice
86 I$_\textrm{c}$ and ice I$_\textrm{h}$ (the common low-density ice
87 polymorphs) and ice B (a higher density, but very stable crystal
88 structure observed by B\'{a}ez and Clancy in free energy studies of
89 SPC/E).\cite{Baez95b} This work includes results for the water model
90 from which Ice-{\it i} was crystallized (SSD/E) in addition to several
91 common water models (TIP3P, TIP4P, TIP5P, and SPC/E) and a reaction
92 field parametrized single point dipole water model (SSD/RF). The
93 axially elongated variant, Ice-$i^\prime$, was used in calculations
94 involving SPC/E, TIP4P, and TIP5P. The square tetramer in Ice-$i$
95 distorts in Ice-$i^\prime$ to form a rhombus with alternating 85 and
96 95 degree angles. Under SPC/E, TIP4P, and TIP5P, this geometry is
97 better at forming favorable hydrogen bonds. The degree of rhomboid
98 distortion depends on the water model used but is significant enough
99 to split the peak in the radial distribution function which corresponds
100 to diagonal sites in the tetramers.
101
102 \section{Methods and Thermodynamic Integration}
103
104 Canonical ensemble ({\it NVT}) molecular dynamics calculations were
105 performed using the OOPSE molecular mechanics package.\cite{Meineke05}
106 The densities chosen for the simulations were taken from
107 isobaric-isothermal ({\it NPT}) simulations performed at 1 atm and
108 200~K. Each model (and each crystal structure) was allowed to relax for
109 300~ps in the {\it NPT} ensemble before averaging the density to obtain
110 the volumes for the {\it NVT} simulations.All molecules were treated
111 as rigid bodies, with orientational motion propagated using the
112 symplectic DLM integration method described in section
113 \ref{sec:IntroIntegrate}.
114
115
116 We used thermodynamic integration to calculate the Helmholtz free
117 energies ({\it A}) of the listed water models at various state
118 points. Thermodynamic integration is an established technique that has
119 been used extensively in the calculation of free energies for
120 condensed phases of
121 materials.\cite{Frenkel84,Hermens88,Meijer90,Baez95a,Vlot99}. This
122 method uses a sequence of simulations over which the system of
123 interest is converted into a reference system for which the free
124 energy is known analytically ($A_0$). The difference in potential
125 energy between the reference system and the system of interest
126 ($\Delta V$) is then integrated in order to determine the free energy
127 difference between the two states:
128 \begin{equation}
129 A = A_0 + \int_0^1 \left\langle \Delta V \right\rangle_\lambda d\lambda.
130 \end{equation}
131 Here, $\lambda$ is the parameter that governs the transformation
132 between the reference system and the system of interest. For
133 crystalline phases, an harmonically-restrained (Einstein) crystal is
134 chosen as the reference state, while for liquid phases, the ideal gas
135 is taken as the reference state. Figure \ref{fig:integrationPath}
136 shows an example integration path for converting a crystalline system
137 to the Einstein crystal reference state.
138 \begin{figure}
139 \includegraphics[width=\linewidth]{./figures/integrationPath.pdf}
140 \caption{An example integration path to convert an unrestrained
141 crystal ($\lambda = 1$) to the Einstein crystal reference state
142 ($\lambda = 0$). Note the increase in samples at either end of the
143 path to improve the smoothness of the curve. For reversible processes,
144 conversion of the Einstein crystal back to the system of interest will
145 give an identical plot, thereby integrating to the same result.}
146 \label{fig:integrationPath}
147 \end{figure}
148
149 In an Einstein crystal, the molecules are restrained at their ideal
150 lattice locations and orientations. Using harmonic restraints, as
151 applied by B\'{a}ez and Clancy, the total potential for this reference
152 crystal ($V_\mathrm{EC}$) is the sum of all the harmonic restraints,
153 \begin{equation}
154 V_\mathrm{EC} = \frac{K_\mathrm{v}r^2}{2} + \frac{K_\theta\theta^2}{2} +
155 \frac{K_\omega\omega^2}{2},
156 \end{equation}
157 where $K_\mathrm{v}$, $K_\mathrm{\theta}$, and $K_\mathrm{\omega}$ are
158 the spring constants restraining translational motion and deflection
159 of and rotation around the principle axis of the molecule
160 respectively. These spring constants are typically calculated from
161 the mean-square displacements of water molecules in an unrestrained
162 ice crystal at 200~K. For these studies, $K_\mathrm{v} =
163 4.29$~kcal~mol$^{-1}$~\AA$^{-2}$, $K_\theta\ =
164 13.88$~kcal~mol$^{-1}$~rad$^{-2}$, and $K_\omega\ =
165 17.75$~kcal~mol$^{-1}$~rad$^{-2}$. It is clear from
166 Fig. \ref{fig:waterSpring} that the values of $\theta$ range from $0$
167 to $\pi$, while $\omega$ ranges from $-\pi$ to $\pi$. The partition
168 function for a molecular crystal restrained in this fashion can be
169 evaluated analytically, and the Helmholtz Free Energy ({\it A}) is
170 given by
171 \begin{equation}
172 \begin{split}
173 A = E_m &- kT\ln\left(\frac{kT}{h\nu}\right)^3 \\
174 &- kT\ln\left[\pi^\frac{1}{2}\left(
175 \frac{8\pi^2I_\mathrm{A}kT}{h^2}\right)^\frac{1}{2}
176 \left(\frac{8\pi^2I_\mathrm{B}kT}{h^2}\right)^\frac{1}{2}
177 \left(\frac{8\pi^2I_\mathrm{C}kT}{h^2}\right)^\frac{1}{2}
178 \right] \\
179 &- kT\ln\left[\frac{kT}{2(\pi K_\omega K_\theta)^{\frac{1}{2}}}
180 \exp\left(-\frac{kT}{2K_\theta}\right)
181 \int_0^{\left(\frac{kT}{2K_\theta}\right)^\frac{1}{2}}
182 \exp(t^2)\mathrm{d}t\right],
183 \end{split}
184 \label{eq:ecFreeEnergy}
185 \end{equation}
186 where $2\pi\nu = (K_\mathrm{v}/m)^{1/2}$, and $E_m$ is the minimum
187 potential energy of the ideal crystal.\cite{Baez95a} The choice of an
188 Einstein crystal reference state is somewhat arbitrary. Any ideal
189 system for which the partition function is known exactly could be used
190 as a reference point as long as the system does not undergo a phase
191 transition during the integration path between the real and ideal
192 systems. Nada and van der Eerden have shown that the use of different
193 force constants in the Einstein crystal does not affect the total
194 free energy, and Gao {\it et al.} have shown that free energies
195 computed with the Debye crystal reference state differ from the
196 Einstein crystal by only a few tenths of a
197 kJ~mol$^{-1}$.\cite{Nada03,Gao00} These free energy differences can
198 lead to some uncertainty in the computed melting point of the solids.
199 \begin{figure}
200 \centering
201 \includegraphics[width=3.5in]{./figures/rotSpring.pdf}
202 \caption{Possible orientational motions for a restrained molecule.
203 $\theta$ angles correspond to displacement from the body-frame {\it
204 z}-axis, while $\omega$ angles correspond to rotation about the
205 body-frame {\it z}-axis. $K_\theta$ and $K_\omega$ are spring
206 constants for the harmonic springs restraining motion in the $\theta$
207 and $\omega$ directions.}
208 \label{fig:waterSpring}
209 \end{figure}
210
211 In the case of molecular liquids, the ideal vapor is chosen as the
212 target reference state. There are several examples of liquid state
213 free energy calculations of water models present in the
214 literature.\cite{Hermens88,Quintana92,Mezei92,Baez95b} These methods
215 typically differ in regard to the path taken for switching off the
216 interaction potential to convert the system to an ideal gas of water
217 molecules. In this study, we applied one of the most convenient
218 methods and integrated over the $\lambda^4$ path, where all
219 interaction parameters are scaled equally by this transformation
220 parameter. This method has been shown to be reversible and provide
221 results in excellent agreement with other established
222 methods.\cite{Baez95b}
223
224 The Helmholtz free energy error was determined in the same manner in
225 both the solid and the liquid free energy calculations . At each point
226 along the integration path, we calculated the standard deviation of
227 the potential energy difference. Addition or subtraction of these
228 values to each of their respective points and integrating the curve
229 again provides the upper and lower bounds of the uncertainty in the
230 Helmholtz free energy.
231
232 Near the cutoff radius ($0.85 * r_{cut}$), charge, dipole, and
233 Lennard-Jones interactions were gradually reduced by a cubic switching
234 function. By applying this function, these interactions are smoothly
235 truncated, thereby avoiding the poor energy conservation which results
236 from harsher truncation schemes. The effect of a long-range
237 correction was also investigated on select model systems in a variety
238 of manners. For the SSD/RF model, a reaction field with a fixed
239 dielectric constant of 80 was applied in all
240 simulations.\cite{Onsager36} For a series of the least computationally
241 expensive models (SSD/E, SSD/RF, TIP3P, and SPC/E), simulations were
242 performed with longer cutoffs of 10.5, 12, 13.5, and 15~\AA\ to
243 compare with the 9~\AA\ cutoff results. Finally, the effects of using
244 the Ewald summation were estimated for TIP3P and SPC/E by performing
245 single configuration Particle-Mesh Ewald (PME) calculations for each
246 of the ice polymorphs.\cite{Ponder87} The calculated energy difference
247 in the presence and absence of PME was applied to the previous results
248 in order to predict changes to the free energy landscape.
249
250 \section{Initial Free Energy Results}
251
252 The calculated free energies of proton-ordered variants of three low
253 density polymorphs (I$_\textrm{h}$, I$_\textrm{c}$, and Ice-{\it i} or
254 Ice-$i^\prime$) and the stable higher density ice B are listed in
255 table \ref{tab:freeEnergy}. Ice B was included because it has been
256 shown to be a minimum free energy structure for SPC/E at ambient
257 conditions.\cite{Baez95b} In addition to the free energies, the
258 relevant transition temperatures at standard pressure are also
259 displayed in table \ref{tab:freeEnergy}. These free energy values
260 indicate that Ice-{\it i} is the most stable state for all of the
261 investigated water models. With the free energy at these state
262 points, the Gibbs-Helmholtz equation was used to project to other
263 state points and to build phase diagrams. Figures
264 \ref{fig:tp3PhaseDia} and \ref{fig:ssdrfPhaseDia} are example diagrams
265 built from the results for the TIP3P and SSD/RF water models. All
266 other models have similar structure, although the crossing points
267 between the phases move to different temperatures and pressures as
268 indicated from the transition temperatures in table
269 \ref{tab:freeEnergy}. It is interesting to note that ice
270 I$_\textrm{h}$ (and ice I$_\textrm{c}$ for that matter) do not appear
271 in any of the phase diagrams for any of the models. For purposes of
272 this study, ice B is representative of the dense ice polymorphs. A
273 recent study by Sanz {\it et al.} provides details on the phase
274 diagrams for SPC/E and TIP4P at higher pressures than those studied
275 here.\cite{Sanz04}
276 \begin{table}
277 \centering
278 \caption{HELMHOLTZ FREE ENERGIES AND TRANSITION TEMPERATURES AT 1
279 ATMOSPHERE FOR SEVERAL WATER MODELS}
280
281 \footnotesize
282 \begin{tabular}{lccccccc}
283 \toprule
284 \toprule
285 Water Model & I$_\textrm{h}$ & I$_\textrm{c}$ & B & Ice-{\it i} & Ice-$i^\prime$ & $T_\textrm{m}$ (*$T_\textrm{s}$) & $T_\textrm{b}$\\
286 \cmidrule(lr){2-6}
287 \cmidrule(l){7-8}
288 & \multicolumn{5}{c}{(kcal mol$^{-1}$)} & \multicolumn{2}{c}{(K)}\\
289 \midrule
290 TIP5P & -11.85(3) & -11.86(2) & -11.96(2) & - & -12.29(2) & 266(7) & 337(4)\\
291 TIP4P & -11.84(3) & -12.04(2) & -12.08(3) & - & -12.33(3) & 262(6) & 354(4)\\
292 TIP3P & -11.41(2) & -11.23(3) & -11.82(3) & -12.30(3) & - & 269(7) & 357(4)\\
293 SPC/E & -12.87(2) & -13.05(2) & -13.26(3) & - & -13.55(2) & 299(6) & 396(4)\\
294 SSD/E & -11.27(2) & -11.19(4) & -12.09(2) & -12.54(2) & - & *355(4) & -\\
295 SSD/RF & -11.96(2) & -11.60(2) & -12.53(3) & -12.79(2) & - & 278(7) & 382(4)\\
296 \bottomrule
297 \end{tabular}
298 \label{tab:freeEnergy}
299 \end{table}
300
301 \begin{figure}
302 \centering
303 \includegraphics[width=\linewidth]{./figures/tp3PhaseDia.pdf}
304 \caption{Phase diagram for the TIP3P water model in the low pressure
305 regime. The displayed $T_m$ and $T_b$ values are good predictions of
306 the experimental values; however, the solid phases shown are not the
307 experimentally observed forms. Both cubic and hexagonal ice $I$ are
308 higher in energy and don't appear in the phase diagram.}
309 \label{fig:tp3PhaseDia}
310 \end{figure}
311
312 \begin{figure}
313 \centering
314 \includegraphics[width=\linewidth]{./figures/ssdrfPhaseDia.pdf}
315 \caption{Phase diagram for the SSD/RF water model in the low pressure
316 regime. Calculations producing these results were done under an
317 applied reaction field. It is interesting to note that this
318 computationally efficient model (over 3 times more efficient than
319 TIP3P) exhibits phase behavior similar to the less computationally
320 conservative charge based models.}
321 \label{fig:ssdrfPhaseDia}
322 \end{figure}
323
324 We note that all of the crystals investigated in this study are ideal
325 proton-ordered antiferroelectric structures. All of the structures
326 obey the Bernal-Fowler rules and should be able to form stable
327 proton-{\it disordered} crystals which have the traditional
328 $k_\textrm{B}$ln(3/2) residual entropy at 0~K.\cite{Bernal33,Pauling35}
329 Simulations of proton-disordered structures are relatively unstable
330 with all but the most expensive water models.\cite{Nada03} Our
331 simulations have therefore been performed with the ordered
332 antiferroelectric structures which do not require the residual entropy
333 term to be accounted for in the free energies. This may result in some
334 discrepancies when comparing our melting temperatures to the melting
335 temperatures that have been calculated via thermodynamic integrations
336 of the disordered structures.\cite{Sanz04}
337
338 Most of the water models have melting points that compare quite
339 favorably with the experimental value of 273~K. The unfortunate
340 aspect of this result is that this phase change occurs between
341 Ice-{\it i} and the liquid state rather than ice I$_h$ and the liquid
342 state. These results do not contradict other studies. Studies of ice
343 I$_h$ using TIP4P predict a $T_m$ ranging from 191 to 238~K
344 (differences being attributed to choice of interaction truncation and
345 different ordered and disordered molecular
346 arrangements).\cite{Nada03,Vlot99,Gao00,Sanz04} If the presence of ice
347 B and Ice-{\it i} were omitted, a $T_\textrm{m}$ value around 200~K
348 would be predicted from this work. However, the $T_\textrm{m}$ from
349 Ice-{\it i} is calculated to be 262~K, indicating that these
350 simulation based structures ought to be included in studies probing
351 phase transitions with this model. Also of interest in these results
352 is that SSD/E does not exhibit a melting point at 1 atm but does
353 sublime at 355~K. This is due to the significant stability of
354 Ice-{\it i} over all other polymorphs for this particular model under
355 these conditions. While troubling, this behavior resulted in the
356 spontaneous crystallization of Ice-{\it i} which led us to investigate
357 this structure. These observations provide a warning that simulations
358 of SSD/E as a ``liquid'' near 300~K are actually metastable and run
359 the risk of spontaneous crystallization. However, when a longer
360 cutoff radius is used, SSD/E prefers the liquid state under standard
361 temperature and pressure.
362
363 \section{Effects of Potential Truncation}
364
365 \begin{figure}
366 \includegraphics[width=\linewidth]{./figures/cutoffChange.pdf}
367 \caption{Free energy as a function of cutoff radius for SSD/E, TIP3P,
368 SPC/E, SSD/RF with a reaction field, and the TIP3P and SPC/E models
369 with an added Ewald correction term. Error for the larger cutoff
370 points is equivalent to that observed at 9.0~\AA\ (see Table
371 \ref{tab:freeEnergy}). Data for ice I$_\textrm{c}$ with TIP3P using
372 both 12 and 13.5~\AA\ cutoffs were omitted because the crystal was
373 prone to distortion and melting at 200~K. Ice-$i^\prime$ is the
374 form of Ice-{\it i} used in the SPC/E simulations.}
375 \label{fig:incCutoff}
376 \end{figure}
377
378 For the more computationally efficient water models, we have also
379 investigated the effect of potential truncation on the computed free
380 energies as a function of the cutoff radius. As seen in
381 Fig. \ref{fig:incCutoff}, the free energies of the ice polymorphs with
382 water models lacking a long-range correction show significant cutoff
383 dependence. In general, there is a narrowing of the free energy
384 differences while moving to greater cutoff radii. As the free
385 energies for the polymorphs converge, the stability advantage that
386 Ice-{\it i} exhibits is reduced. Adjacent to each of these plots are
387 results for systems with applied or estimated long-range corrections.
388 SSD/RF was parametrized for use with a reaction field, and the benefit
389 provided by this computationally inexpensive correction is apparent.
390 The free energies are largely independent of the size of the reaction
391 field cavity in this model, so small cutoff radii mimic bulk
392 calculations quite well under SSD/RF.
393
394 Although TIP3P was parametrized for use without the Ewald summation,
395 we have estimated the effect of this method for computing long-range
396 electrostatics for both TIP3P and SPC/E. This was accomplished by
397 calculating the potential energy of identical crystals both with and
398 without particle mesh Ewald (PME). Similar behavior to that observed
399 with reaction field is seen for both of these models. The free
400 energies show reduced dependence on cutoff radius and span a narrower
401 range for the various polymorphs. Like the dipolar water models,
402 TIP3P displays a relatively constant preference for the Ice-{\it i}
403 polymorph. Crystal preference is much more difficult to determine for
404 SPC/E. Without a long-range correction, each of the polymorphs
405 studied assumes the role of the preferred polymorph under different
406 cutoff radii. The inclusion of the Ewald correction flattens and
407 narrows the gap in free energies such that the polymorphs are
408 isoenergetic within statistical uncertainty. This suggests that other
409 conditions, such as the density in fixed-volume simulations, can
410 influence the polymorph expressed upon crystallization.
411
412 \section{Expanded Results Using Damped Shifted Force Electrostatics}
413
414 In chapter \ref{chap:electrostatics}, we discussed in detail a
415 pairwise method for handling electrostatics (shifted force, {\sc sf})
416 that can be used as a simple and efficient replacement for the Ewald
417 summation. Answering the question of the free energies of these ice
418 polymorphs with varying water models would be an interesting
419 application of this technique. To this end, we set up thermodynamic
420 integrations of all of the previously discussed ice polymorphs using
421 the {\sc sf} technique with a cutoff radius of 12~\AA\ and an $\alpha$
422 of 0.2125~\AA . These calculations were performed on TIP5P-E and
423 TIP4P-Ew (variants of the root models optimized for the Ewald
424 summation) as well as SPC/E, SSD/RF, and TRED (see section
425 \ref{sec:tredWater}).
426
427 \begin{table}
428 \centering
429 \caption{HELMHOLTZ FREE ENERGIES OF ICE POLYMORPHS USING THE DAMPED
430 SHIFTED FORCE CORRECTION}
431 \begin{tabular}{ lccccc }
432 \toprule
433 \toprule
434 Model & I$_\textrm{h}$ & I$_\textrm{c}$ & B & Ice-$i$ & Ice-$i^\prime$ \\
435 \cmidrule(lr){2-6}
436 & \multicolumn{5}{c}{(kcal mol$^{-1}$)} \\
437 \midrule
438 TIP5P-E & -11.98(4) & -11.96(4) & & - & -11.95(3) \\
439 TIP4P-Ew & -13.11(3) & -13.09(3) & -12.97(3) & - & -12.98(3) \\
440 SPC/E & -12.99(3) & -13.00(3) & -13.03(3) & - & -12.99(3) \\
441 SSD/RF & -11.83(3) & -11.66(4) & -12.32(3) & -12.39(3) & - \\
442 TRED & -12.61(3) & -12.43(3) & -12.89(3) & -13.12(3) & - \\
443 \end{tabular}
444 \label{tab:dampedFreeEnergy}
445 \end{table}
446 The results of these calculations in table \ref{tab:dampedFreeEnergy}
447 show similar behavior to the Ewald results in figure
448 \ref{fig:incCutoff}, at least for SSD/RF and SPC/E which are present
449 in both. The ice polymorph Helmholtz free energies for SSD/RF order in
450 the same fashion; however Ice-$i$ and ice B are quite a bit closer in
451 free energy (nearly isoenergetic). The free energy differences between
452 ice polymorphs for TRED water parallel SSD/RF, with the exception that
453 ice B is destabilized such that it is not very close to Ice-$i$. The
454 SPC/E results really show the near isoenergetic behavior when using
455 the electrostatics correction. Ice B has the lowest Helmholtz free
456 energy; however, all the polymorph results overlap within error.
457
458 The most interesting results from these calculations come from the
459 more expensive TIP4P-Ew and TIP5P-E results. Both of these models were
460 optimized for use with an electrostatic correction and are
461 geometrically arranged to mimic water following two different
462 ideas. In TIP5P-E, the primary location for the negative charge in the
463 molecule is assigned to the lone-pairs of the oxygen, while TIP4P-Ew
464 places the negative charge near the center-of-mass along the H-O-H
465 bisector. There is some debate as to which is the proper choice for
466 the negative charge location, and this has in part led to a six-site
467 water model that balances both of these options.\cite{Vega05,Nada03}
468 The limited results in table \ref{tab:dampedFreeEnergy} support the
469 results of Vega {\it et al.}, which indicate the TIP4P charge location
470 geometry is more physically valid.\cite{Vega05} With the TIP4P-Ew
471 water model, the experimentally observed polymorph (ice
472 I$_\textrm{h}$) is the preferred form with ice I$_\textrm{c}$ slightly
473 higher in energy, though overlapping within error, and the less
474 realistic ice B and Ice-$i^\prime$ are destabilized relative to these
475 polymorphs. TIP5P-E shows similar behavior to SPC/E, where there is no
476 real free energy distinction between the various polymorphs and lend
477 credence to other results indicating the preferred form of TIP5P at
478 1~atm is a structure similar to ice B.\cite{Yamada02,Vega05,Abascal05}
479 These results indicate that TIP4P-Ew is a better mimic of real water
480 than these other models when studying crystallization and solid forms
481 of water.
482
483 \section{Conclusions}
484
485 In this work, thermodynamic integration was used to determine the
486 absolute free energies of several ice polymorphs. The new polymorph,
487 Ice-$i$ was observed to be the stable crystalline state for {\it
488 all} the water models when using a 9.0~\AA\ cutoff. However, the free
489 energy partially depends on simulation conditions (particularly on the
490 choice of long range correction method). Regardless, Ice-$i$ was
491 still observed to be a stable polymorph for all of the studied water
492 models.
493
494 So what is the preferred solid polymorph for simulated water? As
495 indicated above, the answer appears to be dependent both on the
496 conditions and the model used. In the case of short cutoffs without a
497 long-range interaction correction, Ice-$i$ and Ice-$i^\prime$ have
498 the lowest free energy of the studied polymorphs with all the models.
499 Ideally, crystallization of each model under constant pressure
500 conditions, as was done with SSD/E, would aid in the identification of
501 their respective preferred structures. This work, however, helps
502 illustrate how studies involving one specific model can lead to
503 insight about important behavior of others.
504
505 We also note that none of the water models used in this study are
506 polarizable or flexible models. It is entirely possible that the
507 polarizability of real water makes Ice-$i$ substantially less stable
508 than ice I$_\textrm{h}$. The dipole moment of the water molecules
509 increases as the system becomes more condensed, and the increasing
510 dipole moment should destabilize the tetramer structures in
511 Ice-$i$. Right now, using TIP4P-Ew with an electrostatic correction
512 gives the proper thermodynamically preferred state, and we recommend
513 this arrangement for study of crystallization processes if the
514 computational cost increase that comes with including polarizability
515 is an issue.
516
517 Finally, due to the stability of Ice-$i$ in the investigated
518 simulation conditions, the question arises as to possible experimental
519 observation of this polymorph. The rather extensive past and current
520 experimental investigation of water in the low pressure regime makes
521 us hesitant to ascribe any relevance to this work outside of the
522 simulation community. It is for this reason that we chose a name for
523 this polymorph which involves an imaginary quantity. That said, there
524 are certain experimental conditions that would provide the most ideal
525 situation for possible observation. These include the negative
526 pressure or stretched solid regime, small clusters in vacuum
527 deposition environments, and in clathrate structures involving small
528 non-polar molecules. For the purpose of comparison with experimental
529 results, we have calculated the oxygen-oxygen pair correlation
530 function, $g_\textrm{OO}(r)$, and the structure factor, $S(\vec{q})$
531 for the two Ice-{\it i} variants (along with example ice
532 I$_\textrm{h}$ and I$_\textrm{c}$ plots) at 77~K, and they are shown in
533 figures \ref{fig:gofr} and \ref{fig:sofq} respectively. It is
534 interesting to note that the structure factors for Ice-$i^\prime$ and
535 Ice-I$_c$ are quite similar. The primary differences are small peaks
536 at 1.125, 2.29, and 2.53~\AA$^{-1}$, so particular attention to these
537 regions would be needed to identify the new $i^\prime$ variant from
538 the I$_\textrm{c}$ polymorph.
539
540
541 \begin{figure}
542 \includegraphics[width=\linewidth]{./figures/iceGofr.pdf}
543 \caption{Radial distribution functions of Ice-{\it i} and ice
544 I$_\textrm{c}$ calculated from from simulations of the SSD/RF water
545 model at 77~K.}
546 \label{fig:gofr}
547 \end{figure}
548
549 \begin{figure}
550 \includegraphics[width=\linewidth]{./figures/sofq.pdf}
551 \caption{Predicted structure factors for Ice-{\it i} and ice
552 I$_\textrm{c}$ at 77~K. The raw structure factors have been
553 convoluted with a gaussian instrument function (0.075~\AA$^{-1}$
554 width) to compensate for the truncation effects in our finite size
555 simulations. The labeled peaks compared favorably with ``spurious''
556 peaks observed in experimental studies of amorphous solid
557 water.\cite{Bizid87}}
558 \label{fig:sofq}
559 \end{figure}
560