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Revision 3003 by chrisfen, Thu Sep 7 20:42:27 2006 UTC vs.
Revision 3004 by chrisfen, Mon Sep 18 20:32:11 2006 UTC

# Line 220 | Line 220 | methods.\cite{Baez95b}
220   parameter.  This method has been shown to be reversible and provide
221   results in excellent agreement with other established
222   methods.\cite{Baez95b}
223 +
224 + The Helmholtz free energy error was determined in the same manner in
225 + both the solid and the liquid free energy calculations . At each point
226 + along the integration path, we calculated the standard deviation of
227 + the potential energy difference. Addition or subtraction of these
228 + values to each of their respective points and integrating the curve
229 + again provides the upper and lower bounds of the uncertainty in the
230 + Helmholtz free energy.
231  
232   Near the cutoff radius ($0.85 * r_{cut}$), charge, dipole, and
233   Lennard-Jones interactions were gradually reduced by a cubic switching
# Line 427 | Line 435 | TIP5P-E & & & & - & \\
435   \cmidrule(lr){2-6}
436   & \multicolumn{5}{c}{(kcal mol$^{-1}$)} \\
437   \midrule
438 < TIP5P-E & & & & - & \\
439 < TIP4P-Ew & & -13.09(3) & & - & -12.98(3) \\
440 < SPC/E & -12.99(3) & -13.00(3) & & - & -12.99(3) \\
438 > TIP5P-E & -11.98(4) & -11.96(4) & & - & -11.95(3) \\
439 > TIP4P-Ew & -13.11(3) & -13.09(3) & -12.97(3) & - & -12.98(3) \\
440 > SPC/E & -12.99(3) & -13.00(3) & -13.03(3) & - & -12.99(3) \\
441   SSD/RF & -11.83(3) & -11.66(4) & -12.32(3) & -12.39(3) & - \\
442   TRED & -12.61(3) & -12.43(3) & -12.89(3) & -13.12(3) & - \\
443   \end{tabular}
# Line 442 | Line 450 | ice B is destabilized such that it is no longer nearly
450   the same fashion; however Ice-$i$ and ice B are quite a bit closer in
451   free energy (nearly isoenergetic). The free energy differences between
452   ice polymorphs for TRED water parallel SSD/RF, with the exception that
453 < ice B is destabilized such that it is no longer nearly isoenergetic
454 < with Ice-$i$.
453 > ice B is destabilized such that it is not very close to Ice-$i$. The
454 > SPC/E results really show the near isoenergetic behavior when using
455 > the electrostatics correction. Ice B has the lowest Helmholtz free
456 > energy; however, all the polymorph results overlap within error.
457  
458 + The most interesting results from these calculations come from the
459 + more expensive TIP4P-Ew and TIP5P-E results. Both of these models were
460 + optimized for use with an electrostatic correction and are
461 + geometrically arranged to mimic water following two different
462 + ideas. In TIP5P-E, the primary location for the negative charge in the
463 + molecule is assigned to the lone-pairs of the oxygen, while TIP4P-Ew
464 + places the negative charge near the center-of-mass along the H-O-H
465 + bisector. There is some debate as to which is the proper choice for
466 + the negative charge location, and this has in part led to a six-site
467 + water model that balances both of these options.\cite{Vega05,Nada03}
468 + The limited results in table \ref{tab:dampedFreeEnergy} support the
469 + results of Vega {\it et al.}, which indicate the TIP4P charge location
470 + geometry is more physically valid.\cite{Vega05} With the TIP4P-Ew
471 + water model, the experimentally observed polymorph (ice
472 + I$_\textrm{h}$) is the preferred form with ice I$_\textrm{c}$ slightly
473 + higher in energy, though overlapping within error, and the less
474 + realistic ice B and Ice-$i^\prime$ are destabilized relative to these
475 + polymorphs. TIP5P-E shows similar behavior to SPC/E, where there is no
476 + real free energy distinction between the various polymorphs and lend
477 + credence to other results indicating the preferred form of TIP5P at
478 + 1~atm is a structure similar to ice B.\cite{Yamada02,Vega05,Abascal05}
479 + These results indicate that TIP4P-Ew is a better mimic of real water
480 + than these other models when studying crystallization and solid forms
481 + of water.
482 +
483   \section{Conclusions}
484  
485   In this work, thermodynamic integration was used to determine the

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