trunk/commandLine/commandLine.c

#include <stdio.h>
#include <stdlib.h>
#include <string.h>


char *program_name; /*the name of the program */
void usage(void);

int main(argc, argv)
     int argc;
     char *argv[];
{
  int i,j; // loop counters

  char *in_name = NULL; // name of the input file
  char* out_prefix = NULL; // the output prefix
  char current_flag; // used in parsing the flags
  int done = 0; // multipurpose boolean
  int have_prefix; // boolean for the output prefix

  
  // here we set the name of the program need by the usage message
  program_name = argv[0];
  

  for( i = 1; i < argc; i++){
    
    if(argv[i][0] =='-'){

      // parse the option
      
      if(argv[i][1] == '-' ){

        // parse long word options
        
        if( !strcmp( argv[i], "--GofR" ) ){
          calcGofR = 1;
          i++;
          strcpy( gofR1, argv[i] );
          i++;
          strcpy( gofR2, argv[i] );
        }

        else if( !strcmp( argv[i], "--CosCorr" ) ){
          calcCosCorr = 1;
          i++;
          strcpy( cosCorr1, argv[i] );
          i++;
          strcpy( cosCorr2, argv[i] );
        }

        else if( !strcmp( argv[i], "--MuCorr") ){
          calcMuCorr = 1;
          i++;
          strcpy( muCorr, argv[i] );
        }
        
        else if( !strcmp( argv[i], "--startFrame" ) ){
          haveStartFrame = 1;
          i++;
          startFrame = atoi(argv[i]);
          startFrame--;
        }

        else if( !strcmp( argv[i], "--endFrame" ) ){
          haveEndFrame = 1;
          i++;
          endFrame = atoi(argv[i]);
        }

        else{
          fprintf( stderr, 
                   "Invalid option \"%s\"\n", argv[i] );
          usage();
        }
      }
      
      else{
        
        // parse single character options
        
        done =0;
        j = 1;
        current_flag = argv[i][j];
        while( (current_flag != '\0') && (!done) ){
          
          switch(current_flag){

          case 'o':
            // -o <prefix> => the output prefix.

            i++;
            out_prefix = argv[i];
            have_prefix = 1;
            done = 1;
            break;

          case 'h':
            // -h => give the usage
            
            usage();
            break;
        
          case 'r':
            // calculates the rmsd

            calcRMSD = 1;
            break;

          case 'g':
            // calculate all to all g(r)

            calcGofR = 1;
            strcpy( gofR1, "all" );
            strcpy( gofR2, "all" );
            break;

          default:

            (void)fprintf(stderr, "Bad option \"-%c\"\n", current_flag);
            usage();
          }
          j++;
          current_flag = argv[i][j];
        }
      }
    }

    else{
      
      if( in_name != NULL ){
        fprintf( stderr, 
                 "Error at \"%s\", program does not currently support\n"
                 "more than one input file.\n"
                 "\n",
                 argv[i]);
        usage();
      }

      in_name = argv[i];
    }
  }

  if(in_name == NULL){
    usage();
  }

  if( !have_prefix ) out_prefix = in_name;

}


/***************************************************************************
 * prints out the usage for the command line arguments, then exits.
 ***************************************************************************/

void usage(){
  (void)fprintf(stdout, 
                "The proper usage is: %s [options] <input_file>\n"
                "\n"
                "Options:\n"
                "\n"
                "   short:\n"
                "   ------\n"
                "   -h              Display this message\n"
                "   -o <name>       The output name/prefix\n"
                "   -r              the r flag\n"
                "   -i <#>          set number to <#>\n"
                
                "\n"
                "   long:\n"
                "   -----\n"
                "   --flag1 <arg1> <arg2>     does flag 1 for arg1 and 2\n"
                "   --flag2 <arg1>            does flag 2 for arg1\n"
                "   --flag3                   does flag 3\n"
                
                "\n"
                "\n",
                program_name);
  exit(8);
}
Revision:	520
Committed:	Mon May 5 22:01:36 2003 UTC (21 years, 2 months ago) by mmeineke
Content type:	text/plain
File size:	3321 byte(s)
Log Message:	started some initial rewrite for the template.
#	User	Rev	Content
1	mmeineke	518	#include <stdio.h>
2			#include <stdlib.h>
3			#include <string.h>
4
5
6			char program_name; /the name of the program */
7			void usage(void);
8
9			int main(argc, argv)
10			int argc;
11			char *argv[];
12			{
13			int i,j; // loop counters
14
15	mmeineke	520	char *in_name = NULL; // name of the input file
16			char* out_prefix = NULL; // the output prefix
17			char current_flag; // used in parsing the flags
18	mmeineke	518	int done = 0; // multipurpose boolean
19	mmeineke	520	int have_prefix; // boolean for the output prefix
20	mmeineke	518
21	mmeineke	520
22			// here we set the name of the program need by the usage message
23			program_name = argv[0];
24
25	mmeineke	518
26			for( i = 1; i < argc; i++){
27
28			if(argv[i][0] =='-'){
29
30			// parse the option
31
32			if(argv[i][1] == '-' ){
33
34			// parse long word options
35
36			if( !strcmp( argv[i], "--GofR" ) ){
37			calcGofR = 1;
38			i++;
39			strcpy( gofR1, argv[i] );
40			i++;
41			strcpy( gofR2, argv[i] );
42			}
43
44			else if( !strcmp( argv[i], "--CosCorr" ) ){
45			calcCosCorr = 1;
46			i++;
47			strcpy( cosCorr1, argv[i] );
48			i++;
49			strcpy( cosCorr2, argv[i] );
50			}
51
52			else if( !strcmp( argv[i], "--MuCorr") ){
53			calcMuCorr = 1;
54			i++;
55			strcpy( muCorr, argv[i] );
56			}
57
58			else if( !strcmp( argv[i], "--startFrame" ) ){
59			haveStartFrame = 1;
60			i++;
61			startFrame = atoi(argv[i]);
62			startFrame--;
63			}
64
65			else if( !strcmp( argv[i], "--endFrame" ) ){
66			haveEndFrame = 1;
67			i++;
68			endFrame = atoi(argv[i]);
69			}
70
71			else{
72			fprintf( stderr,
73			"Invalid option \"%s\"\n", argv[i] );
74			usage();
75			}
76			}
77
78			else{
79
80			// parse single character options
81
82			done =0;
83			j = 1;
84			current_flag = argv[i][j];
85			while( (current_flag != '\0') && (!done) ){
86
87			switch(current_flag){
88
89			case 'o':
90			// -o <prefix> => the output prefix.
91
92			i++;
93			out_prefix = argv[i];
94			have_prefix = 1;
95			done = 1;
96			break;
97
98			case 'h':
99			// -h => give the usage
100
101			usage();
102			break;
103
104			case 'r':
105			// calculates the rmsd
106
107			calcRMSD = 1;
108			break;
109
110			case 'g':
111			// calculate all to all g(r)
112
113			calcGofR = 1;
114			strcpy( gofR1, "all" );
115			strcpy( gofR2, "all" );
116			break;
117
118			default:
119
120			(void)fprintf(stderr, "Bad option \"-%c\"\n", current_flag);
121			usage();
122			}
123			j++;
124			current_flag = argv[i][j];
125			}
126			}
127			}
128
129			else{
130
131			if( in_name != NULL ){
132			fprintf( stderr,
133			"Error at \"%s\", program does not currently support\n"
134			"more than one input file.\n"
135			"\n",
136			argv[i]);
137			usage();
138			}
139
140			in_name = argv[i];
141			}
142			}
143
144			if(in_name == NULL){
145			usage();
146			}
147
148			if( !have_prefix ) out_prefix = in_name;
149
150			}
151
152
153			/***************************************************************************
154			* prints out the usage for the command line arguments, then exits.
155			***************************************************************************/
156
157			void usage(){
158			(void)fprintf(stdout,
159	mmeineke	520	"The proper usage is: %s [options] <input_file>\n"
160	mmeineke	518	"\n"
161			"Options:\n"
162			"\n"
163			" short:\n"
164			" ------\n"
165			" -h Display this message\n"
166	mmeineke	520	" -o <name> The output name/prefix\n"
167			" -r the r flag\n"
168			" -i <#> set number to <#>\n"
169	mmeineke	518
170			"\n"
171			" long:\n"
172			" -----\n"
173	mmeineke	520	" --flag1 <arg1> <arg2> does flag 1 for arg1 and 2\n"
174			" --flag2 <arg1> does flag 2 for arg1\n"
175			" --flag3 does flag 3\n"
176	mmeineke	518
177			"\n"
178			"\n",
179			program_name);
180			exit(8);
181			}