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1 chrisfen 2594 %% This BibTeX bibliography file was created using BibDesk.
2     %% http://bibdesk.sourceforge.net/
3 chrisfen 2575
4    
5 chrisfen 2609 %% Created for Chris Fennell at 2006-03-11 12:19:21 -0500
6 chrisfen 2575
7    
8 chrisfen 2594 %% Saved with string encoding Western (ASCII)
9 chrisfen 2575
10    
11 chrisfen 2594 @STRING{acp = "Adv. Chem. Phys."}
12 chrisfen 2575
13 chrisfen 2594 @STRING{cp = "Chem. Phys."}
14 chrisfen 2575
15 chrisfen 2594 @STRING{cpl = "Chem. Phys. Lett."}
16 chrisfen 2575
17 chrisfen 2594 @STRING{jacs = "J. Am. Chem. Soc."}
18 chrisfen 2575
19 chrisfen 2594 @STRING{jcc = "J. Comput. Chem."}
20 chrisfen 2575
21 chrisfen 2594 @STRING{jcp = "J. Chem. Phys."}
22 chrisfen 2575
23 chrisfen 2594 @STRING{jml = "J. Mol. Liq."}
24 chrisfen 2575
25 chrisfen 2594 @STRING{jpc = "J. Phys. Chem."}
26 chrisfen 2575
27 chrisfen 2594 @STRING{jpca = "J. Phys. Chem. A"}
28 chrisfen 2575
29 chrisfen 2594 @STRING{jpcb = "J. Phys. Chem. B"}
30 chrisfen 2575
31 chrisfen 2594 @STRING{mp = "Mol. Phys."}
32 chrisfen 2575
33 chrisfen 2594 @STRING{pccp = "Phys. Chem. Chem. Phys."}
34 chrisfen 2575
35 chrisfen 2594 @STRING{pnas = "Proc. Natl. Acad. Sci. USA"}
36 chrisfen 2575
37 chrisfen 2594 @STRING{pra = "Phys. Rev. A"}
38 chrisfen 2575
39 chrisfen 2594 @STRING{prb = "Phys. Rev. B"}
40 chrisfen 2575
41 chrisfen 2594 @STRING{pre = "Phys. Rev. E"}
42 chrisfen 2575
43 chrisfen 2594 @STRING{prl = "Phys. Rev. Lett."}
44 chrisfen 2575
45 chrisfen 2594 @STRING{rmp = "Rev. Mod. Phys."}
46 chrisfen 2575
47    
48 chrisfen 2609 @article{deLeeuw80,
49     Author = {S.~W. {de Leeuw} and J.~W. Perram and E.~R. Smith},
50     Date-Added = {2006-03-07 10:26:31 -0500},
51     Date-Modified = {2006-03-07 10:30:11 -0500},
52     Journal = {Proc. R. Soc. London Ser. A},
53     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/deLeeuw_EwaldSum_80.pdf},
54     Number = {1752},
55     Pages = {27-56},
56     Title = {Simulation of Electostatic Systems in Periodic Boundary Conditions. I. Lattice Sums and Dielectric Constants},
57     Volume = {373},
58     Year = {1980}}
59    
60 chrisfen 2601 @article{Essmann95,
61     Author = {U. Essmann and L. Perera and M.~L. Berkowitz and T. Darden and H. Lee and L.~G. Pedersen},
62     Date-Added = {2006-03-05 12:25:25 -0500},
63     Date-Modified = {2006-03-05 12:29:07 -0500},
64     Journal = {J. Chem. Phys.},
65     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/Wolf_Potential/toCite/Essmann_SmoothPME_95.pdf},
66     Number = {19},
67     Pages = {8577-8593},
68     Title = {A smooth particle mesh Ewald method },
69     Volume = {103},
70     Year = {1995}}
71    
72 chrisfen 2595 @article{Kast03,
73     Author = {S.~M. Kast and K.~F. Schmidt and B. Schilling},
74     Date-Added = {2006-02-18 16:47:26 -0500},
75     Date-Modified = {2006-02-18 16:51:25 -0500},
76     Journal = {Chem. Phys. Lett.},
77     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/WolfApplications/Kast_dampedCoulomb_03.pdf},
78     Pages = {398-404},
79     Title = {Integral equation theory for correcting truncation errors in molecular simulations},
80     Volume = {367},
81     Year = {2003}}
82    
83 chrisfen 2594 @article{Tobias01,
84     Author = {D.~J. Tobias},
85     Date-Added = {2006-02-15 11:28:58 -0500},
86     Date-Modified = {2006-02-15 11:32:16 -0500},
87     Journal = {Curr. Opin. Struct. Biol.},
88     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Tobias_ElectrostaticsCalculations_01.pdf},
89     Pages = {253-261},
90     Title = {Electrostatics calculations: recent methodological advances and applications to membranes},
91     Volume = {11},
92     Year = {2001}}
93 chrisfen 2575
94 chrisfen 2594 @article{Zahn02,
95     Author = {D. Zahn and B. Schilling and S.~M. Kast},
96     Date-Added = {2006-02-15 09:21:27 -0500},
97     Date-Modified = {2006-02-15 09:24:07 -0500},
98     Journal = {J. Phys. Chem. B},
99     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/WolfApplications/Zahn_enhancedWolfH2O_02.pdf},
100     Number = {41},
101     Pages = {10725-10732},
102 chrisfen 2595 Title = {Enhancement of the Wolf Damped Coulomb Potential: Static, Dynamic, and Dielectric Properties of Liquid Water from Molecular Simulation},
103 chrisfen 2594 Volume = {106},
104     Year = {2002}}
105 chrisfen 2575
106 chrisfen 2594 @article{Wolf99,
107     Author = {D. Wolf and P. Keblinski and S.~R. Phillpot and J. Eggebrecht},
108     Date-Added = {2006-02-15 09:09:39 -0500},
109     Date-Modified = {2006-02-15 09:25:30 -0500},
110     Journal = {J. Chem. Phys.},
111     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/Wolf_Potential/Wolf_electroCorr_99.pdf},
112     Number = {17},
113     Pages = {8255-8282},
114     Rating = {0},
115     Read = {No},
116 chrisfen 2595 Title = {Exact method for the simulation of Coulombic systems by spherically truncated, pairwise},
117 chrisfen 2594 Volume = {110},
118     Year = {1999}}
119 chrisfen 2575
120 chrisfen 2594 @book{Berne90,
121     Address = {Malabar, Florida},
122     Author = {B.~J. Berne and R. Pecora},
123     Publisher = {Robert E. Krieger Publishing Company, Inc.},
124     Title = {Dynamic Light Scattering},
125     Year = 1990}
126 chrisfen 2575
127 chrisfen 2594 @article{Evans77,
128     Author = {D.~J. Evans},
129     Journal = {Mol. Phys.},
130     Pages = {317-325},
131     Title = {On the representation of orientation space},
132     Volume = 34,
133     Year = 1977}
134 chrisfen 2575
135 chrisfen 2594 @article{Tuckerman92,
136     Author = {M. Tuckerman and B.~J. Berne and G.~J. Martyna},
137     Journal = jcp,
138     Pages = {1990-2001},
139     Title = {Reversible multiple time scale molecular dynamics},
140     Volume = 97,
141     Year = 1992}
142 chrisfen 2575
143 chrisfen 2594 @book{Hansen86,
144     Address = {London},
145     Author = {J.~P. Hansen and I.~R. McDonald},
146     Chapter = 7,
147     Pages = {199-206},
148     Publisher = {Academic Press},
149     Title = {Theory of Simple Liquids},
150     Year = 1986}
151 chrisfen 2575
152 chrisfen 2594 @article{Angelani98,
153     Author = {L. Angelani and G. Parisi and G. Ruocco and G. Viliani},
154     Journal = prl,
155     Number = 21,
156     Pages = {4648-4651},
157     Title = {Connected Network of Minima as a Model Glass: Long Time Dynamics},
158     Volume = 81,
159     Year = 1998}
160 chrisfen 2575
161 chrisfen 2594 @article{Stillinger82,
162     Author = {F.~H. Stillinger and T.~A. Weber},
163     Journal = pra,
164     Number = 2,
165     Pages = {978-989},
166     Title = {Hidden structure in liquids},
167     Volume = 25,
168     Year = 1982}
169 chrisfen 2575
170 chrisfen 2594 @article{Stillinger83,
171     Author = {F.~H. Stillinger and T.~A. Weber},
172     Journal = pra,
173     Number = 4,
174     Pages = {2408-2416},
175     Title = {Dynamics of structural transitions in liquids},
176     Volume = 28,
177     Year = 1983}
178 chrisfen 2575
179 chrisfen 2594 @article{Weber84,
180     Author = {T.~A. Weber and F.~H. Stillinger},
181     Journal = jcp,
182     Number = 6,
183     Pages = {2742-2746},
184     Title = {The effect of density on the inherent structure in liquids},
185     Volume = 80,
186     Year = 1984}
187 chrisfen 2575
188 chrisfen 2594 @article{Stillinger85,
189     Author = {F.~H. Stillinger and T.~A. Weber},
190     Journal = jcp,
191     Number = 9,
192     Pages = {4767-4775},
193     Title = {Inherent structure theory of liquids in the hard-sphere limit},
194     Volume = 83,
195     Year = 1985}
196 chrisfen 2575
197 chrisfen 2594 @article{Stillinger98,
198     Author = {S. Sastry and P.~G. Debenedetti and F.~H. Stillinger},
199     Journal = {Nature},
200     Pages = {554-557},
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204 chrisfen 2575
205 chrisfen 2594 @article{Parkhurst75a,
206     Author = {H.~J. {Parkhurst, Jr.} and J. Jonas},
207     Journal = jcp,
208     Number = 6,
209     Pages = {2698-2704},
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211     Volume = 63,
212     Year = 1975}
213 chrisfen 2575
214 chrisfen 2594 @article{Parkhurst75b,
215     Author = {H.~J. {Parkhurst, Jr.} and J. Jonas},
216     Journal = jcp,
217     Number = 6,
218     Pages = {2705-2709},
219     Title = {Dense liquids. II. The effect of density and temperature on viscosity of tetramethylsilane and benzene},
220     Volume = 63,
221     Year = 1975}
222 chrisfen 2575
223 chrisfen 2594 @article{Forester97,
224     Author = {T.~R. Forester and W. Smith and J.~H.~R. Clarke},
225     Journal = {J. Chem. Soc. - Faraday Transactions},
226     Pages = {613-619},
227     Title = {Antibiotic activity of valinomycin - Molecular dynamics simulations involving the water/membrane interface},
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230 chrisfen 2575
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233     Journal = {Biophys. J.},
234     Pages = {2786-2801},
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237     Year = 1998}
238 chrisfen 2575
239 chrisfen 2594 @article{Cascales98,
240     Author = {J.~J.~L. Cascales and J.~G.~H. Cifre and J.~G. de~la~Torre},
241     Journal = {J. Phys. Chem. B},
242     Pages = {625-631},
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246 chrisfen 2575
247 chrisfen 2594 @article{Bassolino95,
248     Author = {D. Bassolino and H.~E. Alper and T.~R. Stouch},
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250     Pages = {4118-4129},
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252     Volume = 117,
253     Year = 1995}
254 chrisfen 2575
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256     Author = {H.~E. Alper and T.~R. Stouch},
257     Journal = {J. Phys. Chem.},
258     Pages = {5724-5731},
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262 chrisfen 2575
263 chrisfen 2594 @article{Sok92,
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270 chrisfen 2575
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273     Journal = prl,
274     Pages = {3649},
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278 chrisfen 2575
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280     Author = {E. Rabani and J.~D. Gezelter and B.~J. Berne},
281     Journal = {J. Chem. Phys.},
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286 chrisfen 2575
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297     Date-Modified = {2006-02-15 10:18:42 -0500},
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303 chrisfen 2575
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319 chrisfen 2575
320 chrisfen 2594 @article{Zwanzig88,
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335 chrisfen 2575
336 chrisfen 2594 @incollection{Angell85,
337     Address = {Springfield, VA},
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340     Editor = {K.~Ngai and G.~B. Wright},
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344     Year = 1985}
345 chrisfen 2575
346 chrisfen 2594 @article{Bembenek96,
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353 chrisfen 2575
354 chrisfen 2594 @article{Sun97a,
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356     Date-Modified = {2006-02-15 10:33:35 -0500},
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358     Pages = 6346,
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362 chrisfen 2575
363 chrisfen 2594 @article{Spath96,
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371 chrisfen 2594 @book{Warshel91,
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377 chrisfen 2575
378 chrisfen 2594 @article{Vuilleumier97,
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380     Journal = jpc,
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382     Volume = {in press},
383     Year = 1997}
384 chrisfen 2575
385 chrisfen 2594 @article{Kob95a,
386     Author = {W. Kob and H.~C. Andersen},
387     Journal = pre,
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390     Volume = 51,
391     Year = 1995}
392 chrisfen 2575
393 chrisfen 2594 @article{Kob95b,
394     Author = {W. Kob and H.~C. Andersen},
395     Journal = pre,
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400 chrisfen 2575
401 chrisfen 2594 @inproceedings{Gotze89,
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405     Editor = {J.~P. Hansen and D. Levesque and J. Zinn-Justin},
406     Pages = {287-503},
407     Publisher = {North-Holland},
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411 chrisfen 2575
412 chrisfen 2594 @article{Sun97b,
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414     Date-Modified = {2006-02-15 10:33:29 -0500},
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418     Year = 1997}
419 chrisfen 2575
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435 chrisfen 2575
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