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Revision 3966 by plouden, Wed Oct 23 17:29:18 2013 UTC vs.
Revision 3967 by gezelter, Wed Oct 23 20:20:29 2013 UTC

# Line 234 | Line 234 | atom in the ice slab. The resulting basal system was 2
234   allowed to fluctuate to equilibrate to the correct pressure).  The
235   liquid and solid systems were combined by carving out any water
236   molecule from the liquid simulation cell that was within 3~\AA\ of any
237 < atom in the ice slab. The resulting basal system was 24 \AA\ x 36 \AA\ x 99 \AA\ with 900 SPC/E molecules in the ice slab and 1846 SPC/E molecules in the liquid phase. Similarly, the prismatic system was constructed as 36 \AA\ x 36 \AA\ x 86 \AA\ with 1000 SPC/E molecules in the ice slab and 2684 SPC/E molecules in the liquid phase.
237 > atom in the ice slab. The resulting basal system was $23.87 \times 35.83
238 > \times 98.64$ \AA\ with 900 SPC/E molecules in the ice slab, and 1846 in
239 > the liquid phase.  Similarly, the prismatic system was $36.12 \times 36.43
240 > \times 86.10$ \AA\ with 1000 SPC/E molecules in the ice slab and 2684 in
241 > the liquid.
242  
243   Molecular translation and orientational restraints were applied in the
244   early stages of equilibration to prevent melting of the ice slab.
# Line 355 | Line 359 | were accumulated throughout the simulations.
359   established, four successive 0.5~ns runs were performed for each shear
360   rate.  During these simulations, snapshots of the system were taken
361   every 1~ps, and statistics on the structure and dynamics in each bin
362 < were accumulated throughout the simulations.
362 > were accumulated throughout the simulations.  Although there was some
363 > small variation in the measured interfacial width between succcessive
364 > runs, no indication of bulk melting (or crystallization) was observed.
365  
366   \section{Results and discussion}
367  
# Line 373 | Line 379 | measure of the interfacial width.
379   influenced by the RNEMD perturbations to the same degree. Here, we
380   have used the local tetrahedral order parameter as described by
381   Kumar\cite{Kumar09} and Errington\cite{Errington01} as our principal
382 < measure of the interfacial width.
382 > measure of the interfacial width.  A previous study by Bryk and Haymet
383 > also used local tetrahedrality as an order parameter for ice/water
384 > interfaces.\cite{Bryk2004b}
385  
386   The local tetrahedral order parameter, $q(z)$, is given by
387   \begin{equation}
# Line 385 | Line 393 | to lie within the first solvation shell of molecule $k
393   where $\psi_{ikj}$ is the angle formed between the oxygen site on
394   central molecule $k$, and the oxygen sites on two of the four closest
395   molecules, $i$ and $j$.  Molecules $i$ and $j$ are further restricted
396 < to lie within the first solvation shell of molecule $k$.  $N_z = \int
396 > to lie withing the first peak in the pair distribution function for
397 > molecule $k$ (typically $<$ 3.41 \AA\ for water).  $N_z = \int
398   \delta(z_k - z) \mathrm{d}z$ is a normalization factor to account for
399   the varying population of molecules within each finite-width bin.  The
400   local tetrahedral order parameter has a range of $(0,1)$, where the
# Line 396 | Line 405 | bins along the $z$-dimension, and a cutoff radius for
405   $q(z) \approx 0.75$ are more common.
406  
407   To estimate the interfacial width, the system was divided into 100
408 < bins along the $z$-dimension, and a cutoff radius for the first
409 < solvation shell was set to 3.41~\AA\ .  The $q_{z}$ function was
410 < time-averaged to give yield a tetrahedrality profile of the
411 < system. The profile was then fit to a hyperbolic tangent that smoothly
403 < links the liquid and solid states,
408 > bins along the $z$-dimension.  The $q_{z}$ function was time-averaged
409 > to give yield a tetrahedrality profile of the system. The profile was
410 > then fit to a hyperbolic tangent that smoothly links the liquid and
411 > solid states,
412   \begin{equation}\label{tet_fit}
413   q(z) \approx
414   q_{liq}+\frac{q_{ice}-q_{liq}}{2}\left[\tanh\left(\frac{z-l}{w}\right)-\tanh\left(\frac{z-r}{w}\right)\right]+\beta\left|z-
# Line 411 | Line 419 | tetrahedrality profile in the liquid region.  To estim
419   the interface.  $l$ and $r$ are the midpoints of the left and right
420   interfaces, respectively.  The last term in eq. \eqref{tet_fit}
421   accounts for the influence that the weak thermal gradient has on the
422 < tetrahedrality profile in the liquid region.  To estimate the
415 < 10\%-90\% widths commonly used in previous studies,\cite{Bryk02} it is
416 < a simple matter to scale the widths obtained from the hyperbolic
417 < tangent fits to obtain $w_{10-90} = 2.1971 \times w$.\cite{Bryk02}
422 > tetrahedrality profile in the liquid region.
423  
424   In Figures \ref{fig:bComic} and \ref{fig:pComic} we see the
425   $z$-coordinate profiles for tetrahedrality, temperature, and the
# Line 429 | Line 434 | within 10~\AA\ to 15~\AA~of the interfaces) have trans
434   225~$\pm$~5K, can be seen in middle panels.  The transverse velocity
435   profile is shown in the upper panels.  It is clear from the upper
436   panels that water molecules in close proximity to the surface (i.e.
437 < within 10~\AA\ to 15~\AA~of the interfaces) have transverse
438 < velocities quite close to the velocities within the ice block.  There
439 < is no velocity discontinuity at the interface, which indicates that
440 < the shearing of ice/water interfaces occurs in the ``stick'' or
441 < no-slip boundary conditions.
437 > within 10~\AA\ to 15~\AA~of the interfaces) have transverse velocities
438 > quite close to the velocities within the ice block.  There is no
439 > velocity discontinuity at the interface, which indicates that the
440 > shearing of ice/water interfaces occurs in the ``stick'' or no-slip
441 > boundary conditions.
442  
443   \begin{figure}
444   \includegraphics[width=\linewidth]{bComicStrip}
445 < \caption{\label{fig:bComic} The basal interfaces.  Lower panel: the
446 <  local tetrahedral order parameter, $q(z)$, (black circles) and the
447 <  hyperbolic tangent fit (red line).  Middle panel: the imposed
448 <  thermal gradient required to maintain a fixed interfacial
449 <  temperature.  Upper panel: the transverse velocity gradient that
450 <  develops in response to an imposed momentum flux.  The vertical
451 <  dotted lines indicate the locations of the midpoints of the two
452 <  interfaces.}
445 > \caption{\label{fig:bComic} The basal interface with a shear rate of
446 >  XXXX.  Lower panel: the local tetrahedral order parameter, $q(z)$,
447 >  (black circles) and the hyperbolic tangent fit (red line).  Middle
448 >  panel: the imposed thermal gradient required to maintain a fixed
449 >  interfacial temperature.  Upper panel: the transverse velocity
450 >  gradient that develops in response to an imposed momentum flux.  The
451 >  vertical dotted lines indicate the locations of the midpoints of the
452 >  two interfaces.}
453   \end{figure}
454  
455   \begin{figure}
456   \includegraphics[width=\linewidth]{pComicStrip}
457 < \caption{\label{fig:pComic} The prismatic interfaces.  Panel
457 > \caption{\label{fig:pComic} The prismatic interface with a shear rate
458 >  of XXXX.  Panel
459    descriptions match those in figure \ref{fig:bComic}}
460   \end{figure}
461  
462 < From the fits using eq. \eqref{tet_fit}, we find the interfacial
463 < width for the basal and prismatic systems to be 3.2~$\pm$~0.4~\AA\ and
462 > From the fits using eq. \eqref{tet_fit}, we find the interfacial width
463 > for the basal and prismatic systems to be 3.2~$\pm$~0.4~\AA\ and
464   3.6~$\pm$~0.2~\AA\ , respectively, with no applied momentum flux. Over
465   the range of shear rates investigated, $0.6 \pm 0.3 \mathrm{ms}^{-1}
466   \rightarrow 5.3 \pm 0.5 \mathrm{ms}^{-1}$ for the basal system and
# Line 462 | Line 468 | error bars.
468   \mathrm{ms}^{-1}$ for the prismatic, we found no appreciable change in
469   the interface width. The fit values for the interfacial width ($w$)
470   over all shear rates contained the values reported above within their
471 < error bars.
471 > error bars.  Note that the interfacial widths reported here are based
472 > on the hyperbolic tangent parameter $w$ in Eq. \ref{tet_fit}.  This is
473 > related to, but not identical with, the 10\%-90\% intefacial widths
474 > commonly used in previous studies.\cite{Bryk02,Bryk2004b} To estimate
475 > the 10\%-90\% widths, it is a simple matter to scale the widths
476 > obtained from the hyperbolic tangent fits to obtain $w_{10-90} =
477 > 2.1971 \times w$.\cite{Bryk02,Bryk2004b} This results in $w_{10-90}$
478 > values of 7.0~$\pm$~0.9~\AA\ for the basal face, and 7.9~$\pm$~0.4
479 > \AA\ for the prismatic face.  These are somewhat smaller than
480 > previously reported values.
481 >
482 > \begin{figure}
483 > \includegraphics[width=\linewidth]{interface_width_by_shear_rate}
484 > \caption{\label{fig:widthByShear} The width of the ice water
485 >  interfaces (as measured by Eq. \ref{tet_fit}) exhibits no dependence
486 >  on the applied shear rate between the ice and water regions.}
487 > \end{figure}
488 >
489 >
490  
491   \subsubsection{Orientational Dynamics}
492   The orientational time correlation function,
# Line 617 | Line 641 | location of the interface itself.
641    \lambda=\frac{\eta}{\delta}
642   \end{equation}
643   where $\delta$ is the slip length for the liquid measured at the
644 < location of the interface itself.
644 > location of the interface itself.  In our simulations, the shoulder on
645 > the velocity profile indicating the location of the hydrodynamic
646 > boundary in the liquid is not always apparent. In some cases, the
647 > linear behavior persists nearly up to the interfacial region.  For
648 > this reason, the hydrodynamic position of the boundary is not always
649 > computable, while the Pit approach (Eq. \ref{Pit}) can be used to find
650 > the solid-liquid friction coefficient more reliably.
651  
652 < In both of these expressions, $\eta$ is the shear viscosity of the
653 < bulk-like region of the liquid, a quantity which is easily obtained in
654 < VSS-RNEMD simulations by fitting the velocity profile in the region
655 < far from the surface.\cite{Kuang12} Assuming linear response in the
656 < bulk-like region,
652 > In both the Pit and hydrodynamic boundary expressions, $\eta$ is the
653 > shear viscosity of the bulk-like region of the liquid, a quantity
654 > which is easily obtained in VSS-RNEMD simulations by fitting the
655 > velocity profile in the region far from the surface.\cite{Kuang12}
656 > Assuming linear response in the bulk-like region,
657   \begin{equation}\label{Kuang}
658   j_{z}(p_{x})=-\eta \left(\frac{\partial v_{x}}{\partial z}\right)
659   \end{equation}
# Line 634 | Line 664 | For ice / water interfaces, the boundary conditions ar
664        z}\right) \delta}
665   \end{equation}
666  
667 < For ice / water interfaces, the boundary conditions are markedly
668 < no-slip, so projecting the bulk liquid state velocity profile yields a
669 < negative slip length. This length is the difference between the
670 < structural edge of the ice (determined by the tetrahedrality profile)
671 < and the location where the projected velocity of the bulk liquid
672 < intersects the solid phase velocity (see Figure
673 < \ref{fig:delta_example}). The coefficients of friction for the basal
674 < and the prismatic facets are found to be
675 < 0.07~$\pm$~0.01~amu~fs\textsuperscript{-1} and
646 < 0.032~$\pm$~0.007~amu~fs\textsuperscript{-1}, respectively. These
647 < results may seem surprising as the basal face is smoother than the
648 < prismatic with only small undulations of the oxygen positions, while
649 < the prismatic surface has deep corrugated channels. The applied
650 < momentum flux used in our simulations is parallel to these channels,
651 < however, and this results in a flow of water in the same direction as
652 < the corrugations, allowing water molecules to pass through the
653 < channels during the shear.
667 > For ice / water interfaces, the boundary conditions are no-slip, so
668 > projecting the bulk liquid state velocity profile yields a negative
669 > slip length. This length is the difference between the structural edge
670 > of the ice (determined by the tetrahedrality profile) and the location
671 > where the projected velocity of the bulk liquid intersects the solid
672 > phase velocity (see Figure \ref{fig:delta_example}). The coefficients
673 > of friction for the basal and the prismatic facets were determined for
674 > shearing along both the $x$ and $y$ axes.  The values are given in
675 > table \ref{tab:lambda}.
676  
677 < \begin{figure}
677 > Note that the measured friction coefficient for the basal face is
678 > twice that of the prismatic face (regardless of drag direction).
679 > These results may seem surprising as the basalface appears smoother
680 > than the prismatic with only small undulations of the oxygen
681 > positions, while the prismatic surface has deep corrugated channels
682 > along the $x$ direction in the crystal system used in this work.
683 > However, the corrugations are relatively thin, and the liquid phase
684 > water does not appear to populate the channels.  The prismatic face
685 > therefore effectively presents stripes of solid-phase molecules
686 > (making up approximately half of the exposed surface area) with nearly
687 > empty space between them. The interfacial friction appears to be
688 > independent of the drag direction, so flow parallel to these channels
689 > does not explain the lower friction of the prismatic face.  A more
690 > likely explanation is that the effective contact between the liquid
691 > phase and the prismatic face is reduced by the empty corrugations.  
692 >
693 > \begin{figure}
694   \includegraphics[width=\linewidth]{delta_example}
695   \caption{\label{fig:delta_example} Determining the (negative) slip
696    length ($\delta$) for the ice-water interfaces (which have decidedly
# Line 661 | Line 699 | channels during the shear.
699    profile) and the location where the projected velocity of the bulk
700    liquid (dashed red line) intersects the solid phase velocity (solid
701    black line).  The dotted line indicates the location of the ice as
702 <  determined by the tetrahedrality profile.}
702 >  determined by the tetrahedrality profile.  This example is taken
703 >  from the basal-face simulation with an applied shear rate of XXXX.}
704   \end{figure}
705  
706  
707 + \begin{table}[h]
708 + \centering
709 + \caption{Solid-liquid friction coefficients (measured in amu~fs\textsuperscript{-1}) }
710 + \label{tab:lambda}
711 + \begin{tabular}{|ccc|}  \hline
712 +           & \multicolumn{2}{c|}{Drag direction} \\
713 + Interface & $x$               & $y$  \\ \hline
714 +     basal &  $0.08 \pm 0.02$  & $0.09 \pm 0.03$ \\
715 + prismatic & $0.037 \pm 0.008$ & $0.04 \pm 0.01$ \\ \hline
716 + \end{tabular}
717 + \end{table}
718 +
719 +
720   \section{Conclusion}
721   We have simulated the basal and prismatic facets of an SPC/E model of
722   the ice I$_\mathrm{h}$ / water interface.  Using VSS-RNEMD, the ice

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