ViewVC Help
View File | Revision Log | Show Annotations | View Changeset | Root Listing
root/group/trunk/iceiPaper/iceiPaper.tex
(Generate patch)

Comparing trunk/iceiPaper/iceiPaper.tex (file contents):
Revision 1456 by chrisfen, Tue Sep 14 21:55:24 2004 UTC vs.
Revision 1457 by chrisfen, Tue Sep 14 23:03:53 2004 UTC

# Line 241 | Line 241 | applying a longer cutoff.
241   risk of spontaneous crystallization. However, this risk changes when
242   applying a longer cutoff.
243  
244 + Increasing the cutoff radius in simulations of the more
245 + computationally efficient water models was done in order to evaluate
246 + the trend in free energy values when moving to systems that do not
247 + involve potential truncation. As seen in Fig. \ref{incCutoff}, the
248 + free energy of all the ice polymorphs show a substantial dependence on
249 + cutoff radius. In general, there is a narrowing of the free energy
250 + differences while moving to greater cutoff radius. This trend is much
251 + more subtle in the case of SSD/RF, indicating that the free energies
252 + calculated with a reaction field present provide a more accurate
253 + picture of the free energy landscape in the absence of potential
254 + truncation.
255 +
256 + To further study the changes resulting to the inclusion of a
257 + long-range interaction correction, the effect of an Ewald summation
258 + was estimated by applying the potential energy difference do to its
259 + inclusion in systems in the presence and absence of the
260 + correction. This was accomplished by calculation of the potential
261 + energy of identical crystals with and without PME using TINKER. The
262 + free energies for the investigated polymorphs using the TIP3P and
263 + SPC/E water models are shown in Table \ref{pmeShift}. TIP4P and TIP5P
264 + are not fully supported in TINKER, so the results for these models
265 + could not be estimated. The same trend pointed out through increase of
266 + cutoff radius is observed in these results. Ice-{\it i} is the
267 + preferred polymorph at ambient conditions for both the TIP3P and SPC/E
268 + water models; however, there is a narrowing of the free energy
269 + differences between the various solid forms. In the case of SPC/E this
270 + narrowing is significant enough that it becomes less clear cut that
271 + Ice-{\it i} is the most stable polymorph, and is possibly metastable
272 + with respect to ice B and possibly ice $I_c$. However, these results
273 + do not significantly alter the finding that the Ice-{\it i} polymorph
274 + is a stable crystal structure that should be considered when studying
275 + the phase behavior of water models.
276  
277 + \begin{table*}
278 + \begin{minipage}{\linewidth}
279 + \renewcommand{\thefootnote}{\thempfootnote}
280 + \begin{center}
281 + \caption{The free energy of the studied ice polymorphs after applying the energy difference attributed to the inclusion of the PME long-range interaction correction. Units are kcal/mol.}
282 + \begin{tabular}{ l  c  c  c  c }
283 + \hline \\[-7mm]
284 + \ \ Water Model \ \ & \ \ \ \ \ $I_h$ \ \ & \ \ \ \ \ $I_c$ \ \ & \ \quad \ \ \ \ B \ \ & \ \ \ \ \ Ice-{\it i} \ \ \\
285 + \hline \\[-3mm]
286 + \ \ TIP3P  & \ \ -11.53 & \ \ -11.24 & \ \ -11.51 & \ \ -11.67\\
287 + \ \ SPC/E  & \ \ -12.77 & \ \ -12.92 & \ \ -12.96 & \ \ -13.02\\
288 + \end{tabular}
289 + \label{pmeShift}
290 + \end{center}
291 + \end{minipage}
292 + \end{table*}
293  
294   \section{Conclusions}
295  

Diff Legend

Removed lines
+ Added lines
< Changed lines
> Changed lines