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2 %\documentclass[prb,aps,twocolumn,tabularx]{revtex4}
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6 \usepackage{amsmath}
7 \usepackage{epsf}
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21
22 \begin{document}
23
24 \title{A Free Energy Study of Low Temperature and Anomalous Ice}
25
26 \author{Christopher J. Fennell and J. Daniel Gezelter{\thefootnote}
27 \footnote[1]{Corresponding author. \ Electronic mail: gezelter@nd.edu}}
28
29 \address{Department of Chemistry and Biochemistry\\ University of Notre Dame\\
30 Notre Dame, Indiana 46556}
31
32 \date{\today}
33
34 %\maketitle
35 %\doublespacing
36
37 \begin{abstract}
38 The free energies of several ice polymorphs in the low pressure regime
39 were calculated using thermodynamic integration of systems consisting
40 of a variety of common water models. Ice-{\it i}, a recent
41 computationally observed solid structure, was determined to be the
42 stable state with the lowest free energy for all the water models
43 investigated. Phase diagrams were generated, and melting and boiling
44 points for all the models were determined and show relatively good
45 agreement with experiment, although the solid phase is different
46 between simulation and experiment. In addition, potential truncation
47 was shown to have an effect on the calculated free energies, and may
48 result in altered free energy landscapes.
49 \end{abstract}
50
51 \maketitle
52
53 \newpage
54
55 %\narrowtext
56
57 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
58 % BODY OF TEXT
59 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
60
61 \section{Introduction}
62
63 Molecular dynamics has developed into a valuable tool for studying the
64 phase behavior of systems ranging from small or simple
65 molecules\cite{smallStuff} to complex biological
66 species.\cite{bigStuff} Many techniques have been developed in order
67 to investigate the thermodynamic properites of model substances,
68 providing both qualitative and quantitative comparisons between
69 simulations and experiment.\cite{thermMethods} Investigation of these
70 properties leads to the development of new and more accurate models,
71 leading to better understanding and depiction of physical processes
72 and intricate molecular systems.
73
74 Water has proven to be a challenging substance to depict in
75 simulations, and has resulted in a variety of models that attempt to
76 describe its behavior under a varying simulation
77 conditions.\cite{lotsOfWaterPapers} Many of these models have been
78 used to investigate important physical phenomena like phase
79 transitions and the hydrophobic effect.\cite{evenMorePapers} With the
80 advent of numerous differing models, it is only natural that attention
81 is placed on the properties of the models themselves in an attempt to
82 clarify their benefits and limitations when applied to a system of
83 interest.\cite{modelProps} One important but challenging property to
84 quantify is the free energy, particularly of the solid forms of
85 water. Difficulty in these types of studies typically arises from the
86 assortment of possible crystalline polymorphs that water that water
87 adopts over a wide range of pressures and temperatures. There are
88 currently 13 recognized forms of ice, and it is a challenging task to
89 investigate the entire free energy landscape.\cite{Sanz04} Ideally,
90 research is focused on the phases having the lowest free energy,
91 because these phases will dictate the true transition temperatures and
92 pressures for their respective model.
93
94 In this paper, standard reference state methods were applied to the
95 study of crystalline water polymorphs in the low pressure regime. This
96 work is unique in the fact that one of the crystal lattices was
97 arrived at through crystallization of a computationally efficient
98 water model under constant pressure and temperature
99 conditions. Crystallization events are interesting in and of
100 themselves\cite{nucleationStudies}; however, the crystal structure
101 obtained in this case was different from any previously observed ice
102 polymorphs, in experiment or simulation.\cite{Fennell04} This crystal
103 was termed Ice-{\it i} in homage to its origin in computational
104 simulation. The unit cell (Fig. \ref{iceiCell}A) consists of eight
105 water molecules that stack in rows of interlocking water
106 tetramers. Proton ordering can be accomplished by orienting two of the
107 waters so that both of their donated hydrogen bonds are internal to
108 their tetramer (Fig. \ref{protOrder}). As expected in an ice crystal
109 constructed of water tetramers, the hydrogen bonds are not as linear
110 as those observed in ice $I_h$, however the interlocking of these
111 subunits appears to provide significant stabilization to the overall
112 crystal. The arrangement of these tetramers results in surrounding
113 open octagonal cavities that are typically greater than 6.3 \AA\ in
114 diameter. This relatively open overall structure leads to crystals
115 that are 0.07 g/cm$^3$ less dense on average than ice $I_h$.
116
117 Results in the previous study indicated that Ice-{\it i} is the
118 minimum energy crystal structure for the single point water models
119 being studied (for discussions on these single point dipole models,
120 see the previous work and related
121 articles\cite{Fennell04,Ichiye96,Bratko85}). Those results only
122 consider energetic stabilization and neglect entropic contributions to
123 the overall free energy. To address this issue, the absolute free
124 energy of this crystal was calculated using thermodynamic integration
125 and compared to the free energies of cubic and hexagonal ice $I$ (the
126 experimental low density ice polymorphs) and ice B (a higher density,
127 but very stable crystal structure observed by B\`{a}ez and Clancy in
128 free energy studies of SPC/E).\cite{Baez95b} This work includes
129 results for the water model from which Ice-{\it i} was crystallized
130 (soft sticky dipole extended, SSD/E) in addition to several common
131 water models (TIP3P, TIP4P, TIP5P, and SPC/E) and a reaction field
132 parametrized single point dipole water model (soft sticky dipole
133 reaction field, SSD/RF). In should be noted that a second version of
134 Ice-{\it i} (Ice-2{\it i}) was used in calculations involving SPC/E,
135 TIP4P, and TIP5P. The unit cell of this crystal (Fig. \ref{iceiCell}B)
136 is similar to the Ice-{\it i} unit it is extended in the direction of
137 the (001) face and compressed along the other two faces.
138
139 \section{Methods}
140
141 Canonical ensemble (NVT) molecular dynamics calculations were
142 performed using the OOPSE (Object-Oriented Parallel Simulation Engine)
143 molecular mechanics package. All molecules were treated as rigid
144 bodies, with orientational motion propagated using the symplectic DLM
145 integration method. Details about the implementation of these
146 techniques can be found in a recent publication.\cite{Meineke05}
147
148 Thermodynamic integration was utilized to calculate the free energy of
149 several ice crystals at 200 K using the TIP3P, TIP4P, TIP5P, SPC/E,
150 SSD/RF, and SSD/E water models. Liquid state free energies at 300 and
151 400 K for all of these water models were also determined using this
152 same technique, in order to determine melting points and generate
153 phase diagrams. All simulations were carried out at densities
154 resulting in a pressure of approximately 1 atm at their respective
155 temperatures.
156
157 A single thermodynamic integration involves a sequence of simulations
158 over which the system of interest is converted into a reference system
159 for which the free energy is known. This transformation path is then
160 integrated in order to determine the free energy difference between
161 the two states:
162 \begin{equation}
163 \Delta A = \int_0^1\left\langle\frac{\partial V(\lambda
164 )}{\partial\lambda}\right\rangle_\lambda d\lambda,
165 \end{equation}
166 where $V$ is the interaction potential and $\lambda$ is the
167 transformation parameter that scales the overall
168 potential. Simulations are distributed unevenly along this path in
169 order to sufficiently sample the regions of greatest change in the
170 potential. Typical integrations in this study consisted of $\sim$25
171 simulations ranging from 300 ps (for the unaltered system) to 75 ps
172 (near the reference state) in length.
173
174 For the thermodynamic integration of molecular crystals, the Einstein
175 Crystal is chosen as the reference state that the system is converted
176 to over the course of the simulation. In an Einstein Crystal, the
177 molecules are harmonically restrained at their ideal lattice locations
178 and orientations. The partition function for a molecular crystal
179 restrained in this fashion has been evaluated, and the Helmholtz Free
180 Energy ({\it A}) is given by
181 \begin{eqnarray}
182 A = E_m\ -\ kT\ln \left (\frac{kT}{h\nu}\right )^3&-&kT\ln \left
183 [\pi^\frac{1}{2}\left (\frac{8\pi^2I_\mathrm{A}kT}{h^2}\right
184 )^\frac{1}{2}\left (\frac{8\pi^2I_\mathrm{B}kT}{h^2}\right
185 )^\frac{1}{2}\left (\frac{8\pi^2I_\mathrm{C}kT}{h^2}\right
186 )^\frac{1}{2}\right ] \nonumber \\ &-& kT\ln \left [\frac{kT}{2(\pi
187 K_\omega K_\theta)^{\frac{1}{2}}}\exp\left
188 (-\frac{kT}{2K_\theta}\right)\int_0^{\left (\frac{kT}{2K_\theta}\right
189 )^\frac{1}{2}}\exp(t^2)\mathrm{d}t\right ],
190 \label{ecFreeEnergy}
191 \end{eqnarray}
192 where $2\pi\nu = (K_\mathrm{v}/m)^{1/2}$.\cite{Baez95a} In equation
193 \ref{ecFreeEnergy}, $K_\mathrm{v}$, $K_\mathrm{\theta}$, and
194 $K_\mathrm{\omega}$ are the spring constants restraining translational
195 motion and deflection of and rotation around the principle axis of the
196 molecule respectively (Fig. \ref{waterSpring}), and $E_m$ is the
197 minimum potential energy of the ideal crystal. In the case of
198 molecular liquids, the ideal vapor is chosen as the target reference
199 state.
200 \begin{figure}
201 \includegraphics[scale=1.0]{rotSpring.eps}
202 \caption{Possible orientational motions for a restrained molecule.
203 $\theta$ angles correspond to displacement from the body-frame {\it
204 z}-axis, while $\omega$ angles correspond to rotation about the
205 body-frame {\it z}-axis. $K_\theta$ and $K_\omega$ are spring
206 constants for the harmonic springs restraining motion in the $\theta$
207 and $\omega$ directions.}
208 \label{waterSpring}
209 \end{figure}
210
211 Charge, dipole, and Lennard-Jones interactions were modified by a
212 cubic switching between 100\% and 85\% of the cutoff value (9 \AA ). By
213 applying this function, these interactions are smoothly truncated,
214 thereby avoiding poor energy conserving dynamics resulting from
215 harsher truncation schemes. The effect of a long-range correction was
216 also investigated on select model systems in a variety of manners. For
217 the SSD/RF model, a reaction field with a fixed dielectric constant of
218 80 was applied in all simulations.\cite{Onsager36} For a series of the
219 least computationally expensive models (SSD/E, SSD/RF, and TIP3P),
220 simulations were performed with longer cutoffs of 12 and 15 \AA\ to
221 compare with the 9 \AA\ cutoff results. Finally, results from the use
222 of an Ewald summation were estimated for TIP3P and SPC/E by performing
223 calculations with Particle-Mesh Ewald (PME) in the TINKER molecular
224 mechanics software package. TINKER was chosen because it can also
225 propagate the motion of rigid-bodies, and provides the most direct
226 comparison to the results from OOPSE. The calculated energy difference
227 in the presence and absence of PME was applied to the previous results
228 in order to predict changes in the free energy landscape.
229
230 \section{Results and discussion}
231
232 The free energy of proton ordered Ice-{\it i} was calculated and
233 compared with the free energies of proton ordered variants of the
234 experimentally observed low-density ice polymorphs, $I_h$ and $I_c$,
235 as well as the higher density ice B, observed by B\`{a}ez and Clancy
236 and thought to be the minimum free energy structure for the SPC/E
237 model at ambient conditions (Table \ref{freeEnergy}).\cite{Baez95b}
238 Ice XI, the experimentally observed proton ordered variant of ice
239 $I_h$, was investigated initially, but it was found not to be as
240 stable as antiferroelectric variants of proton ordered or even proton
241 disordered ice$I_h$.\cite{Davidson84} The proton ordered variant of
242 ice $I_h$ used here is a simple antiferroelectric version that has an
243 8 molecule unit cell. The crystals contained 648 or 1728 molecules for
244 ice B, 1024 or 1280 molecules for ice $I_h$, 1000 molecules for ice
245 $I_c$, or 1024 molecules for Ice-{\it i}. The larger crystal sizes
246 were necessary for simulations involving larger cutoff values.
247
248 \begin{table*}
249 \begin{minipage}{\linewidth}
250 \renewcommand{\thefootnote}{\thempfootnote}
251 \begin{center}
252 \caption{Calculated free energies for several ice polymorphs with a
253 variety of common water models. All calculations used a cutoff radius
254 of 9 \AA\ and were performed at 200 K and $\sim$1 atm. Units are
255 kcal/mol. *Ice $I_c$ is unstable at 200 K using SSD/RF.}
256 \begin{tabular}{ l c c c c }
257 \hline \\[-7mm]
258 \ \quad \ Water Model\ \ & \ \quad \ \ \ \ $I_h$ \ \ & \ \quad \ \ \ \ $I_c$ \ \ & \ \quad \ \ \ \ B \ \ & \ \quad \ \ \ Ice-{\it i} \ \quad \ \\
259 \hline \\[-3mm]
260 \ \quad \ TIP3P & \ \quad \ -11.41 & \ \quad \ -11.23 & \ \quad \ -11.82 & \quad -12.30\\
261 \ \quad \ TIP4P & \ \quad \ -11.84 & \ \quad \ -12.04 & \ \quad \ -12.08 & \quad -12.33\\
262 \ \quad \ TIP5P & \ \quad \ -11.85 & \ \quad \ -11.86 & \ \quad \ -11.96 & \quad -12.29\\
263 \ \quad \ SPC/E & \ \quad \ -12.67 & \ \quad \ -12.96 & \ \quad \ -13.25 & \quad -13.55\\
264 \ \quad \ SSD/E & \ \quad \ -11.27 & \ \quad \ -11.19 & \ \quad \ -12.09 & \quad -12.54\\
265 \ \quad \ SSD/RF & \ \quad \ -11.51 & \ \quad \ NA* & \ \quad \ -12.08 & \quad -12.29\\
266 \end{tabular}
267 \label{freeEnergy}
268 \end{center}
269 \end{minipage}
270 \end{table*}
271
272 The free energy values computed for the studied polymorphs indicate
273 that Ice-{\it i} is the most stable state for all of the common water
274 models studied. With the free energy at these state points, the
275 temperature and pressure dependence of the free energy was used to
276 project to other state points and build phase diagrams. Figures
277 \ref{tp3phasedia} and \ref{ssdrfphasedia} are example diagrams built
278 from the free energy results. All other models have similar structure,
279 only the crossing points between these phases exist at different
280 temperatures and pressures. It is interesting to note that ice $I$
281 does not exist in either cubic or hexagonal form in any of the phase
282 diagrams for any of the models. For purposes of this study, ice B is
283 representative of the dense ice polymorphs. A recent study by Sanz
284 {\it et al.} goes into detail on the phase diagrams for SPC/E and
285 TIP4P in the high pressure regime.\cite{Sanz04}
286 \begin{figure}
287 \includegraphics[width=\linewidth]{tp3PhaseDia.eps}
288 \caption{Phase diagram for the TIP3P water model in the low pressure
289 regime. The displayed $T_m$ and $T_b$ values are good predictions of
290 the experimental values; however, the solid phases shown are not the
291 experimentally observed forms. Both cubic and hexagonal ice $I$ are
292 higher in energy and don't appear in the phase diagram.}
293 \label{tp3phasedia}
294 \end{figure}
295 \begin{figure}
296 \includegraphics[width=\linewidth]{ssdrfPhaseDia.eps}
297 \caption{Phase diagram for the SSD/RF water model in the low pressure
298 regime. Calculations producing these results were done under an
299 applied reaction field. It is interesting to note that this
300 computationally efficient model (over 3 times more efficient than
301 TIP3P) exhibits phase behavior similar to the less computationally
302 conservative charge based models.}
303 \label{ssdrfphasedia}
304 \end{figure}
305
306 \begin{table*}
307 \begin{minipage}{\linewidth}
308 \renewcommand{\thefootnote}{\thempfootnote}
309 \begin{center}
310 \caption{Melting ($T_m$), boiling ($T_b$), and sublimation ($T_s$)
311 temperatures of several common water models compared with experiment.}
312 \begin{tabular}{ l c c c c c c c }
313 \hline \\[-7mm]
314 \ \ Equilibria Point\ \ & \ \ \ \ \ TIP3P \ \ & \ \ \ \ \ TIP4P \ \ & \ \quad \ \ \ \ TIP5P \ \ & \ \ \ \ \ SPC/E \ \ & \ \ \ \ \ SSD/E \ \ & \ \ \ \ \ SSD/RF \ \ & \ \ \ \ \ Exp. \ \ \\
315 \hline \\[-3mm]
316 \ \ $T_m$ (K) & \ \ 269 & \ \ 265 & \ \ 271 & 297 & \ \ - & \ \ 278 & \ \ 273\\
317 \ \ $T_b$ (K) & \ \ 357 & \ \ 354 & \ \ 337 & 396 & \ \ - & \ \ 349 & \ \ 373\\
318 \ \ $T_s$ (K) & \ \ - & \ \ - & \ \ - & - & \ \ 355 & \ \ - & \ \ -\\
319 \end{tabular}
320 \label{meltandboil}
321 \end{center}
322 \end{minipage}
323 \end{table*}
324
325 Table \ref{meltandboil} lists the melting and boiling temperatures
326 calculated from this work. Surprisingly, most of these models have
327 melting points that compare quite favorably with experiment. The
328 unfortunate aspect of this result is that this phase change occurs
329 between Ice-{\it i} and the liquid state rather than ice $I_h$ and the
330 liquid state. These results are actually not contrary to previous
331 studies in the literature. Earlier free energy studies of ice $I$
332 using TIP4P predict a $T_m$ ranging from 214 to 238 K (differences
333 being attributed to choice of interaction truncation and different
334 ordered and disordered molecular arrangements). If the presence of ice
335 B and Ice-{\it i} were omitted, a $T_m$ value around 210 K would be
336 predicted from this work. However, the $T_m$ from Ice-{\it i} is
337 calculated at 265 K, significantly higher in temperature than the
338 previous studies. Also of interest in these results is that SSD/E does
339 not exhibit a melting point at 1 atm, but it shows a sublimation point
340 at 355 K. This is due to the significant stability of Ice-{\it i} over
341 all other polymorphs for this particular model under these
342 conditions. While troubling, this behavior turned out to be
343 advantageous in that it facilitated the spontaneous crystallization of
344 Ice-{\it i}. These observations provide a warning that simulations of
345 SSD/E as a ``liquid'' near 300 K are actually metastable and run the
346 risk of spontaneous crystallization. However, this risk changes when
347 applying a longer cutoff.
348
349 \begin{figure}
350 \includegraphics[width=\linewidth]{cutoffChange.eps}
351 \caption{Free energy as a function of cutoff radius for (A) SSD/E, (B)
352 TIP3P, and (C) SSD/RF. Data points omitted include SSD/E: $I_c$ 12
353 \AA\, TIP3P: $I_c$ 12 \AA\ and B 12 \AA\, and SSD/RF: $I_c$ 9
354 \AA\. These crystals are unstable at 200 K and rapidly convert into a
355 liquid. The connecting lines are qualitative visual aid.}
356 \label{incCutoff}
357 \end{figure}
358
359 Increasing the cutoff radius in simulations of the more
360 computationally efficient water models was done in order to evaluate
361 the trend in free energy values when moving to systems that do not
362 involve potential truncation. As seen in Fig. \ref{incCutoff}, the
363 free energy of all the ice polymorphs show a substantial dependence on
364 cutoff radius. In general, there is a narrowing of the free energy
365 differences while moving to greater cutoff radius. Interestingly, by
366 increasing the cutoff radius, the free energy gap was narrowed enough
367 in the SSD/E model that the liquid state is preferred under standard
368 simulation conditions (298 K and 1 atm). Thus, it is recommended that
369 simulations using this model choose interaction truncation radii
370 greater than 9 \AA\. This narrowing trend is much more subtle in the
371 case of SSD/RF, indicating that the free energies calculated with a
372 reaction field present provide a more accurate picture of the free
373 energy landscape in the absence of potential truncation.
374
375 To further study the changes resulting to the inclusion of a
376 long-range interaction correction, the effect of an Ewald summation
377 was estimated by applying the potential energy difference do to its
378 inclusion in systems in the presence and absence of the
379 correction. This was accomplished by calculation of the potential
380 energy of identical crystals with and without PME using TINKER. The
381 free energies for the investigated polymorphs using the TIP3P and
382 SPC/E water models are shown in Table \ref{pmeShift}. TIP4P and TIP5P
383 are not fully supported in TINKER, so the results for these models
384 could not be estimated. The same trend pointed out through increase of
385 cutoff radius is observed in these PME results. Ice-{\it i} is the
386 preferred polymorph at ambient conditions for both the TIP3P and SPC/E
387 water models; however, there is a narrowing of the free energy
388 differences between the various solid forms. In the case of SPC/E this
389 narrowing is significant enough that it becomes less clear cut that
390 Ice-{\it i} is the most stable polymorph, and is possibly metastable
391 with respect to ice B and possibly ice $I_c$. However, these results
392 do not significantly alter the finding that the Ice-{\it i} polymorph
393 is a stable crystal structure that should be considered when studying
394 the phase behavior of water models.
395
396 \begin{table*}
397 \begin{minipage}{\linewidth}
398 \renewcommand{\thefootnote}{\thempfootnote}
399 \begin{center}
400 \caption{The free energy of the studied ice polymorphs after applying
401 the energy difference attributed to the inclusion of the PME
402 long-range interaction correction. Units are kcal/mol.}
403 \begin{tabular}{ l c c c c }
404 \hline \\[-7mm]
405 \ \ Water Model \ \ & \ \ \ \ \ $I_h$ \ \ & \ \ \ \ \ $I_c$ \ \ & \ \quad \ \ \ \ B \ \ & \ \ \ \ \ Ice-{\it i} \ \ \\
406 \hline \\[-3mm]
407 \ \ TIP3P & \ \ -11.53 & \ \ -11.24 & \ \ -11.51 & \ \ -11.67\\
408 \ \ SPC/E & \ \ -12.77 & \ \ -12.92 & \ \ -12.96 & \ \ -13.02\\
409 \end{tabular}
410 \label{pmeShift}
411 \end{center}
412 \end{minipage}
413 \end{table*}
414
415 \section{Conclusions}
416
417 The free energy for proton ordered variants of hexagonal and cubic ice
418 $I$, ice B, and recently discovered Ice-{\it i} where calculated under
419 standard conditions for several common water models via thermodynamic
420 integration. All the water models studied show Ice-{\it i} to be the
421 minimum free energy crystal structure in the with a 9 \AA\ switching
422 function cutoff. Calculated melting and boiling points show
423 surprisingly good agreement with the experimental values; however, the
424 solid phase at 1 atm is Ice-{\it i}, not ice $I_h$. The effect of
425 interaction truncation was investigated through variation of the
426 cutoff radius, use of a reaction field parameterized model, and
427 estimation of the results in the presence of the Ewald summation
428 correction. Interaction truncation has a significant effect on the
429 computed free energy values, and may significantly alter the free
430 energy landscape for the more complex multipoint water models. Despite
431 these effects, these results show Ice-{\it i} to be an important ice
432 polymorph that should be considered in simulation studies.
433
434 Due to this relative stability of Ice-{\it i} in all manner of
435 investigated simulation examples, the question arises as to possible
436 experimental observation of this polymorph. The rather extensive past
437 and current experimental investigation of water in the low pressure
438 regime leads the authors to be hesitant in ascribing relevance outside
439 of computational models, hence the descriptive name presented. That
440 being said, there are certain experimental conditions that would
441 provide the most ideal situation for possible observation. These
442 include the negative pressure or stretched solid regime, small
443 clusters in vacuum deposition environments, and in clathrate
444 structures involving small non-polar molecules.
445
446 \section{Acknowledgments}
447 Support for this project was provided by the National Science
448 Foundation under grant CHE-0134881. Computation time was provided by
449 the Notre Dame High Performance Computing Cluster and the Notre Dame
450 Bunch-of-Boxes (B.o.B) computer cluster (NSF grant DMR-0079647).
451
452 \newpage
453
454 \bibliographystyle{jcp}
455 \bibliography{iceiPaper}
456
457
458 \end{document}