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20 \begin{document}
21
22 \title{Computational free energy studies of a new ice polymorph which
23 exhibits greater stability than Ice $I_h$}
24
25 \author{Christopher J. Fennell and J. Daniel Gezelter \\
26 Department of Chemistry and Biochemistry\\
27 University of Notre Dame\\
28 Notre Dame, Indiana 46556}
29
30 \date{\today}
31
32 \maketitle
33 %\doublespacing
34
35 \begin{abstract}
36 The absolute free energies of several ice polymorphs were calculated
37 using thermodynamic integration. These polymorphs are predicted by
38 computer simulations using a variety of common water models to be
39 stable at low pressures. A recently discovered ice polymorph that has
40 as yet {\it only} been observed in computer simulations (Ice-{\it i}),
41 was determined to be the stable crystalline state for {\it all} the
42 water models investigated. Phase diagrams were generated, and phase
43 coexistence lines were determined for all of the known low-pressure
44 ice structures. Additionally, potential truncation was shown to play
45 a role in the resulting shape of the free energy landscape.
46 \end{abstract}
47
48 %\narrowtext
49
50 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
51 % BODY OF TEXT
52 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
53
54 \section{Introduction}
55
56 Water has proven to be a challenging substance to depict in
57 simulations, and a variety of models have been developed to describe
58 its behavior under varying simulation
59 conditions.\cite{Stillinger74,Rahman75,Berendsen81,Jorgensen83,Bratko85,Berendsen87,Caldwell95,Liu96,Berendsen98,Dill00,Mahoney00,Fennell04}
60 These models have been used to investigate important physical
61 phenomena like phase transitions, transport properties, and the
62 hydrophobic effect.\cite{Yamada02,Marrink94,Gallagher03} With the
63 choice of models available, it is only natural to compare the models
64 under interesting thermodynamic conditions in an attempt to clarify
65 the limitations of
66 each.\cite{Jorgensen83,Jorgensen98b,Clancy94,Mahoney01} Two important
67 properties to quantify are the Gibbs and Helmholtz free energies,
68 particularly for the solid forms of water as these predict the
69 thermodynamic stability of the various phases. Water has a
70 particularly rich phase diagram and takes on a number of different and
71 stable crystalline structures as the temperature and pressure are
72 varied. It is a challenging task to investigate the entire free
73 energy landscape\cite{Sanz04}; and ideally, research is focused on the
74 phases having the lowest free energy at a given state point, because
75 these phases will dictate the relevant transition temperatures and
76 pressures for the model.
77
78 The high-pressure phases of water (ice II - ice X as well as ice XII)
79 have been studied extensively both experimentally and
80 computationally. In this paper, standard reference state methods were
81 applied in the {\it low} pressure regime to evaluate the free energies
82 for a few known crystalline water polymorphs that might be stable at
83 these pressures. This work is unique in that one of the crystal
84 lattices was arrived at through crystallization of a computationally
85 efficient water model under constant pressure and temperature
86 conditions. Crystallization events are interesting in and of
87 themselves\cite{Matsumoto02,Yamada02}; however, the crystal structure
88 obtained in this case is different from any previously observed ice
89 polymorphs in experiment or simulation.\cite{Fennell04} We have named
90 this structure Ice-{\it i} to indicate its origin in computational
91 simulation. The unit cell of Ice-{\it i} and an axially-elongated
92 variant named Ice-{\it i}$^\prime$ both consist of eight water
93 molecules that stack in rows of interlocking water tetramers as
94 illustrated in figures \ref{unitcell}A and \ref{unitcell}B. These
95 tetramers form a crystal structure similar in appearance to a recent
96 two-dimensional surface tessellation simulated on silica.\cite{Yang04}
97 As expected in an ice crystal constructed of water tetramers, the
98 hydrogen bonds are not as linear as those observed in ice $I_h$,
99 however the interlocking of these subunits appears to provide
100 significant stabilization to the overall crystal. The arrangement of
101 these tetramers results in octagonal cavities that are typically
102 greater than 6.3 \AA\ in diameter (Fig. \ref{iCrystal}). This open
103 structure leads to crystals that are typically 0.07 g/cm$^3$ less
104 dense than ice $I_h$.
105
106 \begin{figure}
107 \centering
108 \includegraphics[width=\linewidth]{unitCell.eps}
109 \caption{(A) Unit cells for Ice-{\it i} and (B) Ice-{\it i}$^\prime$.
110 The spheres represent the center-of-mass locations of the water
111 molecules. The $a$ to $c$ ratios for Ice-{\it i} and Ice-{\it
112 i}$^\prime$ are given by 2.1214 and 1.785 respectively.}
113 \label{unitcell}
114 \end{figure}
115
116 \begin{figure}
117 \centering
118 \includegraphics[width=\linewidth]{orderedIcei.eps}
119 \caption{A rendering of a proton ordered crystal of Ice-{\it i} looking
120 down the (001) crystal face. The presence of large octagonal pores
121 leads to a polymorph that is less dense than ice $I_h$.}
122 \label{iCrystal}
123 \end{figure}
124
125 Results from our previous study indicated that Ice-{\it i} is the
126 minimum energy crystal structure for the single point water models
127 investigated (for discussions on these single point dipole models, see
128 our previous work and related
129 articles).\cite{Fennell04,Liu96,Bratko85} Our earlier results
130 considered only energetic stabilization and neglected entropic
131 contributions to the overall free energy. To address this issue, we
132 have calculated the absolute free energy of this crystal using
133 thermodynamic integration and compared it to the free energies of ice
134 $I_c$ and ice $I_h$ (the common low density ice polymorphs) and ice B
135 (a higher density, but very stable crystal structure observed by
136 B\`{a}ez and Clancy in free energy studies of SPC/E).\cite{Baez95b}
137 This work includes results for the water model from which Ice-{\it i}
138 was crystallized (SSD/E) in addition to several common water models
139 (TIP3P, TIP4P, TIP5P, and SPC/E) and a reaction field parametrized
140 single point dipole water model (SSD/RF). The axially-elongated
141 variant, Ice-{\it i}$^\prime$, was used in calculations involving
142 SPC/E, TIP4P, and TIP5P. The square tetramers in Ice-{\it i} distort
143 in Ice-{\it i}$^\prime$ to form a rhombus with alternating 85 and 95
144 degree angles. Under SPC/E, TIP4P, and TIP5P, this geometry is better
145 at forming favorable hydrogen bonds. The degree of rhomboid
146 distortion depends on the water model used, but is significant enough
147 to split a peak in the radial distribution function which corresponds
148 to diagonal sites in the tetramers.
149
150 \section{Methods}
151
152 Canonical ensemble (NVT) molecular dynamics calculations were
153 performed using the OOPSE molecular mechanics program.\cite{Meineke05}
154 All molecules were treated as rigid bodies, with orientational motion
155 propagated using the symplectic DLM integration method. Details about
156 the implementation of this technique can be found in a recent
157 publication.\cite{Dullweber1997}
158
159 Thermodynamic integration was utilized to calculate the Helmholtz free
160 energies ($A$) of the listed water models at various state points
161 using the OOPSE molecular dynamics program.\cite{Meineke05}
162 Thermodynamic integration is an established technique that has been
163 used extensively in the calculation of free energies for condensed
164 phases of
165 materials.\cite{Frenkel84,Hermens88,Meijer90,Baez95a,Vlot99}. This
166 method uses a sequence of simulations during which the system of
167 interest is converted into a reference system for which the free
168 energy is known analytically ($A_0$). The difference in potential
169 energy between the reference system and the system of interest
170 ($\Delta V$) is then integrated in order to determine the free energy
171 difference between the two states:
172 \begin{equation}
173 A = A_0 + \int_0^1 \left\langle \Delta V \right\rangle_\lambda d\lambda.
174 \end{equation}
175 Here, $\lambda$ is the parameter that governs the transformation
176 between the reference system and the system of interest. For
177 crystalline phases, an harmonically-restrained (Einsten) crystal is
178 chosen as the reference state, while for liquid phases, the ideal gas
179 is taken as the reference state.
180
181 In an Einstein crystal, the molecules are restrained at their ideal
182 lattice locations and orientations. Using harmonic restraints, as
183 applied by B\`{a}ez and Clancy, the total potential for this reference
184 crystal ($V_\mathrm{EC}$) is the sum of all the harmonic restraints,
185 \begin{equation}
186 V_\mathrm{EC} = \frac{K_\mathrm{v}r^2}{2} + \frac{K_\theta\theta^2}{2} +
187 \frac{K_\omega\omega^2}{2},
188 \end{equation}
189 where $K_\mathrm{v}$, $K_\mathrm{\theta}$, and $K_\mathrm{\omega}$ are
190 the spring constants restraining translational motion and deflection
191 of and rotation around the principle axis of the molecule
192 respectively. These spring constants are typically calculated from
193 the mean-square displacements of water molecules in an unrestrained
194 ice crystal at 200 K. For these studies, $K_\mathrm{r} = 4.29$ kcal
195 mol$^{-1}$, $K_\theta\ = 13.88$ kcal mol$^{-1}$, and $K_\omega\ =
196 17.75$ kcal mol$^{-1}$. It is clear from Fig. \ref{waterSpring} that
197 the values of $\theta$ range from $0$ to $\pi$, while $\omega$ ranges
198 from $-\pi$ to $\pi$. The partition function for a molecular crystal
199 restrained in this fashion can be evaluated analytically, and the
200 Helmholtz Free Energy ({\it A}) is given by
201 \begin{eqnarray}
202 A = E_m\ -\ kT\ln \left (\frac{kT}{h\nu}\right )^3&-&kT\ln \left
203 [\pi^\frac{1}{2}\left (\frac{8\pi^2I_\mathrm{A}kT}{h^2}\right
204 )^\frac{1}{2}\left (\frac{8\pi^2I_\mathrm{B}kT}{h^2}\right
205 )^\frac{1}{2}\left (\frac{8\pi^2I_\mathrm{C}kT}{h^2}\right
206 )^\frac{1}{2}\right ] \nonumber \\ &-& kT\ln \left [\frac{kT}{2(\pi
207 K_\omega K_\theta)^{\frac{1}{2}}}\exp\left
208 (-\frac{kT}{2K_\theta}\right)\int_0^{\left (\frac{kT}{2K_\theta}\right
209 )^\frac{1}{2}}\exp(t^2)\mathrm{d}t\right ],
210 \label{ecFreeEnergy}
211 \end{eqnarray}
212 where $2\pi\nu = (K_\mathrm{v}/m)^{1/2}$, and $E_m$ is the minimum
213 potential energy of the ideal crystal.\cite{Baez95a}
214
215 \begin{figure}
216 \centering
217 \includegraphics[width=4in]{rotSpring.eps}
218 \caption{Possible orientational motions for a restrained molecule.
219 $\theta$ angles correspond to displacement from the body-frame {\it
220 z}-axis, while $\omega$ angles correspond to rotation about the
221 body-frame {\it z}-axis. $K_\theta$ and $K_\omega$ are spring
222 constants for the harmonic springs restraining motion in the $\theta$
223 and $\omega$ directions.}
224 \label{waterSpring}
225 \end{figure}
226
227 In the case of molecular liquids, the ideal vapor is chosen as the
228 target reference state. There are several examples of liquid state
229 free energy calculations of water models present in the
230 literature.\cite{Hermens88,Quintana92,Mezei92,Baez95b} These methods
231 typically differ in regard to the path taken for switching off the
232 interaction potential to convert the system to an ideal gas of water
233 molecules. In this study, we applied one of the most convenient
234 methods and integrated over the $\lambda^4$ path, where all
235 interaction parameters are scaled equally by this transformation
236 parameter. This method has been shown to be reversible and provide
237 results in excellent agreement with other established
238 methods.\cite{Baez95b}
239
240 Near the cutoff radius ($0.85 * r_{cut}$), charge, dipole, and
241 Lennard-Jones interactions were gradually reduced by a cubic switching
242 function. By applying this function, these interactions are smoothly
243 truncated, thereby avoiding the poor energy conservation which results
244 from harsher truncation schemes. The effect of a long-range
245 correction was also investigated on select model systems in a variety
246 of manners. For the SSD/RF model, a reaction field with a fixed
247 dielectric constant of 80 was applied in all
248 simulations.\cite{Onsager36} For a series of the least computationally
249 expensive models (SSD/E, SSD/RF, TIP3P, and SPC/E), simulations were
250 performed with longer cutoffs of 10.5, 12, 13.5, and 15 \AA\ to
251 compare with the 9 \AA\ cutoff results. Finally, the effects of using
252 the Ewald summation were estimated for TIP3P and SPC/E by performing
253 single configuration Particle-Mesh Ewald (PME)
254 calculations~\cite{Tinker} for each of the ice polymorphs. The
255 calculated energy difference in the presence and absence of PME was
256 applied to the previous results in order to predict changes to the
257 free energy landscape.
258
259 \section{Results and Discussion}
260
261 The calculated free energies of proton-ordered variants of three low
262 density polymorphs ($I_h$, $I_c$, and Ice-{\it i} or Ice-{\it
263 i}$^\prime$) and the stable higher density ice B are listed in Table
264 \ref{freeEnergy}. Ice B was included because it has been
265 shown to be a minimum free energy structure for SPC/E at ambient
266 conditions.\cite{Baez95b} In addition to the free energies, the
267 relevant transition temperatures at standard pressure are also
268 displayed in Table \ref{freeEnergy}. These free energy values
269 indicate that Ice-{\it i} is the most stable state for all of the
270 investigated water models. With the free energy at these state
271 points, the Gibbs-Helmholtz equation was used to project to other
272 state points and to build phase diagrams. Figure \ref{tp3PhaseDia} is
273 an example diagram built from the results for the TIP3P water model.
274 All other models have similar structure, although the crossing points
275 between the phases move to different temperatures and pressures as
276 indicated from the transition temperatures in Table \ref{freeEnergy}.
277 It is interesting to note that ice $I_h$ (and ice $I_c$ for that
278 matter) do not appear in any of the phase diagrams for any of the
279 models. For purposes of this study, ice B is representative of the
280 dense ice polymorphs. A recent study by Sanz {\it et al.} provides
281 details on the phase diagrams for SPC/E and TIP4P at higher pressures
282 than those studied here.\cite{Sanz04}
283
284 \begin{table*}
285 \begin{minipage}{\linewidth}
286 \begin{center}
287 \caption{Calculated free energies for several ice polymorphs along
288 with the calculated melting (or sublimation) and boiling points for
289 the investigated water models. All free energy calculations used a
290 cutoff radius of 9.0 \AA\ and were performed at 200 K and $\sim$1 atm.
291 Units of free energy are kcal/mol, while transition temperature are in
292 Kelvin. Calculated error of the final digits is in parentheses.}
293 \begin{tabular}{lccccccc}
294 \hline
295 Water Model & $I_h$ & $I_c$ & B & Ice-{\it i} & Ice-{\it i}$^\prime$ & $T_m$ (*$T_s$) & $T_b$\\
296 \hline
297 TIP3P & -11.41(2) & -11.23(3) & -11.82(3) & -12.30(3) & - & 269(4) & 357(2)\\
298 TIP4P & -11.84(3) & -12.04(2) & -12.08(3) & - & -12.33(3) & 266(5) & 354(2)\\
299 TIP5P & -11.85(3) & -11.86(2) & -11.96(2) & - & -12.29(2) & 271(4) & 337(2)\\
300 SPC/E & -12.87(2) & -13.05(2) & -13.26(3) & - & -13.55(2) & 296(3) & 396(2)\\
301 SSD/E & -11.27(2) & -11.19(4) & -12.09(2) & -12.54(2) & - & *355(2) & -\\
302 SSD/RF & -11.51(2) & -11.47(2) & -12.08(3) & -12.29(2) & - & 278(4) & 349(2)\\
303 \end{tabular}
304 \label{freeEnergy}
305 \end{center}
306 \end{minipage}
307 \end{table*}
308
309 \begin{figure}
310 \includegraphics[width=\linewidth]{tp3PhaseDia.eps}
311 \caption{Phase diagram for the TIP3P water model in the low pressure
312 regime. The displayed $T_m$ and $T_b$ values are good predictions of
313 the experimental values; however, the solid phases shown are not the
314 experimentally observed forms. Both cubic and hexagonal ice $I$ are
315 higher in energy and don't appear in the phase diagram.}
316 \label{tp3PhaseDia}
317 \end{figure}
318
319 Most of the water models have melting points that compare quite
320 favorably with the experimental value of 273 K. The unfortunate
321 aspect of this result is that this phase change occurs between
322 Ice-{\it i} and the liquid state rather than ice $I_h$ and the liquid
323 state. These results do not contradict other studies. Studies of ice
324 $I_h$ using TIP4P predict a $T_m$ ranging from 214 to 238 K
325 (differences being attributed to choice of interaction truncation and
326 different ordered and disordered molecular
327 arrangements).\cite{Vlot99,Gao00,Sanz04} If the presence of ice B and
328 Ice-{\it i} were omitted, a $T_m$ value around 210 K would be
329 predicted from this work. However, the $T_m$ from Ice-{\it i} is
330 calculated to be 265 K, indicating that these simulation based
331 structures ought to be included in studies probing phase transitions
332 with this model. Also of interest in these results is that SSD/E does
333 not exhibit a melting point at 1 atm but does sublime at 355 K. This
334 is due to the significant stability of Ice-{\it i} over all other
335 polymorphs for this particular model under these conditions. While
336 troubling, this behavior resulted in the spontaneous crystallization
337 of Ice-{\it i} which led us to investigate this structure. These
338 observations provide a warning that simulations of SSD/E as a
339 ``liquid'' near 300 K are actually metastable and run the risk of
340 spontaneous crystallization. However, when a longer cutoff radius is
341 used, SSD/E prefers the liquid state under standard temperature and
342 pressure.
343
344 \begin{figure}
345 \includegraphics[width=\linewidth]{cutoffChange.eps}
346 \caption{Free energy as a function of cutoff radius for SSD/E, TIP3P,
347 SPC/E, SSD/RF with a reaction field, and the TIP3P and SPC/E models
348 with an added Ewald correction term. Error for the larger cutoff
349 points is equivalent to that observed at 9.0\AA\ (see Table
350 \ref{freeEnergy}). Data for ice I$_c$ with TIP3P using both 12 and
351 13.5 \AA\ cutoffs were omitted because the crystal was prone to
352 distortion and melting at 200 K. Ice-{\it i}$^\prime$ is the form of
353 Ice-{\it i} used in the SPC/E simulations.}
354 \label{incCutoff}
355 \end{figure}
356
357 For the more computationally efficient water models, we have also
358 investigated the effect of potential trunctaion on the computed free
359 energies as a function of the cutoff radius. As seen in
360 Fig. \ref{incCutoff}, the free energies of the ice polymorphs with
361 water models lacking a long-range correction show significant cutoff
362 dependence. In general, there is a narrowing of the free energy
363 differences while moving to greater cutoff radii. As the free
364 energies for the polymorphs converge, the stability advantage that
365 Ice-{\it i} exhibits is reduced. Adjacent to each of these plots are
366 results for systems with applied or estimated long-range corrections.
367 SSD/RF was parametrized for use with a reaction field, and the benefit
368 provided by this computationally inexpensive correction is apparent.
369 The free energies are largely independent of the size of the reaction
370 field cavity in this model, so small cutoff radii mimic bulk
371 calculations quite well under SSD/RF.
372
373 Although TIP3P was paramaterized for use without the Ewald summation,
374 we have estimated the effect of this method for computing long-range
375 electrostatics for both TIP3P and SPC/E. This was accomplished by
376 calculating the potential energy of identical crystals both with and
377 without particle mesh Ewald (PME). Similar behavior to that observed
378 with reaction field is seen for both of these models. The free
379 energies show reduced dependence on cutoff radius and span a narrower
380 range for the various polymorphs. Like the dipolar water models,
381 TIP3P displays a relatively constant preference for the Ice-{\it i}
382 polymorph. Crystal preference is much more difficult to determine for
383 SPC/E. Without a long-range correction, each of the polymorphs
384 studied assumes the role of the preferred polymorph under different
385 cutoff radii. The inclusion of the Ewald correction flattens and
386 narrows the gap in free energies such that the polymorphs are
387 isoenergetic within statistical uncertainty. This suggests that other
388 conditions, such as the density in fixed-volume simulations, can
389 influence the polymorph expressed upon crystallization.
390
391 \section{Conclusions}
392
393 In this report, thermodynamic integration was used to determine the
394 absolute free energies of several ice polymorphs. Of the studied
395 crystal forms, Ice-{\it i} was observed to be the stable crystalline
396 state for {\it all} the water models when using a 9.0 \AA\
397 intermolecular interaction cutoff. Through investigation of possible
398 interaction truncation methods, the free energy was shown to be
399 partially dependent on simulation conditions; however, Ice-{\it i} was
400 still observered to be a stable polymorph of the studied water models.
401
402 So what is the preferred solid polymorph for simulated water? As
403 indicated above, the answer appears to be dependent both on the
404 conditions and the model used. In the case of short cutoffs without a
405 long-range interaction correction, Ice-{\it i} and Ice-{\it
406 i}$^\prime$ have the lowest free energy of the studied polymorphs with
407 all the models. Ideally, crystallization of each model under constant
408 pressure conditions, as was done with SSD/E, would aid in the
409 identification of their respective preferred structures. This work,
410 however, helps illustrate how studies involving one specific model can
411 lead to insight about important behavior of others. In general, the
412 above results support the finding that the Ice-{\it i} polymorph is a
413 stable crystal structure that should be considered when studying the
414 phase behavior of water models.
415
416 We also note that none of the water models used in this study are
417 polarizable or flexible models. It is entirely possible that the
418 polarizability of real water makes Ice-{\it i} substantially less
419 stable than ice $I_h$. However, the calculations presented above seem
420 interesting enough to communicate before the role of polarizability
421 (or flexibility) has been thoroughly investigated.
422
423 Finally, due to the stability of Ice-{\it i} in the investigated
424 simulation conditions, the question arises as to possible experimental
425 observation of this polymorph. The rather extensive past and current
426 experimental investigation of water in the low pressure regime makes
427 us hesitant to ascribe any relevance to this work outside of the
428 simulation community. It is for this reason that we chose a name for
429 this polymorph which involves an imaginary quantity. That said, there
430 are certain experimental conditions that would provide the most ideal
431 situation for possible observation. These include the negative
432 pressure or stretched solid regime, small clusters in vacuum
433 deposition environments, and in clathrate structures involving small
434 non-polar molecules. For experimental comparison purposes, example
435 $g_{OO}(r)$ and $S(\vec{q})$ plots were generated for the two Ice-{\it
436 i} variants (along with example ice $I_h$ and $I_c$ plots) at 77K, and
437 they are shown in figures \ref{fig:gofr} and \ref{fig:sofq}
438 respectively.
439
440 \begin{figure}
441 \centering
442 \includegraphics[width=\linewidth]{iceGofr.eps}
443 \caption{Radial distribution functions of ice $I_h$, $I_c$, and
444 Ice-{\it i} calculated from from simulations of the SSD/RF water model
445 at 77 K. The Ice-{\it i} distribution function was obtained from
446 simulations composed of TIP4P water.}
447 \label{fig:gofr}
448 \end{figure}
449
450 \begin{figure}
451 \centering
452 \includegraphics[width=\linewidth]{sofq.eps}
453 \caption{Predicted structure factors for ice $I_h$, $I_c$, Ice-{\it i},
454 and Ice-{\it i}$^\prime$ at 77 K. The raw structure factors have
455 been convoluted with a gaussian instrument function (0.075 \AA$^{-1}$
456 width) to compensate for the trunction effects in our finite size
457 simulations.}
458 \label{fig:sofq}
459 \end{figure}
460
461 \section{Acknowledgments}
462 Support for this project was provided by the National Science
463 Foundation under grant CHE-0134881. Computation time was provided by
464 the Notre Dame High Performance Computing Cluster and the Notre Dame
465 Bunch-of-Boxes (B.o.B) computer cluster (NSF grant DMR-0079647).
466
467 \newpage
468
469 \bibliographystyle{jcp}
470 \bibliography{iceiPaper}
471
472
473 \end{document}