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Revision 3692 by kstocke1, Mon Nov 15 16:26:11 2010 UTC vs.
Revision 3722 by gezelter, Wed Feb 16 22:13:56 2011 UTC

# Line 2 | Line 2
2   %% http://bibdesk.sourceforge.net/
3  
4  
5 < %% Created for Kelsey Stocker at 2010-11-15 11:25:59 -0500
5 > %% Created for Dan Gezelter at 2011-02-16 17:12:21 -0500
6  
7  
8   %% Saved with string encoding Unicode (UTF-8)
# Line 56 | Line 56
56  
57   @string{rmp = {Rev. Mod. Phys.}}
58  
59 +
60 + @article{Collard1991,
61 +        Author = {Collard, S.M. and McLellan, R.B.},
62 +        Date-Added = {2011-01-25 17:05:11 -0500},
63 +        Date-Modified = {2011-01-25 17:06:48 -0500},
64 +        Journal = {Acta metall. mater.},
65 +        Keywords = {gold; bulk modulus},
66 +        Number = {12},
67 +        Pages = {3143-3151},
68 +        Title = {High-temperature elastic constants of gold single-crystals},
69 +        Volume = {39},
70 +        Year = {1991},
71 +        Bdsk-File-1 = {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}}
72 +
73 + @techreport{QSC2,
74 +        Author = {Kimura, Y. and Qi, Y. and Cagin, T. and Goddard~III, W.A.},
75 +        Date-Added = {2011-01-18 11:52:13 -0500},
76 +        Date-Modified = {2011-02-16 17:12:12 -0500},
77 +        Institution = {Caltech ASCI},
78 +        Lastchecked = {January 19, 2011},
79 +        Number = {003},
80 +        Title = {The Quantum Sutton-Chen Many Body Potential for Properties of fcc Metals},
81 +        Url = {http://csdrm.caltech.edu/publications/cit-asci-tr/cit-asci-tr003.pdf},
82 +        Year = {1998},
83 +        Bdsk-Url-1 = {http://csdrm.caltech.edu/publications/cit-asci-tr/cit-asci-tr003.pdf}}
84 +
85 + @misc{open_md,
86 +        Author = {Gezelter, J. D. and Kuang, S. and Marr, J. and Stocker, K. M. and Li, C. and Vardeman, C. F. and Lin, T. and Fennell, C. J. and Sun, X. and Daily, K. and Zheng, Y. and Meineke, M. A.},
87 +        Date-Added = {2011-01-18 11:24:22 -0500},
88 +        Date-Modified = {2011-01-20 12:11:55 -0500},
89 +        Howpublished = {http://openmd.net},
90 +        Lastchecked = {January 18, 2011},
91 +        Title = {OpenMD, an open source engine for molecular dynamics},
92 +        Bdsk-Url-1 = {http://openmd.net}}
93 +
94 + @misc{Q_Hull,
95 +        Author = {Barber, C. Bradford and Huhdanpaa, Hannu},
96 +        Date-Added = {2011-01-18 11:19:34 -0500},
97 +        Date-Modified = {2011-02-16 16:57:25 -0500},
98 +        Howpublished = {\url{http://www.qhull.org}},
99 +        Keywords = {1993 Software Library Is Available From the National Science and Technology Re- search Center for Computation and Visualization of Geometric Structures (The Geometry Center), University of Minnesota},
100 +        Lastchecked = {January 18, 2011},
101 +        Title = {Qhull},
102 +        Url = {http://www.qhull.org},
103 +        Urldate = {January 18, 2011},
104 +        Bdsk-Url-1 = {http://www.qhull.org}}
105  
106   @unpublished{QSC,
107          Author = {Y. Kimura and T. Cagin and W. A. {Goddard III}},
# Line 77 | Line 123
123          Isi = {000259719400006},
124          Isi-Recid = {173553934},
125          Isi-Ref-Recids = {45853871 70732554 152291148 104489423 104489429 65322851 87480881 90163797 93668415 39889551 46774919 72549485 282445 41538860 50985260 52031423 118060314 121628598 148959020 62737851 93573488 134643892 36862872 83010484 105744290 91472272 110749892 118461739 120957948 134599612 114633021 70197537 107985288 146240895 127089201 143385646 150932516 142444198 121603296 109842709 125496094 107255659 134599616 102272218 75630818 101084982 44754957 149298475 117544086 124879696 62609631 67033562 149633382 109842663 63091485 111340113 105035661 73139919 173553935 107383980 104342509 125966406 104156158 89313539 37068368 57373279 29138640 53172669 136485000 126777112 134886755},
126 <        Journal = {Journal of Molecular Structure-Theochem},
126 >        Journal = {J. Mol. Struct. - THEOCHEM},
127          Keywords = {molecular dynamics; hybrid solvation; polyalanine; non-periodic boundary conclicion},
128          Month = sep,
129          Number = {1-3},
# Line 122 | Line 168
168          Date-Modified = {2010-11-09 15:01:26 -0500},
169          Doi = {DOI: 10.1016/S0022-5193(05)80422-9},
170          Issn = {0022-5193},
171 <        Journal = {Journal of Theoretical Biology},
171 >        Journal = {J. Theor. Biol.},
172          Number = {2},
173          Pages = {195 - 203},
174          Title = {Total cell protein concentration as an evolutionary constraint on the metabolic control distribution in cells},
# Line 138 | Line 184
184          Date-Modified = {2010-11-09 14:38:13 -0500},
185          Doi = {DOI: 10.1529/biophysj.104.058859},
186          Issn = {0006-3495},
187 <        Journal = {Biophysical Journal},
187 >        Journal = {Biophys. J.},
188          Number = {5},
189          Pages = {3300 - 3309},
190          Title = {A Consistent Experimental and Modeling Approach to Light-Scattering Studies of Protein-Protein Interactions in Solution},
# Line 154 | Line 200
200          Author = {Dey, TK and Giesen, J and Goswami, S and Zhao, WL},
201          Date = {APR 2003},
202          Date-Added = {2010-11-04 11:11:29 -0400},
203 <        Date-Modified = {2010-11-04 11:11:29 -0400},
203 >        Date-Modified = {2011-02-16 17:00:39 -0500},
204          Doi = {DOI 10.1007/s00454-002-2838-9},
205 <        Journal = {Discrete \& Computational Geometry},
205 >        Journal = {Discrete Comput. Geom.},
206          Pages = {419-434},
207          Publisher = {SPRINGER-VERLAG},
208          Timescited = {3},
# Line 172 | Line 218
218          Date = {JAN 1994},
219          Date-Added = {2010-11-04 11:11:14 -0400},
220          Date-Modified = {2010-11-04 11:11:14 -0400},
221 <        Journal = {ACM Transactions On Graphics},
221 >        Journal = {ACM Trans. Graphics},
222          Keywords = {COMPUTATIONAL GRAPHICS; DELAUNAY TRIANGULATIONS; GEOMETRIC ALGORITHMS; POINT SETS; POLYTOPES; ROBUST IMPLEMENTATION; SCIENTIFIC COMPUTING; SCIENTIFIC VISUALIZATION; SIMPLICIAL COMPLEXES; SIMULATED PERTURBATION; 3-DIMENSIONAL SPACE},
223          Pages = {43-72},
224          Publisher = {ASSOC COMPUTING MACHINERY},
# Line 187 | Line 233
233          Author = {Edelsbrunner, H},
234          Date = {APR-JUN 1995},
235          Date-Added = {2010-11-04 11:11:14 -0400},
236 <        Date-Modified = {2010-11-04 11:11:14 -0400},
237 <        Journal = {Discrete \& Computational Geometry},
236 >        Date-Modified = {2011-02-16 17:00:28 -0500},
237 >        Journal = {Discrete Comput. Geom.},
238          Pages = {415-440},
239          Publisher = {SPRINGER VERLAG},
240          Timescited = {65},
# Line 221 | Line 267
267          Date-Modified = {2010-10-27 12:44:24 -0400},
268          Issn = {0885-7458},
269          Issue = {3},
270 <        Journal = {International Journal of Parallel Programming},
270 >        Journal = {Int. J. Parallel Programming},
271          Keyword = {Computer Science},
226 –        Note = {10.1007/BF00977785},
272          Pages = {219-242},
273          Publisher = {Springer Netherlands},
274          Title = {Two algorithms for constructing a Delaunay triangulation},
# Line 252 | Line 297
297          Journal = {J. Chem. Phys.},
298          Month = jun,
299          Number = {23},
300 +        Pages = {234107},
301          Publisher = {AMER INST PHYSICS},
302          Times-Cited = {2},
303          Title = {Langevin dynamics for rigid bodies of arbitrary shape},
# Line 351 | Line 397
397          Date-Added = {2010-10-19 10:14:13 -0400},
398          Date-Modified = {2010-10-19 10:14:13 -0400},
399          Doi = {DOI 10.1016/j.commatsci.2005.12.028},
400 <        Journal = {Computational Materials Science},
400 >        Journal = {Comp. Mat. Sci.},
401          Keywords = {high pressures; finite systems; volume; molecular dynamics},
402          Pages = {526-536},
403          Publisher = {ELSEVIER SCIENCE BV},
# Line 935 | Line 981 | can be very different from that of small hydrophobic m
981          Author = {Jiyao Wang and Yuqing Deng and Beno{\^\i}t Roux},
982          Date-Added = {2010-09-08 16:48:01 -0400},
983          Date-Modified = {2010-09-08 16:48:01 -0400},
984 <        Journal = {Biophysical Journal},
984 >        Journal = {Biophys. J.},
985          Keywords = {restraining potential},
986          Month = {October},
987          Pages = {2798-2814},
# Line 1302 | Line 1348 | can be very different from that of small hydrophobic m
1348          Author = {{Garc\'{i}a de la Torre}, Jose},
1349          Date-Added = {2008-04-29 15:11:32 -0400},
1350          Date-Modified = {2008-04-29 15:11:32 -0400},
1351 <        Journal = {Biophysical Chemistry},
1351 >        Journal = {Biophys. Chem.},
1352          Keywords = {Rigid macromolecules; Hydrodynamic properties; Bead-shell model; Three-dimensional structure},
1353          Number = {3},
1354          Pages = {265--274},

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