matt_papers/MWTCC03/poster.tex

%% this is my poster for the Midwest Theoretical Conference


\documentclass[10pt]{scrartcl}
%%
%
% This is a poster template with latex macros and using
% the University of Florida Logo.  For further information
% on making postscript, resizeing, and printing the poster file
% please see web site 
% http://www.phys.ufl.edu/~pjh/posters/poster_howto_UF.html
% 
% N.B. This format is cribbed from one obtained from the University
% of Karlsruhe, so some macro names and parameters are in German
% Here is a short glosary:
% Breite: width
% Hoehe: height
% Spalte: column
% Kasten: box
%
% All style files necessary are part of standard TeTeX distribution
% On the UF unix cluster you should not need to import these files
% specially, as they will be automatically located.  If you
% run on a local PC however, you will need to locate these files.
% At UF try /usr/local/TeTeX...
% 
% P. Hirschfeld 2/11/00
%
% The recommended procedure is to first generate a ``Special Format" size poster
% file, which is relatively easy to manipulate and view.  It can be
% resized later to A0 (900 x 1100 mm) full poster size, or A4 or Letter size
% as desired (see web site).  Note the large format printers currently
% in use at UF's OIR have max width of about 90cm or 3 ft., but the paper
% comes in rolls so the length is variable.  See below the specifications
% for width and height of various formats.  Default in the template is
% ``Special Format",  with 4 columns.
%%
%% 
%% Choose your poster size:
%% For printing you will later RESIZE your poster by a factor
%%        2*sqrt(2) = 2.828    (for A0)
%%        2         = 2.00     (for A1) 
%%  
%% 
%%\def\breite{452mm}     % Gives a 4.1 foot width
\def\breite{390mm}       % Special Format. 
\def\hoehe{319.2mm}      % Scaled by 2.82 this gives 110cm x 90cm 
\def\anzspalten{4}
%%
%%\def\breite{420mm}     % A3 LANDSCAPE
%%\def\hoehe{297mm}
%%\def\anzspalten{4}
%%
%% \def\breite{297mm}     % A3 PORTRAIT
%% \def\hoehe{420mm}
%% \def\anzspalten{3}
%%
%% \def\breite{210mm}     % A4 PORTRAIT
%% \def\hoehe{297mm}
%% \def\anzspalten{2}
%%
%%
%% Procedure:
%%   Generate poster.dvi with latex
%%   Check with Ghostview
%%   Make a .ps-file with ``dvips -o poster.ps poster''
%%   Scale it with poster_resize poster.ps S
%%   where S is scale factor
%%     for Special Format->A0 S= 2.828 (= 2^(3/2)))
%%     for Special Format->A1 S= 2 (= 2^(2/2)))
%% 
%% Sizes (European:)
%%   A3: 29.73 X 42.04 cm
%%   A1: 59.5 X 84.1 cm
%%   A0: 84.1 X 118.9 cm
%%   N.B. The recommended procedure is ``Special Format x 2.82"
%%   which gives 90cm x 110cm (not quite A0 dimensions).
%%
%% --------------------------------------------------------------------------
%%
%% Load the necessary packages
%% 
%%\usepackage{berkeley}
\usepackage{palatino}
\usepackage[latin1]{inputenc}
\usepackage{epsf}
\usepackage{graphicx,psfrag,color,pstcol,pst-grad}
\usepackage{amsmath,amssymb}
\usepackage{latexsym}
\usepackage{calc}
\usepackage{multicol}

%% My Packages
%%\usepackage{wrapfig}

%%
%% Define the required numbers, lengths and boxes 
%%
\newsavebox{\dummybox}
\newsavebox{\spalten}
%\input psfig.sty

%%
%%
\newlength{\bgwidth}\newlength{\bgheight}
\setlength\bgheight{\hoehe} \addtolength\bgheight{-1mm}
\setlength\bgwidth{\breite} \addtolength\bgwidth{-1mm}

\newlength{\kastenwidth}

%% Set paper format
\setlength\paperheight{\hoehe}                                             
\setlength\paperwidth{\breite}
\special{papersize=\breite,\hoehe}

\topmargin -1in
\marginparsep0mm
\marginparwidth0mm
\headheight0mm
\headsep0mm


%% Minimal Margins to Make Correct Bounding Box
\setlength{\oddsidemargin}{-2.44cm}
\addtolength{\topmargin}{-3mm}
\textwidth\paperwidth
\textheight\paperheight

%%
%%
\parindent0cm
\parskip1.5ex plus0.5ex minus 0.5ex
\pagestyle{empty}


\definecolor{ndgold}{rgb}{0.87,0.82,0.59}
\definecolor{ndgold2}{rgb}{0.96,0.91,0.63}
\definecolor{ndblue}{rgb}{0,0.1875, 0.6992}
\definecolor{recoilcolor}{rgb}{1,0,0}
\definecolor{occolor}{rgb}{0,1,0}
\definecolor{pink}{rgb}{0,1,1}


\def\UberStil{\normalfont\sffamily\bfseries\large}
\def\UnterStil{\normalfont\sffamily\small}
\def\LabelStil{\normalfont\sffamily\tiny}
\def\LegStil{\normalfont\sffamily\tiny}

%%
%% Define some commands
%%
\definecolor{JG}{rgb}{0.1,0.9,0.3}

\newenvironment{kasten}{%
  \begin{lrbox}{\dummybox}%
    \begin{minipage}{0.96\linewidth}}%
    {\end{minipage}%
  \end{lrbox}%
  \raisebox{-\depth}{\psshadowbox[framearc=0.05,framesep=1em]{\usebox{\dummybox}}}\\[0.5em]}
\newenvironment{spalte}{%
  \setlength\kastenwidth{1.2\textwidth}
  \divide\kastenwidth by \anzspalten
  \begin{minipage}[t]{\kastenwidth}}{\end{minipage}\hfill}

%%\renewcommand{\emph}[1]{{\color{red}\textbf{#1}}}


\def\op#1{\hat{#1}}
\begin{document}
\bibliographystyle{plain}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%               Background                     %%%             
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

%%{\newrgbcolor{gradbegin}{0.87 0.82 0.59}%
{\newrgbcolor{gradbegin}{0.0 0.1875 0.6992}%
  \newrgbcolor{gradend}{1 1 1}%{1 1 0.5}%
  \psframe[fillstyle=gradient,gradend=gradend,%
  gradbegin=gradbegin,gradmidpoint=0.1](\bgwidth,-\bgheight)}
\vfill
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%                     Header                   %%%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\hfill
\psshadowbox[fillstyle=solid,fillcolor=ndgold2]{\makebox[0.95\textwidth]{%
    \hfill
    \parbox[c]{2cm}{\includegraphics[width=8cm]{ndLogoScience1a.eps}}
    \hfill
    \parbox[c]{0.8\linewidth}{%
      \begin{center}
        \color{ndblue}
        \textbf{\Huge {A Mesoscale Model for Phospholipid Simulations}}\\[0.5em]
        \textsc{\LARGE \underline{Matthew~A.~Meineke}, and J.~Daniel~Gezelter}\\[0.3em]
        {\large Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA\\
{\tt\ mmeineke@nd.edu}
}
      \end{center}}
\hfill}}\hfill\mbox{}\\[1.cm]
%\vspace*{1.3cm}
\begin{lrbox}{\spalten}
  \parbox[t][\textheight]{1.3\textwidth}{%
    \vspace*{0.2cm}
    \hfill
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%                 first column                 %%%             
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%


    \begin{spalte}
     \begin{kasten}
% 
%
%   This begins the first "kasten" or box
%
%
     \begin{center}
{\large{\color{red}    \underline{ABSTRACT}  } }
     \end{center}

{\color{ndblue}

A mesoscale model for phospholipids has been developed for molecular
dynamics simulations of lipid bilayers. The model makes several
simplifications to both the water and the phospholipids to reduce the
computational cost of each force evaluation. The water was represented
by the soft sticky dipole model of Ichiye \emph{et
al}.\cite{liu96:new_model,liu96:monte_carlo,chandra99:ssd_md} The
simplifications to the phospholipids included the reduction of atoms
in the tail groups to beads representing $\mbox{CH}_{2}$ and
$\mbox{CH}_{3}$ unified atoms, and the replacement of the head groups
with a single point mass containing a centrally located dipole. The
model was then used to simulate micelle and bilayer formation from a
configuration of randomly placed phospholipids which was simulated for
times in excess of 30 nanoseconds.

 }
      \end{kasten}


     \end{spalte}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%               second column                  %%%             
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
    \begin{spalte}
     
     \begin{kasten}
     \section{{\color{ndblue}Ima second column holder}}

        hello

     \end{kasten}
        

    \end{spalte}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%               third column                   %%%             
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
    \begin{spalte}

     \begin{kasten}
     
     \section{{\color{ndblue}Ima third column holder}}
     
        hello

     \end{kasten}


    \end{spalte}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%               fourth column                  %%%             
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
    \begin{spalte}


     \begin{kasten}
        \begin{center}  
        {\large{\color{red} \underline{Acknowledgments}}}
     \end{center}

The authors would like to acknowledge Charles Vardeman, Christopher
Fennell, and Teng lin for their contributions to the simulation
engine. MAM would also like to extend a special thank you to Charles
Vardeman for his help with the TeX formatting of this
poster. Computaion time was provided on the Bunch-of-Boxes (B.o.B.)
cluster under NSF grant DMR 00 79647. The authors acknowledge support
under NSF grant CHE-0134881.

     \end{kasten}

\vspace{0.5cm}
      \begin{kasten}
           {\small
                \bibliography{poster}
           }
   \end{kasten}
    \end{spalte}
    }
    \end{lrbox}
\resizebox*{0.98\textwidth}{!}{%
  \usebox{\spalten}}\hfill\mbox{}\vfill
\end{document}
Revision:	549
Committed:	Thu Jun 5 19:37:58 2003 UTC (21 years, 3 months ago) by mmeineke
Content type:	application/x-tex
File size:	8970 byte(s)
Log Message:	nothing major just some little changes here and there.
#	User	Rev	Content
1	mmeineke	546	%% this is my poster for the Midwest Theoretical Conference
2
3
4			\documentclass[10pt]{scrartcl}
5			%%
6			%
7			% This is a poster template with latex macros and using
8			% the University of Florida Logo. For further information
9			% on making postscript, resizeing, and printing the poster file
10			% please see web site
11			% http://www.phys.ufl.edu/~pjh/posters/poster_howto_UF.html
12			%
13			% N.B. This format is cribbed from one obtained from the University
14			% of Karlsruhe, so some macro names and parameters are in German
15			% Here is a short glosary:
16			% Breite: width
17			% Hoehe: height
18			% Spalte: column
19			% Kasten: box
20			%
21			% All style files necessary are part of standard TeTeX distribution
22			% On the UF unix cluster you should not need to import these files
23			% specially, as they will be automatically located. If you
24			% run on a local PC however, you will need to locate these files.
25			% At UF try /usr/local/TeTeX...
26			%
27			% P. Hirschfeld 2/11/00
28			%
29			% The recommended procedure is to first generate a ``Special Format" size poster
30			% file, which is relatively easy to manipulate and view. It can be
31			% resized later to A0 (900 x 1100 mm) full poster size, or A4 or Letter size
32			% as desired (see web site). Note the large format printers currently
33			% in use at UF's OIR have max width of about 90cm or 3 ft., but the paper
34			% comes in rolls so the length is variable. See below the specifications
35			% for width and height of various formats. Default in the template is
36			% ``Special Format", with 4 columns.
37			%%
38			%%
39			%% Choose your poster size:
40			%% For printing you will later RESIZE your poster by a factor
41			%% 2*sqrt(2) = 2.828 (for A0)
42			%% 2 = 2.00 (for A1)
43			%%
44			%%
45			%%\def\breite{452mm} % Gives a 4.1 foot width
46			\def\breite{390mm} % Special Format.
47			\def\hoehe{319.2mm} % Scaled by 2.82 this gives 110cm x 90cm
48			\def\anzspalten{4}
49			%%
50			%%\def\breite{420mm} % A3 LANDSCAPE
51			%%\def\hoehe{297mm}
52			%%\def\anzspalten{4}
53			%%
54			%% \def\breite{297mm} % A3 PORTRAIT
55			%% \def\hoehe{420mm}
56			%% \def\anzspalten{3}
57			%%
58			%% \def\breite{210mm} % A4 PORTRAIT
59			%% \def\hoehe{297mm}
60			%% \def\anzspalten{2}
61			%%
62			%%
63			%% Procedure:
64			%% Generate poster.dvi with latex
65			%% Check with Ghostview
66			%% Make a .ps-file with ``dvips -o poster.ps poster''
67			%% Scale it with poster_resize poster.ps S
68			%% where S is scale factor
69			%% for Special Format->A0 S= 2.828 (= 2^(3/2)))
70			%% for Special Format->A1 S= 2 (= 2^(2/2)))
71			%%
72			%% Sizes (European:)
73			%% A3: 29.73 X 42.04 cm
74			%% A1: 59.5 X 84.1 cm
75			%% A0: 84.1 X 118.9 cm
76			%% N.B. The recommended procedure is ``Special Format x 2.82"
77			%% which gives 90cm x 110cm (not quite A0 dimensions).
78			%%
79			%% --------------------------------------------------------------------------
80			%%
81			%% Load the necessary packages
82			%%
83	mmeineke	549	%%\usepackage{berkeley}
84			\usepackage{palatino}
85	mmeineke	546	\usepackage[latin1]{inputenc}
86			\usepackage{epsf}
87			\usepackage{graphicx,psfrag,color,pstcol,pst-grad}
88			\usepackage{amsmath,amssymb}
89			\usepackage{latexsym}
90			\usepackage{calc}
91			\usepackage{multicol}
92
93			%% My Packages
94			%%\usepackage{wrapfig}
95
96			%%
97			%% Define the required numbers, lengths and boxes
98			%%
99			\newsavebox{\dummybox}
100			\newsavebox{\spalten}
101			%\input psfig.sty
102
103			%%
104			%%
105			\newlength{\bgwidth}\newlength{\bgheight}
106			\setlength\bgheight{\hoehe} \addtolength\bgheight{-1mm}
107			\setlength\bgwidth{\breite} \addtolength\bgwidth{-1mm}
108
109			\newlength{\kastenwidth}
110
111			%% Set paper format
112			\setlength\paperheight{\hoehe}
113			\setlength\paperwidth{\breite}
114			\special{papersize=\breite,\hoehe}
115
116			\topmargin -1in
117			\marginparsep0mm
118			\marginparwidth0mm
119			\headheight0mm
120			\headsep0mm
121
122
123			%% Minimal Margins to Make Correct Bounding Box
124			\setlength{\oddsidemargin}{-2.44cm}
125			\addtolength{\topmargin}{-3mm}
126			\textwidth\paperwidth
127			\textheight\paperheight
128
129			%%
130			%%
131			\parindent0cm
132			\parskip1.5ex plus0.5ex minus 0.5ex
133			\pagestyle{empty}
134
135
136
137			\definecolor{ndgold}{rgb}{0.87,0.82,0.59}
138			\definecolor{ndgold2}{rgb}{0.96,0.91,0.63}
139	mmeineke	547	\definecolor{ndblue}{rgb}{0,0.1875, 0.6992}
140	mmeineke	546	\definecolor{recoilcolor}{rgb}{1,0,0}
141			\definecolor{occolor}{rgb}{0,1,0}
142			\definecolor{pink}{rgb}{0,1,1}
143
144
145
146
147
148			\def\UberStil{\normalfont\sffamily\bfseries\large}
149			\def\UnterStil{\normalfont\sffamily\small}
150			\def\LabelStil{\normalfont\sffamily\tiny}
151			\def\LegStil{\normalfont\sffamily\tiny}
152
153			%%
154			%% Define some commands
155			%%
156			\definecolor{JG}{rgb}{0.1,0.9,0.3}
157
158			\newenvironment{kasten}{%
159			\begin{lrbox}{\dummybox}%
160			\begin{minipage}{0.96\linewidth}}%
161			{\end{minipage}%
162			\end{lrbox}%
163			\raisebox{-\depth}{\psshadowbox[framearc=0.05,framesep=1em]{\usebox{\dummybox}}}\\[0.5em]}
164			\newenvironment{spalte}{%
165			\setlength\kastenwidth{1.2\textwidth}
166			\divide\kastenwidth by \anzspalten
167			\begin{minipage}[t]{\kastenwidth}}{\end{minipage}\hfill}
168
169			%%\renewcommand{\emph}[1]{{\color{red}\textbf{#1}}}
170
171
172			\def\op#1{\hat{#1}}
173			\begin{document}
174			\bibliographystyle{plain}
175			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
176			%%% Background %%%
177			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
178	mmeineke	547
179			%%{\newrgbcolor{gradbegin}{0.87 0.82 0.59}%
180			{\newrgbcolor{gradbegin}{0.0 0.1875 0.6992}%
181	mmeineke	546	\newrgbcolor{gradend}{1 1 1}%{1 1 0.5}%
182			\psframe[fillstyle=gradient,gradend=gradend,%
183			gradbegin=gradbegin,gradmidpoint=0.1](\bgwidth,-\bgheight)}
184			\vfill
185			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
186			%%% Header %%%
187			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
188			\hfill
189			\psshadowbox[fillstyle=solid,fillcolor=ndgold2]{\makebox[0.95\textwidth]{%
190			\hfill
191	mmeineke	547	\parbox[c]{2cm}{\includegraphics[width=8cm]{ndLogoScience1a.eps}}
192	mmeineke	546	\hfill
193			\parbox[c]{0.8\linewidth}{%
194			\begin{center}
195	mmeineke	547	\color{ndblue}
196	mmeineke	546	\textbf{\Huge {A Mesoscale Model for Phospholipid Simulations}}\\[0.5em]
197			\textsc{\LARGE \underline{Matthew~A.~Meineke}, and J.~Daniel~Gezelter}\\[0.3em]
198			{\large Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA\\
199			{\tt\ mmeineke@nd.edu}
200			}
201			\end{center}}
202			\hfill}}\hfill\mbox{}\\[1.cm]
203			%\vspace*{1.3cm}
204			\begin{lrbox}{\spalten}
205			\parbox[t][\textheight]{1.3\textwidth}{%
206			\vspace*{0.2cm}
207			\hfill
208			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
209			%%% first column %%%
210			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
211
212
213			\begin{spalte}
214			\begin{kasten}
215			%
216			%
217			% This begins the first "kasten" or box
218			%
219			%
220			\begin{center}
221			{\large{\color{red} \underline{ABSTRACT} } }
222			\end{center}
223
224			{\color{ndblue}
225
226			A mesoscale model for phospholipids has been developed for molecular
227			dynamics simulations of lipid bilayers. The model makes several
228			simplifications to both the water and the phospholipids to reduce the
229			computational cost of each force evaluation. The water was represented
230			by the soft sticky dipole model of Ichiye \emph{et
231			al}.\cite{liu96:new_model,liu96:monte_carlo,chandra99:ssd_md} The
232			simplifications to the phospholipids included the reduction of atoms
233			in the tail groups to beads representing $\mbox{CH}_{2}$ and
234			$\mbox{CH}_{3}$ unified atoms, and the replacement of the head groups
235			with a single point mass containing a centrally located dipole. The
236			model was then used to simulate micelle and bilayer formation from a
237			configuration of randomly placed phospholipids which was simulated for
238			times in excess of 30 nanoseconds.
239
240			}
241			\end{kasten}
242
243
244
245			\end{spalte}
246			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
247			%%% second column %%%
248			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
249			\begin{spalte}
250
251			\begin{kasten}
252	mmeineke	549	\section{{\color{ndblue}Ima second column holder}}
253	mmeineke	546
254			hello
255
256			\end{kasten}
257
258
259
260
261			\end{spalte}
262			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
263			%%% third column %%%
264			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
265			\begin{spalte}
266
267			\begin{kasten}
268	mmeineke	549
269			\section{{\color{ndblue}Ima third column holder}}
270
271	mmeineke	546	hello
272
273			\end{kasten}
274
275
276			\end{spalte}
277			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
278			%%% fourth column %%%
279			%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
280			\begin{spalte}
281
282
283
284
285
286			\begin{kasten}
287			\begin{center}
288			{\large{\color{red} \underline{Acknowledgments}}}
289			\end{center}
290
291			The authors would like to acknowledge Charles Vardeman, Christopher
292			Fennell, and Teng lin for their contributions to the simulation
293			engine. MAM would also like to extend a special thank you to Charles
294			Vardeman for his help with the TeX formatting of this
295			poster. Computaion time was provided on the Bunch-of-Boxes (B.o.B.)
296			cluster under NSF grant DMR 00 79647. The authors acknowledge support
297			under NSF grant CHE-0134881.
298
299			\end{kasten}
300
301			\vspace{0.5cm}
302			\begin{kasten}
303			{\small
304			\bibliography{poster}
305			}
306			\end{kasten}
307			\end{spalte}
308			}
309			\end{lrbox}
310			\resizebox*{0.98\textwidth}{!}{%
311			\usebox{\spalten}}\hfill\mbox{}\vfill
312			\end{document}