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% temporary preamble |
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\documentclass{seminar} |
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\usepackage{color} |
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\usepackage{amsmath} |
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\usepackage{amssymb} |
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\usepackage{epsf} |
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% ---------------------- |
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\begin{slide}{Soft Sticky Dipole Model} |
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The soft sticky model consists of a |
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The Soft-Sticky model for water is a reduced model. |
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\begin{itemize} |
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\item |
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The model is represented by a single point mass at the water's center |
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of mass. |
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\item |
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The point mass contains a fixed dipole of 2.35 D pointing from the |
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oxegens toward the hydrogens. |
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\end{itemize} |
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\color{red} |
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!!!!!!!!!!!!!SSD image goes here.!!!!!!!!!!!!!!!! |
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\color{black} |
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It's potential is as follows: |
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\begin{equation} |
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V_{s\!s\!d} = V_{l\!j}(r_{i\!j}) + V_{d\!p}(r_{i\!j},\Omega_{i},\Omega_{j}) |
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+ V_{s\!p}(r_{i\!j},\Omega_{i},\Omega_{j}) |
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\end{equation} |
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\end{slide} |
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% Slide 9 |
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\begin{slide}{Hydrogen Bonding in SSD} |
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It is important to note that SSD has a potential specifically to |
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recreate the hydrogen bonfding network of water. |
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\color{red} |
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ICE SSD |
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ICE point Dipole |
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\color{black} |
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The importance of the hydrogen bond network is it's signifigant |
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contribution to the hydrophobic driving force of bilayer formation. |
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\end{slide} |
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% Slide 10 |
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\begin{slide}{The Lipid Model} |
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\color{red} |
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Look at me, I'm a lipid.!!!!!!!! |
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YAY!!!!!!!!!!!!!!!!!!!!! |
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\color{black} |
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\end{slide} |
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% Slide 11 |
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\begin{slide}{Initial Runs: 25 Lipids in water} |
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\color{red} |
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5x5 parameters |
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\color{black} |
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\end{slide} |
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% Slide 12 |
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\begin{slide}{5x5: Initial and Final} |
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\color{red} |
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picture of initial |
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picture of final |
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\color{black} |
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\end{slide} |
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% Slide 13 |
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\begin{slide}{5x5: $g(r)$} |
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\color{red} |
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GofR's baby |
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\color{black} |
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\end{slide} |
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% Slide 14 |
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\begin{slide}{5x5: $\cos$ correlations} |
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\color{red} |
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Cosine correlation functions |
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\color{black} |
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\end{slide} |
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% Slide 15 |
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\begin{slide}{Initial Runs: 50 Lipids radomly arrangend in water} |
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\color{red} |
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R-50 parameters |
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\color{black} |
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\end{slide} |
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% Slide 16 |
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\begin{slide}{R-50: Initial and Final} |
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\color{red} |
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picture of initial |
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picture of final |
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\color{black} |
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\end{slide} |
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% Slide 17 |
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\begin{slide}{R-50: $g(r)$} |
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\color{red} |
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GofR's baby |
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\color{black} |
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\end{slide} |
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% Slide 18 |
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\begin{slide}{R-50: $\cos$ correlations} |
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\color{red} |
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Cosine correlation functions |
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\color{black} |
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\end{slide} |
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% Slide 19 |
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\begin{slide}{Future Directions} |
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\color{red} |
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THe future is wide open |
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\color{black} |
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\end{slide} |
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% Slide 20 |
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\begin{slide}{Acknowledgements} |
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\color{red} |
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Mad Props to all my homies |
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I'll mourn ya till I join Ya. |
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\color{black} |
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\end{slide} |
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%%%%%%%%%%%%%%%%%%%%%%%%%% END %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
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\end{document} |