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1 xsun 3147
2 gezelter 3199 %% Created for Dan Gezelter at 2007-07-26 11:42:09 -0400
3    
4    
5     %% Saved with string encoding Western (ASCII)
6    
7    
8     @string{acp = {Adv. Chem. Phys.}}
9    
10     @string{bj = {Biophys. J.}}
11    
12     @string{cp = {Chem. Phys.}}
13    
14     @string{cpc = {Comp. Phys. Comm.}}
15    
16     @string{cpl = {Chem. Phys. Lett.}}
17    
18     @string{jacs = {J. Am. Chem. Soc.}}
19    
20     @string{jcc = {J. Comp. Chem.}}
21    
22     @string{jcp = {J. Chem. Phys.}}
23    
24     @string{jml = {J. Mol. Liq.}}
25    
26     @string{jpc = {J. Phys. Chem.}}
27    
28     @string{jpca = {J. Phys. Chem. A}}
29    
30     @string{jpcb = {J. Phys. Chem. B}}
31    
32     @string{mp = {Mol. Phys.}}
33    
34     @string{pnas = {Proc. Natl. Acad. Sci. USA}}
35    
36     @string{pra = {Phys. Rev. A}}
37    
38     @string{prb = {Phys. Rev. B}}
39    
40     @string{pre = {Phys. Rev. E}}
41    
42     @string{prl = {Phys. Rev. Lett.}}
43    
44     @string{rmp = {Rev. Mod. Phys.}}
45    
46    
47 xsun 3147 @article{Ayton95,
48 gezelter 3199 Author = {G. Ayton and M.~J.~P. Gingras and G.~N. Patey},
49     Journal = prl,
50     Number = 12,
51     Pages = {2360-2363},
52     Title = {Orientational Ordering in Spatially Disordered Dipolar System},
53     Volume = 75,
54     Year = 1995}
55 xsun 3147
56     @article{Ayton97,
57 gezelter 3199 Author = {G. Ayton and M. J. P. Gingras and G. N. Patey},
58     Journal = pre,
59     Number = 1,
60     Pages = {562-570},
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64 xsun 3147
65     @article{Katsaras00,
66 gezelter 3199 Author = {J. Katsaras and S. Tristram-Nagle and Y. Liu and R. L. Headrick and E.Fontes and P. C. Mason and J. F. Nagle},
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68     Number = 5,
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73 xsun 3147
74     @article{Lubensky93,
75 gezelter 3199 Author = {T. C. Lubensky and F. C. MacKintosh},
76     Journal = prl,
77     Number = 10,
78     Pages = {1565-1568},
79     Title = {Theory of ``Ripple'' Phases of Lipid Bilayers},
80     Volume = 71,
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82 xsun 3147
83     @article{Sun96,
84 gezelter 3199 Author = {W. J. Sun and S. Tristram-Nagle and R. M. Suter and J. F. Nagle},
85     Journal = pnas,
86     Pages = {7008-7012},
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88     Volume = 93,
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90 xsun 3147
91     @article{Kaasgaard03,
92 gezelter 3199 Author = {Thomas Kaasgaard and Chad Leidy and John H. Crowe and Ole G. Mouritsen and Kent J\o rgensen},
93     Journal = bj,
94     Number = 1,
95     Pages = {350-360},
96     Title = {Temperature-Controlled Structure and Kinetics of Ripple Phases in One- and Two-Component Supported Lipid Bilayers},
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98     Year = 2003}
99 xsun 3147
100     @article{Tao91,
101 gezelter 3199 Author = {R. Tao and J. M. Sun},
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108 xsun 3147
109     @article{Weis92,
110 gezelter 3199 Author = {J. J. Weis and D. Levesque and G. J. Zarragoicoechea},
111     Journal = prl,
112     Number = 6,
113     Pages = {913-916},
114     Title = {Orientational Order in Simple Dipolar Liquid-Crystal Models},
115     Volume = 69,
116     Year = 1992}
117 xsun 3147
118     @article{Wei92,
119 gezelter 3199 Author = {Dongqing Wei and G. N. Patey},
120     Journal = prl,
121     Number = 13,
122     Pages = {2043-2045},
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124     Volume = 68,
125     Year = 1992}
126 xsun 3147
127     @article{Pandit03,
128 gezelter 3199 Author = {Sagar A. Pandit and David Bostick and Max L. Berkowitz},
129     Journal = jcp,
130     Number = 4,
131     Pages = {2199-2205},
132     Title = {An algorithm to describe molecular scale rugged surfaces and its application to the study of a water/lipid bilayer interface},
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135 xsun 3147
136     @article{Luttinger46,
137 gezelter 3199 Author = {J. M. Luttinger and L. Tisza},
138     Journal = {Physical Review},
139     Number = 11,
140     Pages = {954-964},
141     Title = {Theory of Dipole Interaction in Crystals},
142     Volume = 70,
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144 xsun 3147
145     @article{Heimburg00,
146 gezelter 3199 Author = {Thomas Heimburg},
147     Journal = bj,
148     Pages = {1154-1165},
149     Title = {A Model for the Lipid Pretransition: Coupling of Ripple Formation with the Chain-Melting Transition},
150     Volume = 78,
151     Year = 2000}
152 xsun 3147
153     @article{Goldstein88,
154 gezelter 3199 Author = {Raymond E. Goldstein and Stanislas Leibler},
155     Journal = prl,
156     Number = 19,
157     Pages = {2213-2216},
158     Title = {Model for Lamellar Phases of Interacting Lipid Membranes},
159     Volume = 61,
160     Year = 1988}
161 xsun 3147
162     @article{McCullough90,
163 gezelter 3199 Author = {W. Scott McCullough and H. L. Scott},
164     Journal = prl,
165     Number = 7,
166     Pages = {931-934},
167     Title = {Statistical-Mechanial Theory of the Ripple Phase of Lipid Bilayers},
168     Volume = 65,
169     Year = 1990}
170 xsun 3147
171     @article{Banerjee02,
172 gezelter 3199 Author = {Srilekha Banerjee},
173     Journal = {Physica A},
174     Pages = {89-100},
175     Title = {Exploring the Ripple Phase of Biomembranes},
176     Volume = 308,
177     Year = 2002}
178 xsun 3147
179     @article{Sengupta03,
180 gezelter 3199 Author = {Kheya Sengupta and V. A. Raghunathan and John Katsaras},
181     Journal = pre,
182     Number = 031710,
183     Pages = {1-12},
184     Title = {Structure of the Ripple Phase of Phospholipid Multibilayers},
185     Volume = 68,
186     Year = 2003}
187 xsun 3147
188     @article{Mason01,
189 gezelter 3199 Author = {P. C. Mason and J. F. Nagle and R. M. Epand and J. Katsaras},
190     Journal = pre,
191     Number = 030902,
192     Pages = {1-4},
193     Title = {Anomalous Swelling in Phospholipid bilayers is not coupled to the formation of a ripple phase},
194     Volume = 63,
195     Year = 2001}
196 xsun 3147
197     @article{Tieleman96,
198 gezelter 3199 Author = {D. P. Tieleman and H. J. C. Berendsen},
199     Journal = jcp,
200     Number = 11,
201     Pages = {4871-4880},
202     Title = {Molecular Dynamics Simulations of a Fully Hydrated Dipalmitoylphosphatidylcholine Bilayer with Different Macroscopic Boundary Conditions and Parameters},
203     Volume = 105,
204     Year = 1996}
205 xsun 3147
206     @article{Kubica02,
207 gezelter 3199 Author = {Krystian Kubica},
208     Journal = {Computers and Chemistry},
209     Pages = {351-356},
210     Title = {Computer Simulation studies on significance of Lipid Polar Head Oreintation},
211     Volume = 26,
212     Year = 2002}
213 xsun 3147
214     @article{Leidy02,
215 gezelter 3199 Author = {Chad Leidy and Thomas Kaasgaard and John H. Crowe and Ole G. Mouritsen and Kent J\o gensen},
216     Journal = bj,
217     Pages = {2625-2633},
218     Title = {Ripples and the Formation of Anisotropic Lipid Domains: Imaging Two-Component Supported Double Bilayers by Atomic Force Microscopy},
219     Volume = 83,
220     Year = 2002}
221 xsun 3147
222     @article{Misbah98,
223 gezelter 3199 Author = {C. Misbah and J. Duplat and B. Houchmandzadeh},
224     Journal = prl,
225     Number = 20,
226     Pages = {4598-4601},
227     Title = {Transition to Ripple Phases in Hydrated Amphiphiles},
228     Volume = 80,
229     Year = 1998}
230 xsun 3147
231 gezelter 3199 @book{Cevc87,
232     Address = {New York},
233     Author = {Gregor Cevc and Derek Marsh},
234     Publisher = {Wiley-Interscience},
235     Title = {Phospholipid Bilayers},
236     Year = 1980}
237 xsun 3147
238     @article{Copeland80,
239 gezelter 3199 Author = {B. R. Copeland and H. M. McConnell},
240     Journal = {Biochim. Biophys. Acta.},
241     Pages = {95-109},
242     Title = {The Rippled Structure in Bilayer Membranes of Phosphatidylcholine and Binary Mixture of Phosphatidylcholine and Cholesterol},
243     Volume = 599,
244     Year = 1980}
245 xsun 3147
246     @article{Meyer96,
247 gezelter 3199 Author = {H. W. Meyer},
248     Journal = {Biochim. Biophys. Acta.},
249     Pages = {221-245},
250     Title = {Pretansition-Ripples in Bilayers of Dipalmitoylphosphatidylcholine: Undulation or Periodic Segments? A Freeze-Fracture Study},
251     Volume = 1302,
252     Year = 1996}
253 xsun 3147
254 gezelter 3199 @article{Carlson87,
255     Author = {J.~M. Carlson and J.~P. Sethna},
256     Journal = pra,
257     Number = 7,
258     Pages = 3359,
259     Title = {Theory of ripple phase in hydrated phospholipid bilayers},
260     Volume = 36,
261     Year = 1987}
262 xsun 3147
263 gezelter 3199 @article{Marder84,
264     Author = {M. Marder and H.~L. Frisch and J.~S. Langer and H.~M. McConnell},
265     Journal = pnas,
266     Pages = {6559-6561},
267     Title = {Theory of the intermediate rippled phase of phospholipid bilayers},
268     Volume = 81,
269     Year = 1984}
270 xsun 3147
271 gezelter 3199 @article{Bannerjee02,
272     Author = {S. Bannerjee},
273     Journal = {Physica A},
274     Pages = {89-100},
275     Title = {Exploring the ripple phase of biomembranes},
276     Volume = 308,
277     Year = 2002}
278 xsun 3147
279 gezelter 3199 @article{deVries05,
280     Author = {A.~H. de~Vries and S. Yefimov and A.~E. Mark and S.~J. Marrink},
281     Journal = pnas,
282     Number = 15,
283     Pages = {5392-5396},
284     Title = {Molecular structure of the lecithin ripple phase},
285     Volume = 102,
286     Year = 2005}
287 xsun 3147
288 gezelter 3199 @article{Ayton02,
289     Author = {G. Ayton and G.~A. Voth},
290     Journal = {Biophys. J.},
291     Pages = {3357-3370},
292     Title = {Bridging Microscopic and Mesoscopic Simulations of Lipid Bilayers},
293     Volume = 83,
294     Year = 2002}
295 xsun 3147
296 gezelter 3199 @article{Brannigan04b,
297     Author = {G. Brannigan and A.~C. Tamboli and F.~L.~H. Brown},
298     Journal = jcp,
299     Key = 121,
300     Pages = {3259-3271},
301     Title = {The role of molecular shape in bilayer elasticity and phase behavior},
302     Volume = 7,
303     Year = 2004}
304 xsun 3147
305 gezelter 3199 @article{Brannigan04a,
306     Author = {G. Brannigan and F.~L.~H. Brown},
307     Journal = jcp,
308     Number = 2,
309     Pages = {1059-1071},
310     Title = {Solvent-free simulations of fluid membrane bilayers},
311     Volume = 120,
312     Year = 2004}
313 xsun 3147
314 gezelter 3199 @book{Safran94,
315     Address = {Reading, MA},
316     Author = {S.~A. Safran},
317     Publisher = {Addison-Wesley},
318     Title = {Statistical Thermodynamics of Surfaces, Interfaces, and Membranes},
319     Year = 1994}
320 xsun 3147
321 gezelter 3199 @article{Tlusty00,
322     Author = {T. Tlusty and S.~A. Safran},
323     Journal = {Science},
324     Pages = {1328-1331},
325     Title = {Defect-Induced Phase Separation in Dipolar Fluids},
326     Volume = 290,
327     Year = 2000}
328 xsun 3147
329 gezelter 3199 @article{Teixeira00,
330     Author = {P~I~C Teixeira and J~M Tavares and M~M Telo da Gama},
331     Journal = {J. Phys.: Condens. Matter},
332     Pages = {R411-R434},
333     Title = {The effect of dipolar forces on the structure and thermodynamics of classical fluids},
334     Volume = 12,
335     Year = 2000}
336 xsun 3147
337 gezelter 3199 @article{Duncan06,
338     Author = {Peter D. Duncan and Philip J. Camp},
339     Journal = prl,
340     Pages = 107202,
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342     Volume = 97,
343     Year = 2006}
344 xsun 3147
345 gezelter 3199 @article{Tavares02,
346     Author = {J.~M. Tavares and J.~J. Weis and M.~M. Telo da Gama},
347     Journal = pre,
348     Pages = 061201,
349     Title = {Quasi-two-dimensional dipolar fluid at low densities: Monte Carlo simulations and theory},
350     Volume = 65,
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352 xsun 3147
353 gezelter 3199 @article{Duncan04,
354     Author = {Peter D. Duncan and Philip J. Camp},
355     Journal = jcp,
356     Number = 22,
357     Pages = {11322-11331},
358     Title = {Structure and dynamics in monolayer of dipolar spheres},
359     Volume = 121,
360     Year = 2004}
361 xsun 3147
362 gezelter 3199 @article{Holm05,
363     Author = {C. Holm and J.-J. Weis},
364     Journal = {Curr. Opin. Colloid Interface Sci.},
365     Pages = {133-140},
366     Title = {The structure of ferrofluids: A status report},
367     Volume = 10,
368     Year = 2005}
369 xsun 3147
370 gezelter 3199 @article{Jiang04,
371     Author = {F.~Y. Jiang and Y. Bouret and J.~T. Kindt},
372     Journal = {Biophys. J.},
373     Pages = {182-192},
374     Title = {Molecular Dynamics Simulations of the Lipid Bilayer Edge},
375     Volume = 87,
376     Year = 2004}
377 xsun 3147
378 gezelter 3199 @article{deJoannis06,
379     Author = {J. de~Joannis and F.~Y. Jiang and J.~T. Kindt},
380     Journal = {Langmuir},
381     Pages = {998-1005},
382     Title = {Coarse-Grained Model Simulations of Mixed-Lipid Systems: Composition and Line Tension of a Stabilized Bilayer Edge},
383     Volume = 22,
384     Year = 2006}
385 xsun 3147
386 gezelter 3199 @article{Marland1979,
387     Author = {L.~G. Marland and D.~D. Betts},
388     Journal = prl,
389     Number = 21,
390     Pages = {1618-1621},
391     Title = {Frustration Effect in Quantum Spin Systems},
392     Volume = 43,
393     Year = 1979}
394 xsun 3147
395 gezelter 3199 @article{Toulouse1977,
396     Author = {G. Toulouse},
397     Journal = {Commun. Phys.},
398     Number = 4,
399     Pages = {115-119},
400     Title = {Theory of Frustration Effect in Spin-Glasses. I.},
401     Volume = 2,
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403 xsun 3147
404 gezelter 3199 @article{Seifert97,
405     Author = {Udo Seifert},
406     Journal = {Adv. Phys.},
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412 xsun 3147
413     @article{Brodka04,
414     Author = {A. Br\'{o}dka},
415     Date-Added = {2006-04-26 09:41:52 -0400},
416     Date-Modified = {2006-04-26 09:43:52 -0400},
417     Doi = {10.1016/j.cplett.2004.10.086},
418     Journal = {Chem. Phys. Lett.},
419     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Brodka_PointDipoleSlabEwald_04.pdf},
420     Pages = {62-67},
421     Title = {Ewald summation method with electrostatic layer correction for interactions of point dipoles in slab geometry},
422     Volume = {400},
423     Year = {2004}}
424    
425     @article{deJoannis02,
426     Author = {J. {de Joannis} and A. Arnold and C. Holm},
427     Date-Added = {2006-04-26 09:40:15 -0400},
428     Date-Modified = {2006-04-26 09:45:19 -0400},
429 gezelter 3199 Doi = {10.1063/1.149195},
430 xsun 3147 Journal = {J. Chem. Phys.},
431     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Joannis_SlabElectrostatics_02.pdf},
432     Number = {6},
433     Pages = {2503-2512},
434     Title = {Electrostatics in periodic slab geometries. II},
435     Volume = {117},
436     Year = {2002}}
437    
438     @article{Kawata01,
439     Author = {M. Kawata and M. Mikami},
440     Date-Added = {2006-04-26 09:38:01 -0400},
441     Date-Modified = {2006-04-26 09:40:11 -0400},
442     Journal = {Chem. Phys. Lett.},
443     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Kawata_Rapid2DEwald_01.pdf},
444     Pages = {157-164},
445     Title = {Rapid calculation of two-dimensional Ewald summation},
446     Volume = {340},
447     Year = {2001}}
448    
449     @article{Arnold02,
450     Author = {A. Arnold and J. {de Joannis} and C. Holm},
451     Date-Added = {2006-04-26 09:36:09 -0400},
452     Date-Modified = {2006-04-26 09:37:52 -0400},
453 gezelter 3199 Doi = {10.1063/1.149195},
454 xsun 3147 Journal = {J. Chem. Phys.},
455     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Arnold_SlabElectrostatics_02.pdf},
456     Number = {6},
457     Pages = {2496-2502},
458     Title = {Electrostatics in periodic slab geometries. I},
459     Volume = {117},
460     Year = {2002}}
461    
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463     Author = {J. Kolafa and J.~W. Perram},
464     Date-Added = {2006-03-21 09:41:58 -0500},
465     Date-Modified = {2006-03-21 09:42:47 -0500},
466     Journal = {Mol. Simul.},
467     Pages = {351-368},
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469     Volume = {9},
470     Year = {1992}}
471    
472     @article{Karasawa89,
473     Author = {N. Karasawa and W.~A. {Goddard III}},
474     Date-Added = {2006-03-21 09:11:44 -0500},
475     Date-Modified = {2006-03-21 09:13:00 -0500},
476     Journal = {J. Phys. Chem.},
477     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Karasawa_LatticSumConvergence_89.pdf},
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479     Title = {Acceleration of Convergence for Lattice Sums},
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481     Year = {1989}}
482    
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484     Author = {Y.-J. Rhee and J.~W. Halley and J. Hautman and A. Rahman},
485     Date-Added = {2006-03-18 20:48:07 -0500},
486     Date-Modified = {2006-03-18 20:51:09 -0500},
487     Journal = {Phys. Rev. B},
488     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Rhee_finiteDimensionEwald_88.pdf},
489     Number = {1},
490     Pages = {36-42},
491     Title = {Ewald methods in molecular dynamics for systems of finite extent in one of three dimensions},
492     Volume = {40},
493     Year = {1989}}
494    
495     @article{Hunenberger99a,
496     Author = {P.~H. H\"{u}nenberger and J.~A. McCammon},
497     Date-Added = {2006-03-18 20:14:24 -0500},
498     Date-Modified = {2006-03-18 20:16:01 -0500},
499     Journal = {J. Chem. Phys.},
500     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Hunenberger_IonSolutionEwaldArtifacts_99.pdf},
501     Number = {4},
502     Pages = {1856-1872},
503     Title = {Ewald artifacts in computer simulations of ionic solvation and ion -- ion interaction: A continuum electrostatics study},
504     Volume = {110},
505     Year = {1999}}
506    
507     @article{Roberts95,
508     Author = {J.~E. Roberts and J. Schnitker},
509     Date-Added = {2006-03-18 20:12:23 -0500},
510     Date-Modified = {2006-03-18 20:13:36 -0500},
511     Journal = {J. Phys. Chem.},
512     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Roberts_BoundryConditionsIonWater_95.pdf},
513     Pages = {1322-1331},
514     Title = {Boundary Conditions in Sumulations of Aqueous Ionic Solutions: A Systematic Study},
515     Volume = {99},
516     Year = {1995}}
517    
518     @article{Roberts94,
519     Author = {J.~E. Roberts and J. Schnitker},
520     Date-Added = {2006-03-18 20:10:37 -0500},
521     Date-Modified = {2006-03-18 20:12:19 -0500},
522     Journal = {J. Chem. Phys.},
523     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Roberts_IonSolventEwaldProbs_94.pdf},
524     Number = {6},
525     Pages = {5024-5031},
526     Title = {How the unit cell surface charge distriubution affects the energetics of ion-solvent interactions in simulations},
527     Volume = {101},
528     Year = {1994}}
529    
530     @article{Yeh99,
531     Author = {I.-C. Yeh and M.~L. Berkowitz},
532     Date-Added = {2006-03-18 19:24:27 -0500},
533     Date-Modified = {2006-03-18 19:26:08 -0500},
534     Journal = {J. Chem. Phys.},
535     Local-Url = {file://localhost/Users/cfennell/Documents/pdf_files/TheoryTechniques/Ewald/Yeh_SlabCorrectionEwald_99.pdf},
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2641 gezelter 3199 Author = {J. Harden and B. Mbanga and N. Eber and K. Fodor-Csorba and S. Sprunt and J. T. Gleeson and A. Jakli},
2642     Eid = 157802,
2643     Journal = {Physical Review Letters},
2644     Number = 15,
2645     Numpages = 4,
2646     Pages = 157802,
2647     Publisher = {APS},
2648     Title = {Giant Flexoelectricity of Bent-Core Nematic Liquid Crystals},
2649     Volume = 97,
2650     Year = 2006}
2651 xsun 3147
2652 gezelter 3199 @article{Lenz07,
2653     Author = {Olaf Lenz and Friederike Schmid},
2654     Journal = prl,
2655     Number = 5,
2656     Pages = 058104,
2657     Title = {Structure of Symmetric and Asymmetric "Ripple" Phases in Lipid Bilayers},
2658     Volume = 98,
2659     Year = 2007}
2660 xsun 3147
2661 xsun 3174 @article{Sun2007,
2662     Author = {Xiuquan Sun and J. Daniel Gezelter},
2663     Eid = {031602},
2664     Journal = pre,
2665     Keywords = {Lattice Theory; Membranes},
2666     Number = {3},
2667     Numpages = {7},
2668     Pages = {031602},
2669     Publisher = {Aps},
2670     Title = {Spontaneous Corrugation of Dipolar Membranes},
2671     Url = {Http://Link.Aps.Org/Abstract/Pre/V75/E031602},
2672     Volume = {75},
2673 gezelter 3199 Year = {2007}}
2674 xsun 3174
2675 gezelter 3199 @article{Tsonchev04,
2676     Author = {Stefan Tsonchev and George C. Schatz and Mark A. Ratner},
2677     Journal = jpcB,
2678     Pages = {8817-8822},
2679     Title = {Electrostatically-Directed Self-Assembly of Cylindrical Peptide Amphiphile Nanostructures},
2680     Volume = 108,
2681     Year = 2004}
2682 xsun 3174
2683 gezelter 3199 @article{Cleaver96,
2684     Author = {Douglas J. Cleaver and Christopher M. Care and Michael P. Allen and Maureen P. Neal},
2685     Journal = pre,
2686     Number = 1,
2687     Pages = {559-567},
2688     Title = {Extension and generalization of the Gay-Berne potential},
2689     Volume = 54,
2690     Year = 1996}
2691 xsun 3174
2692     @article{Meineke05,
2693     Author = {M.~A. Meineke and C.~F. {Vardeman II} And T. Lin and C.~J. Fennell and J.~D. Gezelter},
2694     Date-Modified = {2007-06-24 09:16:17 -0400},
2695     Journal = jcc,
2696     Pages = {252-271},
2697     Title = {$\Mbox{OOPSE: A}$N Open Source Object-Oriented Parallel Simulation Engine for Molecular Dynamics},
2698     Volume = 26,
2699     Year = 2005}
2700 xsun 3197
2701 gezelter 3199 @article{Tsonchev04II,
2702     Author = {Stefan Tsonchev and Alessandro Troisi and George C. Schatz and Mark A. Ratner},
2703     Journal = jpcB,
2704     Pages = {15278-15284},
2705     Title = {All-Atom Numerical Studies of Self-Assembly of Zwitterionic Peptide Amphiphiles},
2706     Volume = 108,
2707     Year = 2004}
2708 xsun 3197
2709 gezelter 3199 @article{Ayton01,
2710     Author = {Gary Ayton and Scott G. Bardenhagen and Patrick McMurty and Deborah Sulsky and Gregory A. voth},
2711     Journal = jcp,
2712     Number = 15,
2713     Pages = {6913-6924},
2714     Title = {Interfacing continuum and molecular dynamics: An application to lipid bilayers},
2715     Volume = 114,
2716     Year = 2001}
2717 xsun 3197
2718 gezelter 3199 @article{Golubkov06,
2719     Author = {Pavel A. Golubkov and Rengyu Ren},
2720     Journal = jcp,
2721     Pages = 064103,
2722     Title = {Generalized coarse-grained model based on point multipole and Gay-Berne potentials},
2723     Volume = 125,
2724     Year = 2006}