--- trunk/mdRipple/mdripple.tex 2007/07/19 21:20:45 3185 +++ trunk/mdRipple/mdripple.tex 2007/07/19 22:24:21 3186 @@ -114,9 +114,11 @@ water. Every four water molecules are reprsented by on \begin{figure}[htb] \centering -\includegraphics[width=\linewidth]{lipidMM} -\caption{The molecular structure of a DPPC molecule and the -coars-grained model for PC molecules.\label{fig:lipidMM}} +\includegraphics[width=\linewidth]{lipidModels} +\caption{Three different representations of DPPC lipid molecules, +including the chemical structure, an atomistic model, and the +head-body ellipsoidal coarse-grained model used in this +work.\label{fig:lipidModels}} \end{figure} Spheres interact each other with Lennard-Jones potential @@ -214,6 +216,16 @@ shifted at $22$ \AA. the strength parameter is adjusted by the suggestion of \cite{Cleaver96}. All potentials are truncated at $25$ \AA\ and shifted at $22$ \AA. + +\begin{figure}[htb] +\centering +\includegraphics[height=4in]{lipidModel} +\caption{The parameters defining the behavior of the lipid +models. $\sigma_h / \sigma_0$ is the ratio of the head group to body +diameter. Molecular bodies all had an aspect ratio of 3.0. The +dipolar strength (and the temperature and pressure) wer the only other +parameters that wer varied systematically.\label{fig:lipidModel}} +\end{figure} \section{Experiment} \label{sec:experiment}